RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 DAPK1P53355 1430 aa36.48■■■■□ 3.43
U2AF1-204ENST00000459639 ASXL2Q76L83 1435 aa36.48■■■■□ 3.43
U2AF1-204ENST00000459639 ZNF644Q9H582 1327 aaPredicted RBP36.48■■■■□ 3.43
U2AF1-204ENST00000459639 NPM1P06748 294 aaKnown RBP eCLIP36.47■■■■□ 3.43
U2AF1-204ENST00000459639 CROCC2H7BZ55 1655 aa36.46■■■■□ 3.43
U2AF1-204ENST00000459639 KCNH8Q96L42 1107 aa36.45■■■■□ 3.43
U2AF1-204ENST00000459639 HFM1A2PYH4 1435 aa36.44■■■■□ 3.42
U2AF1-204ENST00000459639 AKNAQ7Z591 1439 aa36.44■■■■□ 3.42
U2AF1-204ENST00000459639 RAB3GAP2Q9H2M9 1393 aa36.44■■■■□ 3.42
U2AF1-204ENST00000459639 ZEB1P37275 1124 aaPredicted RBP36.44■■■■□ 3.42
U2AF1-204ENST00000459639 ABCC5O15440 1437 aa36.43■■■■□ 3.42
U2AF1-204ENST00000459639 SAMD9LQ8IVG5 1584 aa36.42■■■■□ 3.42
U2AF1-204ENST00000459639 GCC2Q8IWJ2 1684 aa36.42■■■■□ 3.42
U2AF1-204ENST00000459639 ABCA9Q8IUA7 1624 aa36.42■■■■□ 3.42
U2AF1-204ENST00000459639 ARHGAP5Q13017 1502 aa36.42■■■■□ 3.42
U2AF1-204ENST00000459639 ARAP3Q8WWN8 1544 aa36.4■■■■□ 3.42
U2AF1-204ENST00000459639 ZNF777Q9ULD5 760 aaPredicted RBP36.39■■■■□ 3.42
U2AF1-204ENST00000459639 PLCH2O75038 1416 aa36.38■■■■□ 3.41
U2AF1-204ENST00000459639 ARHGEF5Q12774 1597 aa36.37■■■■□ 3.41
U2AF1-204ENST00000459639 ADGBQ8N7X0 1667 aa36.36■■■■□ 3.41
U2AF1-204ENST00000459639 NAIPQ13075 1403 aa36.35■■■■□ 3.41
U2AF1-204ENST00000459639 ROCK1Q13464 1354 aa36.34■■■■□ 3.41
U2AF1-204ENST00000459639 CYB5RLQ6IPT4 315 aa36.32■■■■□ 3.41
U2AF1-204ENST00000459639 MAPKBP1O60336 1514 aa36.32■■■■□ 3.4
U2AF1-204ENST00000459639 SHANK2Q9UPX8 1470 aa36.31■■■■□ 3.4
U2AF1-204ENST00000459639 PLEKHH2Q8IVE3 1493 aa36.3■■■■□ 3.4
U2AF1-204ENST00000459639 DHX57Q6P158 1386 aaKnown RBP36.29■■■■□ 3.4
U2AF1-204ENST00000459639 MBD5Q9P267 1494 aa36.27■■■■□ 3.4
U2AF1-204ENST00000459639 ADGRL2O95490 1459 aa36.26■■■■□ 3.4
U2AF1-204ENST00000459639 CHIC2Q9UKJ5 165 aa36.26■■■■□ 3.39
U2AF1-204ENST00000459639 SYCP2Q9BX26 1530 aa36.24■■■■□ 3.39
U2AF1-204ENST00000459639 KIAA1107Q9UPP5 1409 aa36.24■■■■□ 3.39
U2AF1-204ENST00000459639 CCDC141Q6ZP82 1450 aa36.23■■■■□ 3.39
U2AF1-204ENST00000459639 EFCAB2Q5VUJ9 269 aa36.2■■■■□ 3.39
U2AF1-204ENST00000459639 ABCC1P33527 1531 aa36.2■■■■□ 3.39
U2AF1-204ENST00000459639 RSPH4AQ5TD94 716 aa36.19■■■■□ 3.38
U2AF1-204ENST00000459639 RRP7BPQ9NSQ0 103 aa36.19■■■■□ 3.38
U2AF1-204ENST00000459639 CLSPNQ9HAW4 1339 aa36.18■■■■□ 3.38
U2AF1-204ENST00000459639 C9orf84Q5VXU9 1444 aa36.16■■■■□ 3.38
U2AF1-204ENST00000459639 MAST1Q9Y2H9 1570 aa36.15■■■■□ 3.38
U2AF1-204ENST00000459639 NCOA1Q15788 1441 aa36.14■■■■□ 3.38
U2AF1-204ENST00000459639 HNRNPMP52272 730 aaKnown RBP eCLIP36.14■■■■□ 3.38
U2AF1-204ENST00000459639 ANKRD30AQ9BXX3 1397 aa36.12■■■■□ 3.37
U2AF1-204ENST00000459639 FANCAO15360 1455 aa36.12■■■■□ 3.37
U2AF1-204ENST00000459639 KDM6BO15054 1643 aa36.11■■■■□ 3.37
U2AF1-204ENST00000459639 ARHGEF12Q9NZN5 1544 aa36.1■■■■□ 3.37
U2AF1-204ENST00000459639 CFAP74Q9C0B2 1584 aa36.08■■■■□ 3.37
U2AF1-204ENST00000459639 TSPY4P0CV99 314 aa36.08■■■■□ 3.37
U2AF1-204ENST00000459639 TSPY10P0CW01 314 aa36.08■■■■□ 3.37
U2AF1-204ENST00000459639 GLI2P10070 1586 aa36.05■■■■□ 3.36
U2AF1-204ENST00000459639 ACIN1Q9UKV3 1341 aaKnown RBP36.05■■■■□ 3.36
U2AF1-204ENST00000459639 CD109Q6YHK3 1445 aa36.04■■■■□ 3.36
U2AF1-204ENST00000459639 MAP3K4Q9Y6R4 1608 aa36.01■■■■□ 3.36
U2AF1-204ENST00000459639 PLXNC1O60486 1568 aa36■■■■□ 3.35
U2AF1-204ENST00000459639 ADGRL1O94910 1474 aa35.97■■■■□ 3.35
U2AF1-204ENST00000459639 DIP2BQ9P265 1576 aa35.96■■■■□ 3.35
U2AF1-204ENST00000459639 TRAPPC8Q9Y2L5 1435 aa35.95■■■■□ 3.35
U2AF1-204ENST00000459639 KIF15Q9NS87 1388 aa35.92■■■■□ 3.34
U2AF1-204ENST00000459639 ANKRD50Q9ULJ7 1429 aa35.92■■■■□ 3.34
U2AF1-204ENST00000459639 NEO1Q92859 1461 aa35.87■■■■□ 3.33
U2AF1-204ENST00000459639 SCAPERQ9BY12 1400 aa35.87■■■■□ 3.33
U2AF1-204ENST00000459639 RTEL1-TNFRSF6BF6WH68 1400 aa35.86■■■■□ 3.33
U2AF1-204ENST00000459639 ZFYVE16Q7Z3T8 1539 aa35.85■■■■□ 3.33
U2AF1-204ENST00000459639 INO80Q9ULG1 1556 aaPredicted RBP35.84■■■■□ 3.33
U2AF1-204ENST00000459639 TRIM52Q96A61 297 aa35.81■■■■□ 3.32
U2AF1-204ENST00000459639 DUOX2Q9NRD8 1548 aa35.8■■■■□ 3.32
U2AF1-204ENST00000459639 ZNF518AQ6AHZ1 1483 aa35.78■■■■□ 3.32
U2AF1-204ENST00000459639 ATP7AQ04656 1500 aa35.78■■■■□ 3.32
U2AF1-204ENST00000459639 SPAG9O60271 1321 aaKnown RBP35.77■■■■□ 3.32
U2AF1-204ENST00000459639 AFAP1Q8N556 730 aa35.75■■■■□ 3.31
U2AF1-204ENST00000459639 DENND4BO75064 1496 aaPredicted RBP35.75■■■■□ 3.31
U2AF1-204ENST00000459639 KIF13AQ9H1H9 1805 aa35.75■■■■□ 3.31
U2AF1-204ENST00000459639 KDM5DQ9BY66 1539 aa35.74■■■■□ 3.31
U2AF1-204ENST00000459639 KDM5CP41229 1560 aa35.74■■■■□ 3.31
U2AF1-204ENST00000459639 POGZQ7Z3K3 1410 aa35.74■■■■□ 3.31
U2AF1-204ENST00000459639 FAM69CQ0P6D2 419 aa35.73■■■■□ 3.31
U2AF1-204ENST00000459639 ERBINQ96RT1 1412 aa35.72■■■■□ 3.31
U2AF1-204ENST00000459639 PPRC1Q5VV67 1664 aaKnown RBP35.71■■■■□ 3.31
U2AF1-204ENST00000459639 PZPP20742 1482 aa35.71■■■■□ 3.31
U2AF1-204ENST00000459639 MPHOSPH9Q99550 1183 aa35.7■■■■□ 3.31
U2AF1-204ENST00000459639 UNC13BO14795 1591 aa35.7■■■■□ 3.3
U2AF1-204ENST00000459639 KIDINS220Q9ULH0 1771 aa35.68■■■■□ 3.3
U2AF1-204ENST00000459639 TSPOAP1O95153 1857 aa35.65■■■■□ 3.3
U2AF1-204ENST00000459639 TEX14Q8IWB6 1497 aa35.64■■■■□ 3.3
U2AF1-204ENST00000459639 HECW2Q9P2P5 1572 aa35.64■■■■□ 3.3
U2AF1-204ENST00000459639 RICTORQ6R327 1708 aa35.63■■■■□ 3.29
U2AF1-204ENST00000459639 MLH3Q9UHC1 1453 aa35.61■■■■□ 3.29
U2AF1-204ENST00000459639 SLC4A1APQ9BWU0 796 aaKnown RBP35.59■■■■□ 3.29
U2AF1-204ENST00000459639 MAGI2Q86UL8 1455 aa35.58■■■■□ 3.29
U2AF1-204ENST00000459639 NUP155O75694 1391 aa35.57■■■■□ 3.29
U2AF1-204ENST00000459639 EIF2AK4Q9P2K8 1649 aaKnown RBP35.57■■■■□ 3.29
U2AF1-204ENST00000459639 SIN3AQ96ST3 1273 aa35.56■■■■□ 3.28
U2AF1-204ENST00000459639 IQGAP3Q86VI3 1631 aa35.54■■■■□ 3.28
U2AF1-204ENST00000459639 FAM135AQ9P2D6 1515 aa35.52■■■■□ 3.28
U2AF1-204ENST00000459639 DEPDC5O75140 1603 aa35.52■■■■□ 3.28
U2AF1-204ENST00000459639 TIMELESSQ9UNS1 1208 aa35.52■■■■□ 3.28
U2AF1-204ENST00000459639 FRMPD1Q5SYB0 1578 aa35.51■■■■□ 3.28
U2AF1-204ENST00000459639 MYT1LQ9UL68 1186 aa35.49■■■■□ 3.27
U2AF1-204ENST00000459639 NEUROD1Q13562 356 aa35.48■■■■□ 3.27
U2AF1-204ENST00000459639 ABCA6Q8N139 1617 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms