RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 NISCHQ9Y2I1 1504 aa36.29■■■■□ 3.4
TSC22D4-204ENST00000456330 CCDC180Q9P1Z9 1646 aa32.75■■■□□ 2.83
TSC22D4-204ENST00000456330 ABCC9O60706 1549 aa32.6■■■□□ 2.81
TSC22D4-204ENST00000456330 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
TSC22D4-204ENST00000456330 NACADO15069 1562 aa30.88■■■□□ 2.53
TSC22D4-204ENST00000456330 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
TSC22D4-204ENST00000456330 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
TSC22D4-204ENST00000456330 MYO15BQ96JP2 1530 aa30.5■■■□□ 2.47
TSC22D4-204ENST00000456330 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
TSC22D4-204ENST00000456330 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
TSC22D4-204ENST00000456330 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
TSC22D4-204ENST00000456330 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
TSC22D4-204ENST00000456330 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
TSC22D4-204ENST00000456330 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
TSC22D4-204ENST00000456330 SCRIBQ14160 1630 aa29.73■■■□□ 2.35
TSC22D4-204ENST00000456330 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
TSC22D4-204ENST00000456330 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
TSC22D4-204ENST00000456330 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
TSC22D4-204ENST00000456330 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
TSC22D4-204ENST00000456330 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
TSC22D4-204ENST00000456330 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
TSC22D4-204ENST00000456330 HMGXB3Q12766 1538 aa28.33■■■□□ 2.13
TSC22D4-204ENST00000456330 SMARCA2P51531 1590 aa28.31■■■□□ 2.12
TSC22D4-204ENST00000456330 CUX2O14529 1486 aa28.23■■■□□ 2.11
TSC22D4-204ENST00000456330 BAZ1AQ9NRL2 1556 aaPredicted RBP28.19■■■□□ 2.1
TSC22D4-204ENST00000456330 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
TSC22D4-204ENST00000456330 PEG3Q9GZU2 1588 aa28.16■■■□□ 2.1
TSC22D4-204ENST00000456330 ERCC6Q03468 1493 aa28.14■■■□□ 2.09
TSC22D4-204ENST00000456330 BAZ1BQ9UIG0 1483 aaKnown RBP28.06■■■□□ 2.08
TSC22D4-204ENST00000456330 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
TSC22D4-204ENST00000456330 NESP48681 1621 aa28.01■■■□□ 2.07
TSC22D4-204ENST00000456330 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
TSC22D4-204ENST00000456330 THOC2Q8NI27 1593 aaKnown RBP27.89■■■□□ 2.05
TSC22D4-204ENST00000456330 WIZO95785 1651 aa27.81■■■□□ 2.04
TSC22D4-204ENST00000456330 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
TSC22D4-204ENST00000456330 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
TSC22D4-204ENST00000456330 CADPSQ9ULU8 1353 aa27.54■■■□□ 2
TSC22D4-204ENST00000456330 RSF1Q96T23 1441 aaPredicted RBP27.47■■□□□ 1.99
TSC22D4-204ENST00000456330 WDR62O43379 1518 aa27.45■■□□□ 1.98
TSC22D4-204ENST00000456330 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
TSC22D4-204ENST00000456330 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
TSC22D4-204ENST00000456330 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
TSC22D4-204ENST00000456330 CFTRP13569 1480 aa27.27■■□□□ 1.96
TSC22D4-204ENST00000456330 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
TSC22D4-204ENST00000456330 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
TSC22D4-204ENST00000456330 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
TSC22D4-204ENST00000456330 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
TSC22D4-204ENST00000456330 TRIM41Q8WV44 630 aa26.78■■□□□ 1.88
TSC22D4-204ENST00000456330 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
TSC22D4-204ENST00000456330 TOPBP1Q92547 1522 aa26.75■■□□□ 1.87
TSC22D4-204ENST00000456330 OSCARQ8IYS5 282 aa26.74■■□□□ 1.87
TSC22D4-204ENST00000456330 ZNF608Q9ULD9 1512 aaPredicted RBP26.72■■□□□ 1.87
TSC22D4-204ENST00000456330 DNMBPQ6XZF7 1577 aa26.7■■□□□ 1.86
TSC22D4-204ENST00000456330 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
TSC22D4-204ENST00000456330 EIF4G3O43432 1585 aaKnown RBP26.66■■□□□ 1.86
TSC22D4-204ENST00000456330 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
TSC22D4-204ENST00000456330 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
TSC22D4-204ENST00000456330 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
TSC22D4-204ENST00000456330 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
TSC22D4-204ENST00000456330 CHD1O14646 1710 aa26.5■■□□□ 1.83
TSC22D4-204ENST00000456330 POLA1P09884 1462 aaPredicted RBP26.49■■□□□ 1.83
TSC22D4-204ENST00000456330 ARHGEF11O15085 1522 aa26.48■■□□□ 1.83
TSC22D4-204ENST00000456330 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
TSC22D4-204ENST00000456330 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.826e-11■■■■□ 23.2
TSC22D4-204ENST00000456330 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
TSC22D4-204ENST00000456330 CUX1P39880 1505 aa26.33■■□□□ 1.81
TSC22D4-204ENST00000456330 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
TSC22D4-204ENST00000456330 FGD5Q6ZNL6 1462 aa26.29■■□□□ 1.8
TSC22D4-204ENST00000456330 SOGA1O94964 1423 aa26.27■■□□□ 1.8
TSC22D4-204ENST00000456330 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
TSC22D4-204ENST00000456330 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
TSC22D4-204ENST00000456330 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
TSC22D4-204ENST00000456330 CLASP1Q7Z460 1538 aa26.19■■□□□ 1.78
TSC22D4-204ENST00000456330 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
TSC22D4-204ENST00000456330 PBRM1Q86U86 1689 aa26.12■■□□□ 1.77
TSC22D4-204ENST00000456330 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
TSC22D4-204ENST00000456330 FBLN2P98095 1184 aa26.1■■□□□ 1.77
TSC22D4-204ENST00000456330 SYNJ1O43426 1573 aa26.1■■□□□ 1.77
TSC22D4-204ENST00000456330 CYB5RLQ6IPT4 315 aa26.09■■□□□ 1.77
TSC22D4-204ENST00000456330 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
TSC22D4-204ENST00000456330 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
TSC22D4-204ENST00000456330 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
TSC22D4-204ENST00000456330 ABCA10Q8WWZ4 1543 aa26.02■■□□□ 1.76
TSC22D4-204ENST00000456330 TOP2BQ02880 1626 aa26.01■■□□□ 1.75
TSC22D4-204ENST00000456330 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
TSC22D4-204ENST00000456330 CHMP7Q8WUX9 453 aaPredicted RBP25.95■■□□□ 1.74
TSC22D4-204ENST00000456330 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
TSC22D4-204ENST00000456330 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
TSC22D4-204ENST00000456330 GRIN2AQ12879 1464 aa25.8■■□□□ 1.72
TSC22D4-204ENST00000456330 TRHP20396 242 aaPredicted RBP25.77■■□□□ 1.72
TSC22D4-204ENST00000456330 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
TSC22D4-204ENST00000456330 NUP160Q12769 1436 aa25.74■■□□□ 1.71
TSC22D4-204ENST00000456330 SHROOM2Q13796 1616 aa25.72■■□□□ 1.71
TSC22D4-204ENST00000456330 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
TSC22D4-204ENST00000456330 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
TSC22D4-204ENST00000456330 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
TSC22D4-204ENST00000456330 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
TSC22D4-204ENST00000456330 CUL7Q14999 1698 aa25.44■■□□□ 1.66
TSC22D4-204ENST00000456330 KIF13AQ9H1H9 1805 aa25.42■■□□□ 1.66
TSC22D4-204ENST00000456330 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms