RNA–Protein interactions for RNA: ENST00000457242.1

LPP-210, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 2

Gene LPP, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-210ENST00000457242 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
LPP-210ENST00000457242 BIVM-ERCC5R4GMW8 1640 aa11.17□□□□□ -0.62
LPP-210ENST00000457242 TOP2BQ02880 1626 aa11.16□□□□□ -0.62
LPP-210ENST00000457242 CUX1P39880 1505 aa11.15□□□□□ -0.62
LPP-210ENST00000457242 TOPBP1Q92547 1522 aa11.15□□□□□ -0.62
LPP-210ENST00000457242 SYNJ1O43426 1573 aa11.15□□□□□ -0.62
LPP-210ENST00000457242 THOC2Q8NI27 1593 aaKnown RBP11.15□□□□□ -0.62
LPP-210ENST00000457242 WDR62O43379 1518 aa11.14□□□□□ -0.63
LPP-210ENST00000457242 URB2Q14146 1524 aaKnown RBP11.14□□□□□ -0.63
LPP-210ENST00000457242 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
LPP-210ENST00000457242 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
LPP-210ENST00000457242 TRIM41Q8WV44 630 aa11.13□□□□□ -0.63
LPP-210ENST00000457242 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
LPP-210ENST00000457242 FGD5Q6ZNL6 1462 aa11.08□□□□□ -0.64
LPP-210ENST00000457242 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
LPP-210ENST00000457242 POLA1P09884 1462 aaPredicted RBP11.06□□□□□ -0.64
LPP-210ENST00000457242 SOGA1O94964 1423 aa11.03□□□□□ -0.64
LPP-210ENST00000457242 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
LPP-210ENST00000457242 CUX2O14529 1486 aa11.02□□□□□ -0.65
LPP-210ENST00000457242 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
LPP-210ENST00000457242 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
LPP-210ENST00000457242 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
LPP-210ENST00000457242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.02□□□□□ -0.65
LPP-210ENST00000457242 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
LPP-210ENST00000457242 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
LPP-210ENST00000457242 TARBP1Q13395 1621 aaKnown RBP11□□□□□ -0.65
LPP-210ENST00000457242 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
LPP-210ENST00000457242 WDR97A6NE52 1622 aa10.99□□□□□ -0.65
LPP-210ENST00000457242 ZNF467Q7Z7K2 595 aaPredicted RBP10.98□□□□□ -0.65
LPP-210ENST00000457242 EEA1Q15075 1411 aa10.98□□□□□ -0.65
LPP-210ENST00000457242 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
LPP-210ENST00000457242 GOLGA2Q08379 1002 aa10.96□□□□□ -0.65
LPP-210ENST00000457242 PSEN1P49768 467 aa10.95□□□□□ -0.66
LPP-210ENST00000457242 ABCA5Q8WWZ7 1642 aa10.94□□□□□ -0.66
LPP-210ENST00000457242 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
LPP-210ENST00000457242 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
LPP-210ENST00000457242 FKBP8Q14318 412 aa10.92□□□□□ -0.66
LPP-210ENST00000457242 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
LPP-210ENST00000457242 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
LPP-210ENST00000457242 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.66
LPP-210ENST00000457242 RUSC2Q8N2Y8 1516 aa10.9□□□□□ -0.66
LPP-210ENST00000457242 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
LPP-210ENST00000457242 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
LPP-210ENST00000457242 ERICH3Q5RHP9 1530 aa10.89□□□□□ -0.67
LPP-210ENST00000457242 GSE1Q14687 1217 aa10.88□□□□□ -0.67
LPP-210ENST00000457242 PBRM1Q86U86 1689 aa10.88□□□□□ -0.67
LPP-210ENST00000457242 AQRO60306 1485 aaKnown RBP eCLIP10.87□□□□□ -0.67
LPP-210ENST00000457242 GRIN2BQ13224 1484 aa10.87□□□□□ -0.67
LPP-210ENST00000457242 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
LPP-210ENST00000457242 ERBB3P21860 1342 aa10.86□□□□□ -0.67
LPP-210ENST00000457242 CUL7Q14999 1698 aa10.85□□□□□ -0.67
LPP-210ENST00000457242 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
LPP-210ENST00000457242 IGF1RP08069 1367 aa10.85□□□□□ -0.67
LPP-210ENST00000457242 DNAJC5Q9H3Z4 198 aa10.84□□□□□ -0.67
LPP-210ENST00000457242 MAGI1Q96QZ7 1491 aaPredicted RBP10.83□□□□□ -0.68
LPP-210ENST00000457242 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
LPP-210ENST00000457242 PRXQ9BXM0 1461 aa10.82□□□□□ -0.68
LPP-210ENST00000457242 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
LPP-210ENST00000457242 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
LPP-210ENST00000457242 KIF21BO75037 1637 aa10.82□□□□□ -0.68
LPP-210ENST00000457242 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
LPP-210ENST00000457242 VARS2Q5ST30 1063 aaKnown RBP10.81□□□□□ -0.68
LPP-210ENST00000457242 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
LPP-210ENST00000457242 FHAD1B1AJZ9 1412 aa10.81□□□□□ -0.68
LPP-210ENST00000457242 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
LPP-210ENST00000457242 CARMIL1Q5VZK9 1371 aa10.8□□□□□ -0.68
LPP-210ENST00000457242 DOK7Q18PE1 504 aa10.8□□□□□ -0.68
LPP-210ENST00000457242 RAPGEF2Q9Y4G8 1499 aa10.79□□□□□ -0.68
LPP-210ENST00000457242 KLHL34Q8N239 644 aa10.78□□□□□ -0.68
LPP-210ENST00000457242 GOLGA3Q08378 1498 aa10.78□□□□□ -0.68
LPP-210ENST00000457242 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
LPP-210ENST00000457242 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
LPP-210ENST00000457242 G3V3G9 751 aa10.75□□□□□ -0.69
LPP-210ENST00000457242 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
LPP-210ENST00000457242 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
LPP-210ENST00000457242 ZNF687Q8N1G0 1237 aa10.74□□□□□ -0.69
LPP-210ENST00000457242 GRIN2AQ12879 1464 aa10.73□□□□□ -0.69
LPP-210ENST00000457242 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
LPP-210ENST00000457242 CHD1O14646 1710 aa10.71□□□□□ -0.69
LPP-210ENST00000457242 GPR153Q6NV75 609 aa10.71□□□□□ -0.69
LPP-210ENST00000457242 TNIKQ9UKE5 1360 aa10.69□□□□□ -0.7
LPP-210ENST00000457242 UBTFP17480 764 aaKnown RBP10.69□□□□□ -0.7
LPP-210ENST00000457242 CTTNBP2Q8WZ74 1663 aa10.69□□□□□ -0.7
LPP-210ENST00000457242 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
LPP-210ENST00000457242 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
LPP-210ENST00000457242 NUP160Q12769 1436 aa10.67□□□□□ -0.7
LPP-210ENST00000457242 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
LPP-210ENST00000457242 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
LPP-210ENST00000457242 CEP170Q5SW79 1584 aa10.65□□□□□ -0.7
LPP-210ENST00000457242 KIAA0586Q9BVV6 1533 aa10.65□□□□□ -0.7
LPP-210ENST00000457242 MICALL2Q8IY33 904 aa10.65□□□□□ -0.7
LPP-210ENST00000457242 IQGAP2Q13576 1575 aa10.63□□□□□ -0.71
LPP-210ENST00000457242 PTGER2P43116 358 aa10.62□□□□□ -0.71
LPP-210ENST00000457242 CLASP1Q7Z460 1538 aa10.6□□□□□ -0.71
LPP-210ENST00000457242 ANKRD13DQ6ZTN6 518 aa10.6□□□□□ -0.71
LPP-210ENST00000457242 CIZ1Q9ULV3 898 aaPredicted RBP10.6□□□□□ -0.71
LPP-210ENST00000457242 ARSIQ5FYB1 569 aa10.59□□□□□ -0.71
LPP-210ENST00000457242 CEP162Q5TB80 1403 aa10.58□□□□□ -0.72
LPP-210ENST00000457242 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
LPP-210ENST00000457242 UGGT2Q9NYU1 1516 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms