RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
ECHDC1-210ENST00000454859 HNRNPUL2Q1KMD3 747 aaKnown RBP10.16□□□□□ -0.78
ECHDC1-210ENST00000454859 ERCC6L2Q5T890 1561 aa10.16□□□□□ -0.78
ECHDC1-210ENST00000454859 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
ECHDC1-210ENST00000454859 CROCC2H7BZ55 1655 aa10.16□□□□□ -0.78
ECHDC1-210ENST00000454859 SHANK2Q9UPX8 1470 aa10.16□□□□□ -0.78
ECHDC1-210ENST00000454859 MYO5CQ9NQX4 1742 aa10.15□□□□□ -0.78
ECHDC1-210ENST00000454859 FAM50AQ14320 339 aaKnown RBP10.15□□□□□ -0.79
ECHDC1-210ENST00000454859 ADGRL2O95490 1459 aa10.13□□□□□ -0.79
ECHDC1-210ENST00000454859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
ECHDC1-210ENST00000454859 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
ECHDC1-210ENST00000454859 DAPK1P53355 1430 aa10.12□□□□□ -0.79
ECHDC1-210ENST00000454859 KIAA1107Q9UPP5 1409 aa10.12□□□□□ -0.79
ECHDC1-210ENST00000454859 RAB3GAP2Q9H2M9 1393 aa10.11□□□□□ -0.79
ECHDC1-210ENST00000454859 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
ECHDC1-210ENST00000454859 MAST1Q9Y2H9 1570 aa10.11□□□□□ -0.79
ECHDC1-210ENST00000454859 DHX57Q6P158 1386 aaKnown RBP10.11□□□□□ -0.79
ECHDC1-210ENST00000454859 CFDP1Q9UEE9 299 aaPredicted RBP10.11□□□□□ -0.79
ECHDC1-210ENST00000454859 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
ECHDC1-210ENST00000454859 NAIPQ13075 1403 aa10.1□□□□□ -0.79
ECHDC1-210ENST00000454859 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.1□□□□□ -0.79
ECHDC1-210ENST00000454859 ABCA9Q8IUA7 1624 aa10.09□□□□□ -0.79
ECHDC1-210ENST00000454859 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
ECHDC1-210ENST00000454859 ABCC5O15440 1437 aa10.09□□□□□ -0.79
ECHDC1-210ENST00000454859 PLCH2O75038 1416 aa10.08□□□□□ -0.8
ECHDC1-210ENST00000454859 CFAP74Q9C0B2 1584 aa10.08□□□□□ -0.8
ECHDC1-210ENST00000454859 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
ECHDC1-210ENST00000454859 TTC37Q6PGP7 1564 aa10.06□□□□□ -0.8
ECHDC1-210ENST00000454859 ANKRD30AQ9BXX3 1397 aa10.06□□□□□ -0.8
ECHDC1-210ENST00000454859 SAMD9LQ8IVG5 1584 aa10.06□□□□□ -0.8
ECHDC1-210ENST00000454859 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
ECHDC1-210ENST00000454859 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
ECHDC1-210ENST00000454859 MAPKBP1O60336 1514 aa10.05□□□□□ -0.8
ECHDC1-210ENST00000454859 MBD5Q9P267 1494 aa10.04□□□□□ -0.8
ECHDC1-210ENST00000454859 NCOA1Q15788 1441 aa10.04□□□□□ -0.8
ECHDC1-210ENST00000454859 ARHGAP5Q13017 1502 aa10.04□□□□□ -0.8
ECHDC1-210ENST00000454859 NPM1P06748 294 aaKnown RBP eCLIP10.04□□□□□ -0.8
ECHDC1-210ENST00000454859 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.8
ECHDC1-210ENST00000454859 ABCC1P33527 1531 aa10.02□□□□□ -0.81
ECHDC1-210ENST00000454859 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.81
ECHDC1-210ENST00000454859 RTEL1-TNFRSF6BF6WH68 1400 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 ITGAEP38570 1179 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 GLI2P10070 1586 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 C9orf84Q5VXU9 1444 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 ASXL2Q76L83 1435 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 TSPY4P0CV99 314 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 TSPY10P0CW01 314 aa10.01□□□□□ -0.81
ECHDC1-210ENST00000454859 ARID3CA6NKF2 412 aa10□□□□□ -0.81
ECHDC1-210ENST00000454859 RIMBP3CA6NJZ7 1639 aa9.99□□□□□ -0.81
ECHDC1-210ENST00000454859 RIMBP3BA6NNM3 1639 aa9.99□□□□□ -0.81
ECHDC1-210ENST00000454859 RIMBP3Q9UFD9 1639 aa9.99□□□□□ -0.81
ECHDC1-210ENST00000454859 DUOX2Q9NRD8 1548 aa9.98□□□□□ -0.81
ECHDC1-210ENST00000454859 SYCP2Q9BX26 1530 aa9.97□□□□□ -0.81
ECHDC1-210ENST00000454859 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.81
ECHDC1-210ENST00000454859 NEO1Q92859 1461 aa9.96□□□□□ -0.81
ECHDC1-210ENST00000454859 ERBINQ96RT1 1412 aa9.96□□□□□ -0.81
ECHDC1-210ENST00000454859 ANKRD50Q9ULJ7 1429 aa9.96□□□□□ -0.81
ECHDC1-210ENST00000454859 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.82
ECHDC1-210ENST00000454859 UNC13BO14795 1591 aa9.96□□□□□ -0.82
ECHDC1-210ENST00000454859 PPP6R1Q9UPN7 881 aa9.95□□□□□ -0.82
ECHDC1-210ENST00000454859 EIF2AK4Q9P2K8 1649 aaKnown RBP9.95□□□□□ -0.82
ECHDC1-210ENST00000454859 FANCAO15360 1455 aa9.95□□□□□ -0.82
ECHDC1-210ENST00000454859 MAP3K4Q9Y6R4 1608 aa9.94□□□□□ -0.82
ECHDC1-210ENST00000454859 INO80Q9ULG1 1556 aaPredicted RBP9.94□□□□□ -0.82
ECHDC1-210ENST00000454859 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
ECHDC1-210ENST00000454859 KIF15Q9NS87 1388 aa9.93□□□□□ -0.82
ECHDC1-210ENST00000454859 KDM6BO15054 1643 aa9.93□□□□□ -0.82
ECHDC1-210ENST00000454859 MAGI2Q86UL8 1455 aa9.93□□□□□ -0.82
ECHDC1-210ENST00000454859 RRP7BPQ9NSQ0 103 aa9.92□□□□□ -0.82
ECHDC1-210ENST00000454859 BCORL1Q5H9F3 1711 aa9.92□□□□□ -0.82
ECHDC1-210ENST00000454859 ADRA2BP18089 450 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 IQGAP3Q86VI3 1631 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 KCNH8Q96L42 1107 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 KDM5CP41229 1560 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 ZFYVE16Q7Z3T8 1539 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
ECHDC1-210ENST00000454859 MPHOSPH9Q99550 1183 aa9.9□□□□□ -0.82
ECHDC1-210ENST00000454859 CHIC2Q9UKJ5 165 aa9.9□□□□□ -0.82
ECHDC1-210ENST00000454859 ARHGEF12Q9NZN5 1544 aa9.9□□□□□ -0.82
ECHDC1-210ENST00000454859 ADGRL1O94910 1474 aa9.9□□□□□ -0.82
ECHDC1-210ENST00000454859 PZPP20742 1482 aa9.9□□□□□ -0.82
ECHDC1-210ENST00000454859 DEPDC5O75140 1603 aa9.9□□□□□ -0.82
ECHDC1-210ENST00000454859 ATP7AQ04656 1500 aa9.89□□□□□ -0.83
ECHDC1-210ENST00000454859 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.833e-8■■■■■ 29
ECHDC1-210ENST00000454859 MLH3Q9UHC1 1453 aa9.89□□□□□ -0.83
ECHDC1-210ENST00000454859 ANKRD30BQ9BXX2 1392 aa9.88□□□□□ -0.83
ECHDC1-210ENST00000454859 DENND4BO75064 1496 aaPredicted RBP9.88□□□□□ -0.83
ECHDC1-210ENST00000454859 RPRD2Q5VT52 1461 aaKnown RBP9.88□□□□□ -0.83
ECHDC1-210ENST00000454859 TEX14Q8IWB6 1497 aa9.87□□□□□ -0.83
ECHDC1-210ENST00000454859 TRIM52Q96A61 297 aa9.87□□□□□ -0.83
ECHDC1-210ENST00000454859 ATP10AO60312 1499 aa9.87□□□□□ -0.83
ECHDC1-210ENST00000454859 DIP2BQ9P265 1576 aa9.87□□□□□ -0.83
ECHDC1-210ENST00000454859 SPAG9O60271 1321 aaKnown RBP9.87□□□□□ -0.83
ECHDC1-210ENST00000454859 POGZQ7Z3K3 1410 aa9.86□□□□□ -0.83
ECHDC1-210ENST00000454859 SCAPERQ9BY12 1400 aa9.86□□□□□ -0.83
ECHDC1-210ENST00000454859 TRAPPC8Q9Y2L5 1435 aa9.86□□□□□ -0.83
ECHDC1-210ENST00000454859 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
ECHDC1-210ENST00000454859 TONSLQ96HA7 1378 aa9.86□□□□□ -0.83
ECHDC1-210ENST00000454859 HECW2Q9P2P5 1572 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms