RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 FBXO41Q8TF61 875 aa12.03□□□□□ -0.48
THUMPD2-203ENST00000460072 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
THUMPD2-203ENST00000460072 FMN1Q68DA7 1419 aa12.02□□□□□ -0.48
THUMPD2-203ENST00000460072 STRCQ7RTU9 1775 aa12.02□□□□□ -0.49
THUMPD2-203ENST00000460072 ZNF142P52746 1687 aaPredicted RBP12.02□□□□□ -0.49
THUMPD2-203ENST00000460072 ATP10AO60312 1499 aa12.01□□□□□ -0.49
THUMPD2-203ENST00000460072 ABCC1P33527 1531 aa12.01□□□□□ -0.49
THUMPD2-203ENST00000460072 ABCA6Q8N139 1617 aa12□□□□□ -0.49
THUMPD2-203ENST00000460072 ZNF518AQ6AHZ1 1483 aa12□□□□□ -0.49
THUMPD2-203ENST00000460072 C3P01024 1663 aa12□□□□□ -0.49
THUMPD2-203ENST00000460072 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
THUMPD2-203ENST00000460072 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
THUMPD2-203ENST00000460072 CCDC18Q5T9S5 1454 aa11.99□□□□□ -0.49
THUMPD2-203ENST00000460072 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
THUMPD2-203ENST00000460072 FAM135AQ9P2D6 1515 aa11.98□□□□□ -0.49
THUMPD2-203ENST00000460072 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
THUMPD2-203ENST00000460072 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
THUMPD2-203ENST00000460072 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
THUMPD2-203ENST00000460072 ARHGAP35Q9NRY4 1499 aa11.97□□□□□ -0.49
THUMPD2-203ENST00000460072 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
THUMPD2-203ENST00000460072 KIDINS220Q9ULH0 1771 aa11.96□□□□□ -0.49
THUMPD2-203ENST00000460072 YEATS2Q9ULM3 1422 aa11.95□□□□□ -0.5
THUMPD2-203ENST00000460072 PLXNC1O60486 1568 aa11.95□□□□□ -0.5
THUMPD2-203ENST00000460072 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
THUMPD2-203ENST00000460072 PTPRTO14522 1441 aa11.93□□□□□ -0.5
THUMPD2-203ENST00000460072 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
THUMPD2-203ENST00000460072 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
THUMPD2-203ENST00000460072 CLIP1P30622 1438 aa11.92□□□□□ -0.5
THUMPD2-203ENST00000460072 FYCO1Q9BQS8 1478 aa11.91□□□□□ -0.5
THUMPD2-203ENST00000460072 SCAPERQ9BY12 1400 aa11.91□□□□□ -0.5
THUMPD2-203ENST00000460072 CNTLNQ9NXG0 1405 aa11.91□□□□□ -0.5
THUMPD2-203ENST00000460072 CASKIN1Q8WXD9 1431 aa11.91□□□□□ -0.5
THUMPD2-203ENST00000460072 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
THUMPD2-203ENST00000460072 NPATQ14207 1427 aa11.9□□□□□ -0.5
THUMPD2-203ENST00000460072 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
THUMPD2-203ENST00000460072 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
THUMPD2-203ENST00000460072 LTBP4Q8N2S1 1624 aa11.87□□□□□ -0.51
THUMPD2-203ENST00000460072 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
THUMPD2-203ENST00000460072 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
THUMPD2-203ENST00000460072 PLA2R1Q13018 1463 aa11.85□□□□□ -0.51
THUMPD2-203ENST00000460072 UHRF1BP1Q6BDS2 1440 aa11.84□□□□□ -0.51
THUMPD2-203ENST00000460072 KIAA1107Q9UPP5 1409 aa11.84□□□□□ -0.51
THUMPD2-203ENST00000460072 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
THUMPD2-203ENST00000460072 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
THUMPD2-203ENST00000460072 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
THUMPD2-203ENST00000460072 NCOA1Q15788 1441 aa11.82□□□□□ -0.52
THUMPD2-203ENST00000460072 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
THUMPD2-203ENST00000460072 P3H3Q8IVL6 736 aa11.82□□□□□ -0.52
THUMPD2-203ENST00000460072 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
THUMPD2-203ENST00000460072 CLTCQ00610 1675 aaKnown RBP11.8□□□□□ -0.52
THUMPD2-203ENST00000460072 TRAPPC8Q9Y2L5 1435 aa11.8□□□□□ -0.52
THUMPD2-203ENST00000460072 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
THUMPD2-203ENST00000460072 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
THUMPD2-203ENST00000460072 SPATA31D1Q6ZQQ2 1576 aa11.78□□□□□ -0.52
THUMPD2-203ENST00000460072 EHBP1L1Q8N3D4 1523 aa11.78□□□□□ -0.52
THUMPD2-203ENST00000460072 CERKQ8TCT0 537 aa11.77□□□□□ -0.52
THUMPD2-203ENST00000460072 CEP170BQ9Y4F5 1589 aaPredicted RBP11.77□□□□□ -0.53
THUMPD2-203ENST00000460072 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
THUMPD2-203ENST00000460072 TCOF1Q13428 1488 aaKnown RBP11.77□□□□□ -0.53
THUMPD2-203ENST00000460072 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
THUMPD2-203ENST00000460072 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.53
THUMPD2-203ENST00000460072 DEPDC5O75140 1603 aa11.76□□□□□ -0.53
THUMPD2-203ENST00000460072 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
THUMPD2-203ENST00000460072 MAST1Q9Y2H9 1570 aa11.76□□□□□ -0.53
THUMPD2-203ENST00000460072 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
THUMPD2-203ENST00000460072 EIF2AK4Q9P2K8 1649 aaKnown RBP11.76□□□□□ -0.53
THUMPD2-203ENST00000460072 RTEL1-TNFRSF6BF6WH68 1400 aa11.76□□□□□ -0.53
THUMPD2-203ENST00000460072 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
THUMPD2-203ENST00000460072 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
THUMPD2-203ENST00000460072 PPP6R1Q9UPN7 881 aa11.74□□□□□ -0.53
THUMPD2-203ENST00000460072 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
THUMPD2-203ENST00000460072 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
THUMPD2-203ENST00000460072 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
THUMPD2-203ENST00000460072 DNMT1P26358 1616 aaKnown RBP11.72□□□□□ -0.53
THUMPD2-203ENST00000460072 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
THUMPD2-203ENST00000460072 A2MP01023 1474 aa11.71□□□□□ -0.53
THUMPD2-203ENST00000460072 SYNMO15061 1565 aa11.71□□□□□ -0.53
THUMPD2-203ENST00000460072 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.54
THUMPD2-203ENST00000460072 NEURL4Q96JN8 1562 aa11.71□□□□□ -0.54
THUMPD2-203ENST00000460072 CPS1P31327 1500 aa11.7□□□□□ -0.54
THUMPD2-203ENST00000460072 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
THUMPD2-203ENST00000460072 A2ML1A8K2U0 1454 aa11.7□□□□□ -0.54
THUMPD2-203ENST00000460072 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
THUMPD2-203ENST00000460072 MBD5Q9P267 1494 aa11.68□□□□□ -0.54
THUMPD2-203ENST00000460072 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
THUMPD2-203ENST00000460072 PZPP20742 1482 aa11.66□□□□□ -0.54
THUMPD2-203ENST00000460072 MED14O60244 1454 aa11.66□□□□□ -0.54
THUMPD2-203ENST00000460072 CROCC2H7BZ55 1655 aa11.66□□□□□ -0.54
THUMPD2-203ENST00000460072 CAMSAP2Q08AD1 1489 aa11.66□□□□□ -0.54
THUMPD2-203ENST00000460072 HSPA2P54652 639 aa11.64□□□□□ -0.55
THUMPD2-203ENST00000460072 VWDEQ8N2E2 1590 aa11.64□□□□□ -0.55
THUMPD2-203ENST00000460072 PKD2Q13563 968 aa11.63□□□□□ -0.55
THUMPD2-203ENST00000460072 NLRP1Q9C000 1473 aa11.63□□□□□ -0.55
THUMPD2-203ENST00000460072 CCDC141Q6ZP82 1450 aa11.62□□□□□ -0.55
THUMPD2-203ENST00000460072 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
THUMPD2-203ENST00000460072 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
THUMPD2-203ENST00000460072 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
THUMPD2-203ENST00000460072 MROH1Q8NDA8 1641 aa11.62□□□□□ -0.55
THUMPD2-203ENST00000460072 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
THUMPD2-203ENST00000460072 DHX29Q7Z478 1369 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms