RNA–Protein interactions for RNA: ENST00000455830.2

CRAT-206, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-206ENST00000455830 SCAPERQ9BY12 1400 aa34.76■■■■□ 3.16
CRAT-206ENST00000455830 SIGLEC1Q9BZZ2 1709 aa34.75■■■■□ 3.15
CRAT-206ENST00000455830 TROQ12816 1431 aaPredicted RBP34.75■■■■□ 3.15
CRAT-206ENST00000455830 MAGI2Q86UL8 1455 aa34.75■■■■□ 3.15
CRAT-206ENST00000455830 ILDR1Q86SU0 546 aaPredicted RBP34.72■■■■□ 3.15
CRAT-206ENST00000455830 RIMS1Q86UR5 1692 aaKnown RBP34.72■■■■□ 3.15
CRAT-206ENST00000455830 PCF11O94913 1555 aaKnown RBP34.69■■■■□ 3.14
CRAT-206ENST00000455830 CLIP1P30622 1438 aa34.68■■■■□ 3.14
CRAT-206ENST00000455830 EFCAB2Q5VUJ9 269 aa34.68■■■■□ 3.14
CRAT-206ENST00000455830 CASKIN1Q8WXD9 1431 aa34.64■■■■□ 3.14
CRAT-206ENST00000455830 ARHGAP5Q13017 1502 aa34.64■■■■□ 3.14
CRAT-206ENST00000455830 CCDC18Q5T9S5 1454 aa34.6■■■■□ 3.13
CRAT-206ENST00000455830 CDC42BPBQ9Y5S2 1711 aa34.58■■■■□ 3.13
CRAT-206ENST00000455830 ATP10AO60312 1499 aa34.56■■■■□ 3.12
CRAT-206ENST00000455830 ZNF518AQ6AHZ1 1483 aa34.56■■■■□ 3.12
CRAT-206ENST00000455830 LMTK3Q96Q04 1460 aa34.56■■■■□ 3.12
CRAT-206ENST00000455830 KDM5CP41229 1560 aa34.54■■■■□ 3.12
CRAT-206ENST00000455830 C9orf84Q5VXU9 1444 aa34.54■■■■□ 3.12
CRAT-206ENST00000455830 FER1L4A9Z1Z3 1794 aa34.54■■■■□ 3.12
CRAT-206ENST00000455830 MLECQ14165 292 aa34.53■■■■□ 3.12
CRAT-206ENST00000455830 PREX2Q70Z35 1606 aa34.52■■■■□ 3.12
CRAT-206ENST00000455830 FYCO1Q9BQS8 1478 aa34.52■■■■□ 3.12
CRAT-206ENST00000455830 AFAP1Q8N556 730 aa34.49■■■■□ 3.11
CRAT-206ENST00000455830 PLPPR3Q6T4P5 718 aa34.48■■■■□ 3.11
CRAT-206ENST00000455830 ARHGEF12Q9NZN5 1544 aa34.47■■■■□ 3.11
CRAT-206ENST00000455830 ABCC1P33527 1531 aa34.45■■■■□ 3.1
CRAT-206ENST00000455830 CDC42BPAQ5VT25 1732 aa34.44■■■■□ 3.1
CRAT-206ENST00000455830 DIP2CQ9Y2E4 1556 aa34.42■■■■□ 3.1
CRAT-206ENST00000455830 ITSN2Q9NZM3 1697 aa34.41■■■■□ 3.1
CRAT-206ENST00000455830 TRAPPC8Q9Y2L5 1435 aa34.38■■■■□ 3.09
CRAT-206ENST00000455830 ABCA6Q8N139 1617 aa34.38■■■■□ 3.09
CRAT-206ENST00000455830 MLH3Q9UHC1 1453 aa34.38■■■■□ 3.09
CRAT-206ENST00000455830 MYT1LQ9UL68 1186 aa34.37■■■■□ 3.09
CRAT-206ENST00000455830 REREQ9P2R6 1566 aa34.36■■■■□ 3.09
CRAT-206ENST00000455830 HSPA2P54652 639 aa34.34■■■■□ 3.09
CRAT-206ENST00000455830 SAMD9LQ8IVG5 1584 aa34.28■■■■□ 3.08
CRAT-206ENST00000455830 KIDINS220Q9ULH0 1771 aa34.28■■■■□ 3.08
CRAT-206ENST00000455830 GPATCH8Q9UKJ3 1502 aaKnown RBP34.27■■■■□ 3.08
CRAT-206ENST00000455830 CEBPAP49715 358 aaPredicted RBP34.24■■■■□ 3.07
CRAT-206ENST00000455830 PREX1Q8TCU6 1659 aa34.24■■■■□ 3.07
CRAT-206ENST00000455830 AGLP35573 1532 aa34.23■■■■□ 3.07
CRAT-206ENST00000455830 SYCP2Q9BX26 1530 aa34.22■■■■□ 3.07
CRAT-206ENST00000455830 ZNF777Q9ULD5 760 aaPredicted RBP34.22■■■■□ 3.07
CRAT-206ENST00000455830 FBXO41Q8TF61 875 aa34.19■■■■□ 3.06
CRAT-206ENST00000455830 MTUS2Q5JR59 1369 aa34.15■■■■□ 3.06
CRAT-206ENST00000455830 C3P01024 1663 aa34.14■■■■□ 3.06
CRAT-206ENST00000455830 CCNB3Q8WWL7 1395 aa34.12■■■■□ 3.05
CRAT-206ENST00000455830 HNRNPMP52272 730 aaKnown RBP eCLIP34.12■■■■□ 3.05
CRAT-206ENST00000455830 CFDP1Q9UEE9 299 aaPredicted RBP34.11■■■■□ 3.05
CRAT-206ENST00000455830 CEP162Q5TB80 1403 aa34.11■■■■□ 3.05
CRAT-206ENST00000455830 KIAA1107Q9UPP5 1409 aa34.1■■■■□ 3.05
CRAT-206ENST00000455830 PLEKHH2Q8IVE3 1493 aa34.09■■■■□ 3.05
CRAT-206ENST00000455830 SPAG9O60271 1321 aaKnown RBP34.08■■■■□ 3.05
CRAT-206ENST00000455830 EHBP1L1Q8N3D4 1523 aa34.08■■■■□ 3.05
CRAT-206ENST00000455830 UHRF1BP1Q6BDS2 1440 aa34.07■■■■□ 3.04
CRAT-206ENST00000455830 SETD1BQ9UPS6 1966 aaKnown RBP34.07■■■■□ 3.04
CRAT-206ENST00000455830 TIAM1Q13009 1591 aa34.06■■■■□ 3.04
CRAT-206ENST00000455830 ATP7AQ04656 1500 aa34.06■■■■□ 3.04
CRAT-206ENST00000455830 INO80Q9ULG1 1556 aaPredicted RBP34.06■■■■□ 3.04
CRAT-206ENST00000455830 ESF1Q9H501 851 aaKnown RBP34.04■■■■□ 3.04
CRAT-206ENST00000455830 SUPT6HQ7KZ85 1726 aaKnown RBP34.02■■■■□ 3.04
CRAT-206ENST00000455830 CNTLNQ9NXG0 1405 aa34.01■■■■□ 3.03
CRAT-206ENST00000455830 STRCQ7RTU9 1775 aa34■■■■□ 3.03
CRAT-206ENST00000455830 PLXNC1O60486 1568 aa33.98■■■■□ 3.03
CRAT-206ENST00000455830 MROH2AA6NES4 1674 aa33.95■■■■□ 3.03
CRAT-206ENST00000455830 ZNF644Q9H582 1327 aaPredicted RBP33.95■■■■□ 3.03
CRAT-206ENST00000455830 A2MP01023 1474 aa33.95■■■■□ 3.02
CRAT-206ENST00000455830 MBD5Q9P267 1494 aa33.92■■■■□ 3.02
CRAT-206ENST00000455830 ADGBQ8N7X0 1667 aa33.89■■■■□ 3.02
CRAT-206ENST00000455830 CERKQ8TCT0 537 aa33.88■■■■□ 3.01
CRAT-206ENST00000455830 CLTCQ00610 1675 aaKnown RBP33.87■■■■□ 3.01
CRAT-206ENST00000455830 NCOA2Q15596 1464 aa33.86■■■■□ 3.01
CRAT-206ENST00000455830 ZMYM3Q14202 1370 aa33.85■■■■□ 3.01
CRAT-206ENST00000455830 DMRT2Q9Y5R5 561 aa33.85■■■■□ 3.01
CRAT-206ENST00000455830 NPATQ14207 1427 aa33.84■■■■□ 3.01
CRAT-206ENST00000455830 RTEL1-TNFRSF6BF6WH68 1400 aa33.8■■■■□ 3
CRAT-206ENST00000455830 GGT6Q6P531 493 aa33.79■■■■□ 3
CRAT-206ENST00000455830 CAMSAP2Q08AD1 1489 aa33.78■■■■□ 3
CRAT-206ENST00000455830 LOC105371045A0A1W2PR82 267 aa33.77■■■■□ 3
CRAT-206ENST00000455830 PTPRTO14522 1441 aa33.77■■■■□ 3
CRAT-206ENST00000455830 NCOA1Q15788 1441 aa33.76■■■□□ 2.99
CRAT-206ENST00000455830 VPS8Q8N3P4 1428 aa33.76■■■□□ 2.99
CRAT-206ENST00000455830 CCDC141Q6ZP82 1450 aa33.76■■■□□ 2.99
CRAT-206ENST00000455830 MYO3AQ8NEV4 1616 aa33.72■■■□□ 2.99
CRAT-206ENST00000455830 CAMSAP1Q5T5Y3 1602 aa33.71■■■□□ 2.99
CRAT-206ENST00000455830 PTPRKQ15262 1439 aa33.71■■■□□ 2.99
CRAT-206ENST00000455830 DHX29Q7Z478 1369 aaKnown RBP33.71■■■□□ 2.99
CRAT-206ENST00000455830 LRRC9Q6ZRR7 1453 aa33.69■■■□□ 2.98
CRAT-206ENST00000455830 ZNF142P52746 1687 aaPredicted RBP33.69■■■□□ 2.98
CRAT-206ENST00000455830 PPP6R1Q9UPN7 881 aa33.69■■■□□ 2.98
CRAT-206ENST00000455830 ARHGEF5Q12774 1597 aa33.65■■■□□ 2.98
CRAT-206ENST00000455830 RSPH4AQ5TD94 716 aa33.64■■■□□ 2.98
CRAT-206ENST00000455830 CEP170BQ9Y4F5 1589 aaPredicted RBP33.64■■■□□ 2.98
CRAT-206ENST00000455830 LTBP4Q8N2S1 1624 aa33.6■■■□□ 2.97
CRAT-206ENST00000455830 KIF3BO15066 747 aa33.59■■■□□ 2.97
CRAT-206ENST00000455830 MAP3K1Q13233 1512 aa33.58■■■□□ 2.97
CRAT-206ENST00000455830 PLA2R1Q13018 1463 aa33.56■■■□□ 2.96
CRAT-206ENST00000455830 KANK4Q5T7N3 995 aaPredicted RBP33.56■■■□□ 2.96
CRAT-206ENST00000455830 NCKAP5LQ9HCH0 1330 aa33.55■■■□□ 2.96
CRAT-206ENST00000455830 KDM5DQ9BY66 1539 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms