RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 MAGI2Q86UL8 1455 aa23.81■■□□□ 1.4
TSC22D4-204ENST00000456330 PLCH2O75038 1416 aa23.8■■□□□ 1.4
TSC22D4-204ENST00000456330 CASKIN1Q8WXD9 1431 aa23.8■■□□□ 1.4
TSC22D4-204ENST00000456330 FYCO1Q9BQS8 1478 aa23.8■■□□□ 1.4
TSC22D4-204ENST00000456330 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
TSC22D4-204ENST00000456330 POGZQ7Z3K3 1410 aa23.79■■□□□ 1.4
TSC22D4-204ENST00000456330 LMTK3Q96Q04 1460 aa23.79■■□□□ 1.4
TSC22D4-204ENST00000456330 CCDC18Q5T9S5 1454 aa23.78■■□□□ 1.4
TSC22D4-204ENST00000456330 PREX2Q70Z35 1606 aa23.77■■□□□ 1.4
TSC22D4-204ENST00000456330 YEATS2Q9ULM3 1422 aa23.77■■□□□ 1.4
TSC22D4-204ENST00000456330 TROQ12816 1431 aaPredicted RBP23.76■■□□□ 1.39
TSC22D4-204ENST00000456330 CDC42BPAQ5VT25 1732 aa23.76■■□□□ 1.39
TSC22D4-204ENST00000456330 FER1L4A9Z1Z3 1794 aa23.75■■□□□ 1.39
TSC22D4-204ENST00000456330 ARID4BQ4LE39 1312 aaPredicted RBP23.74■■□□□ 1.39
TSC22D4-204ENST00000456330 SCAPERQ9BY12 1400 aa23.71■■□□□ 1.39
TSC22D4-204ENST00000456330 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
TSC22D4-204ENST00000456330 KDM5CP41229 1560 aa23.69■■□□□ 1.38
TSC22D4-204ENST00000456330 CEP162Q5TB80 1403 aa23.68■■□□□ 1.38
TSC22D4-204ENST00000456330 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
TSC22D4-204ENST00000456330 ARHGEF12Q9NZN5 1544 aa23.67■■□□□ 1.38
TSC22D4-204ENST00000456330 ATP10AO60312 1499 aa23.64■■□□□ 1.38
TSC22D4-204ENST00000456330 ZNF518AQ6AHZ1 1483 aa23.64■■□□□ 1.38
TSC22D4-204ENST00000456330 C9orf84Q5VXU9 1444 aa23.64■■□□□ 1.37
TSC22D4-204ENST00000456330 CDK11AQ9UQ88 783 aaPredicted RBP23.62■■□□□ 1.37
TSC22D4-204ENST00000456330 ABCC1P33527 1531 aa23.62■■□□□ 1.37
TSC22D4-204ENST00000456330 REREQ9P2R6 1566 aa23.61■■□□□ 1.37
TSC22D4-204ENST00000456330 EFCAB2Q5VUJ9 269 aa23.6■■□□□ 1.37
TSC22D4-204ENST00000456330 DIP2CQ9Y2E4 1556 aa23.59■■□□□ 1.37
TSC22D4-204ENST00000456330 PREX1Q8TCU6 1659 aa23.58■■□□□ 1.37
TSC22D4-204ENST00000456330 FBXO41Q8TF61 875 aa23.57■■□□□ 1.36
TSC22D4-204ENST00000456330 SAMD9LQ8IVG5 1584 aa23.57■■□□□ 1.36
TSC22D4-204ENST00000456330 ABCA6Q8N139 1617 aa23.56■■□□□ 1.36
TSC22D4-204ENST00000456330 EHBP1L1Q8N3D4 1523 aa23.53■■□□□ 1.36
TSC22D4-204ENST00000456330 MLH3Q9UHC1 1453 aa23.52■■□□□ 1.36
TSC22D4-204ENST00000456330 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
TSC22D4-204ENST00000456330 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
TSC22D4-204ENST00000456330 MLECQ14165 292 aa23.49■■□□□ 1.35
TSC22D4-204ENST00000456330 KIDINS220Q9ULH0 1771 aa23.48■■□□□ 1.35
TSC22D4-204ENST00000456330 HSPA2P54652 639 aa23.48■■□□□ 1.35
TSC22D4-204ENST00000456330 AGLP35573 1532 aa23.48■■□□□ 1.35
TSC22D4-204ENST00000456330 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
TSC22D4-204ENST00000456330 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
TSC22D4-204ENST00000456330 C3P01024 1663 aa23.45■■□□□ 1.34
TSC22D4-204ENST00000456330 GPATCH8Q9UKJ3 1502 aaKnown RBP23.45■■□□□ 1.34
TSC22D4-204ENST00000456330 SETD1BQ9UPS6 1966 aaKnown RBP23.45■■□□□ 1.34
TSC22D4-204ENST00000456330 TRAPPC8Q9Y2L5 1435 aa23.44■■□□□ 1.34
TSC22D4-204ENST00000456330 SUPT6HQ7KZ85 1726 aaKnown RBP23.44■■□□□ 1.34
TSC22D4-204ENST00000456330 STRCQ7RTU9 1775 aa23.42■■□□□ 1.34
TSC22D4-204ENST00000456330 MTUS2Q5JR59 1369 aa23.42■■□□□ 1.34
TSC22D4-204ENST00000456330 PLPPR3Q6T4P5 718 aa23.41■■□□□ 1.34
TSC22D4-204ENST00000456330 INO80Q9ULG1 1556 aaPredicted RBP23.4■■□□□ 1.34
TSC22D4-204ENST00000456330 VPS8Q8N3P4 1428 aa23.39■■□□□ 1.33
TSC22D4-204ENST00000456330 MROH2AA6NES4 1674 aa23.35■■□□□ 1.33
TSC22D4-204ENST00000456330 UHRF1BP1Q6BDS2 1440 aa23.34■■□□□ 1.33
TSC22D4-204ENST00000456330 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
TSC22D4-204ENST00000456330 CCNB3Q8WWL7 1395 aa23.34■■□□□ 1.33
TSC22D4-204ENST00000456330 ATP7AQ04656 1500 aa23.33■■□□□ 1.32
TSC22D4-204ENST00000456330 NCOA2Q15596 1464 aa23.32■■□□□ 1.32
TSC22D4-204ENST00000456330 PLXNC1O60486 1568 aa23.31■■□□□ 1.32
TSC22D4-204ENST00000456330 ZNF777Q9ULD5 760 aaPredicted RBP23.31■■□□□ 1.32
TSC22D4-204ENST00000456330 ADGBQ8N7X0 1667 aa23.3■■□□□ 1.32
TSC22D4-204ENST00000456330 CNTLNQ9NXG0 1405 aa23.29■■□□□ 1.32
TSC22D4-204ENST00000456330 MYT1LQ9UL68 1186 aa23.28■■□□□ 1.32
TSC22D4-204ENST00000456330 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
TSC22D4-204ENST00000456330 PLEKHH2Q8IVE3 1493 aa23.27■■□□□ 1.32
TSC22D4-204ENST00000456330 LRRC9Q6ZRR7 1453 aa23.26■■□□□ 1.31
TSC22D4-204ENST00000456330 CERKQ8TCT0 537 aa23.26■■□□□ 1.31
TSC22D4-204ENST00000456330 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
TSC22D4-204ENST00000456330 CFDP1Q9UEE9 299 aaPredicted RBP23.23■■□□□ 1.31
TSC22D4-204ENST00000456330 HNRNPMP52272 730 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSC22D4-204ENST00000456330 ZNF644Q9H582 1327 aaPredicted RBP23.21■■□□□ 1.31
TSC22D4-204ENST00000456330 PTPRTO14522 1441 aa23.21■■□□□ 1.31
TSC22D4-204ENST00000456330 NPATQ14207 1427 aa23.21■■□□□ 1.31
TSC22D4-204ENST00000456330 CLTCQ00610 1675 aaKnown RBP23.21■■□□□ 1.31
TSC22D4-204ENST00000456330 ZNF142P52746 1687 aaPredicted RBP23.2■■□□□ 1.3
TSC22D4-204ENST00000456330 MAP3K1Q13233 1512 aa23.2■■□□□ 1.3
TSC22D4-204ENST00000456330 MBD5Q9P267 1494 aa23.2■■□□□ 1.3
TSC22D4-204ENST00000456330 DMRT2Q9Y5R5 561 aa23.19■■□□□ 1.3
TSC22D4-204ENST00000456330 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
TSC22D4-204ENST00000456330 A2MP01023 1474 aa23.17■■□□□ 1.3
TSC22D4-204ENST00000456330 NCOA1Q15788 1441 aa23.17■■□□□ 1.3
TSC22D4-204ENST00000456330 MYO3AQ8NEV4 1616 aa23.16■■□□□ 1.3
TSC22D4-204ENST00000456330 ESF1Q9H501 851 aaKnown RBP23.15■■□□□ 1.3
TSC22D4-204ENST00000456330 CCDC141Q6ZP82 1450 aa23.15■■□□□ 1.3
TSC22D4-204ENST00000456330 ARHGEF5Q12774 1597 aa23.14■■□□□ 1.3
TSC22D4-204ENST00000456330 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.29
TSC22D4-204ENST00000456330 CROCC2H7BZ55 1655 aa23.13■■□□□ 1.29
TSC22D4-204ENST00000456330 CAMSAP1Q5T5Y3 1602 aa23.12■■□□□ 1.29
TSC22D4-204ENST00000456330 KANK4Q5T7N3 995 aaPredicted RBP23.11■■□□□ 1.29
TSC22D4-204ENST00000456330 ZMYM3Q14202 1370 aa23.11■■□□□ 1.29
TSC22D4-204ENST00000456330 IQSEC2Q5JU85 1478 aa23.08■■□□□ 1.29
TSC22D4-204ENST00000456330 CEP170BQ9Y4F5 1589 aaPredicted RBP23.08■■□□□ 1.29
TSC22D4-204ENST00000456330 RTEL1-TNFRSF6BF6WH68 1400 aa23.08■■□□□ 1.28
TSC22D4-204ENST00000456330 PTPRKQ15262 1439 aa23.07■■□□□ 1.28
TSC22D4-204ENST00000456330 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
TSC22D4-204ENST00000456330 MAST1Q9Y2H9 1570 aa23.06■■□□□ 1.28
TSC22D4-204ENST00000456330 PLA2R1Q13018 1463 aa23.05■■□□□ 1.28
TSC22D4-204ENST00000456330 PTPN23Q9H3S7 1636 aa23.04■■□□□ 1.28
TSC22D4-204ENST00000456330 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
TSC22D4-204ENST00000456330 TCOF1Q13428 1488 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms