RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ARHGEF40Q8TER5 1519 aa17.13■□□□□ 0.33
DDX39A-203ENST00000454233 POGZQ7Z3K3 1410 aa17.13■□□□□ 0.33
DDX39A-203ENST00000454233 ZMYM4Q5VZL5 1548 aa17.12■□□□□ 0.33
DDX39A-203ENST00000454233 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
DDX39A-203ENST00000454233 ZFYVE16Q7Z3T8 1539 aa17.1■□□□□ 0.33
DDX39A-203ENST00000454233 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
DDX39A-203ENST00000454233 CDC42BPBQ9Y5S2 1711 aa17.07■□□□□ 0.32
DDX39A-203ENST00000454233 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
DDX39A-203ENST00000454233 ZNF518AQ6AHZ1 1483 aa17.07■□□□□ 0.32
DDX39A-203ENST00000454233 YEATS2Q9ULM3 1422 aa17.07■□□□□ 0.32
DDX39A-203ENST00000454233 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
DDX39A-203ENST00000454233 ADAMTSL3P82987 1691 aa17.05■□□□□ 0.32
DDX39A-203ENST00000454233 MYT1LQ9UL68 1186 aa17.05■□□□□ 0.32
DDX39A-203ENST00000454233 BCORL1Q5H9F3 1711 aa17.04■□□□□ 0.32
DDX39A-203ENST00000454233 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
DDX39A-203ENST00000454233 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
DDX39A-203ENST00000454233 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.31
DDX39A-203ENST00000454233 ATP10AO60312 1499 aa17.01■□□□□ 0.31
DDX39A-203ENST00000454233 PTPRMP28827 1452 aa17.01■□□□□ 0.31
DDX39A-203ENST00000454233 ZNF777Q9ULD5 760 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-203ENST00000454233 KDM5CP41229 1560 aa17.01■□□□□ 0.31
DDX39A-203ENST00000454233 ABCC1P33527 1531 aa17.01■□□□□ 0.31
DDX39A-203ENST00000454233 GPATCH8Q9UKJ3 1502 aaKnown RBP17.01■□□□□ 0.31
DDX39A-203ENST00000454233 C9orf84Q5VXU9 1444 aa17■□□□□ 0.31
DDX39A-203ENST00000454233 CFDP1Q9UEE9 299 aaPredicted RBP16.99■□□□□ 0.31
DDX39A-203ENST00000454233 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
DDX39A-203ENST00000454233 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
DDX39A-203ENST00000454233 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
DDX39A-203ENST00000454233 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
DDX39A-203ENST00000454233 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
DDX39A-203ENST00000454233 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
DDX39A-203ENST00000454233 MLECQ14165 292 aa16.97■□□□□ 0.31
DDX39A-203ENST00000454233 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
DDX39A-203ENST00000454233 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
DDX39A-203ENST00000454233 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
DDX39A-203ENST00000454233 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
DDX39A-203ENST00000454233 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
DDX39A-203ENST00000454233 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
DDX39A-203ENST00000454233 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
DDX39A-203ENST00000454233 HNRNPMP52272 730 aaKnown RBP eCLIP16.93■□□□□ 0.35e-8■■■■□ 23.8
DDX39A-203ENST00000454233 DIP2CQ9Y2E4 1556 aa16.93■□□□□ 0.3
DDX39A-203ENST00000454233 KIAA1107Q9UPP5 1409 aa16.92■□□□□ 0.3
DDX39A-203ENST00000454233 TIAM1Q13009 1591 aa16.91■□□□□ 0.3
DDX39A-203ENST00000454233 ABCA6Q8N139 1617 aa16.91■□□□□ 0.3
DDX39A-203ENST00000454233 SPAG9O60271 1321 aaKnown RBP16.91■□□□□ 0.3
DDX39A-203ENST00000454233 REREQ9P2R6 1566 aa16.9■□□□□ 0.3
DDX39A-203ENST00000454233 SUPT6HQ7KZ85 1726 aaKnown RBP16.9■□□□□ 0.3
DDX39A-203ENST00000454233 FER1L4A9Z1Z3 1794 aa16.89■□□□□ 0.3
DDX39A-203ENST00000454233 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
DDX39A-203ENST00000454233 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
DDX39A-203ENST00000454233 KIDINS220Q9ULH0 1771 aa16.88■□□□□ 0.29
DDX39A-203ENST00000454233 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-203ENST00000454233 AGLP35573 1532 aa16.86■□□□□ 0.29
DDX39A-203ENST00000454233 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
DDX39A-203ENST00000454233 MAP3K1Q13233 1512 aa16.85■□□□□ 0.29
DDX39A-203ENST00000454233 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
DDX39A-203ENST00000454233 ATP7AQ04656 1500 aa16.84■□□□□ 0.29
DDX39A-203ENST00000454233 APLP2Q06481 763 aa16.83■□□□□ 0.28
DDX39A-203ENST00000454233 INO80Q9ULG1 1556 aaPredicted RBP16.81■□□□□ 0.28
DDX39A-203ENST00000454233 MBD5Q9P267 1494 aa16.81■□□□□ 0.28
DDX39A-203ENST00000454233 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
DDX39A-203ENST00000454233 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
DDX39A-203ENST00000454233 LMTK3Q96Q04 1460 aa16.8■□□□□ 0.28
DDX39A-203ENST00000454233 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
DDX39A-203ENST00000454233 A2MP01023 1474 aa16.79■□□□□ 0.28
DDX39A-203ENST00000454233 CEBPAP49715 358 aaPredicted RBP16.78■□□□□ 0.28
DDX39A-203ENST00000454233 RTEL1-TNFRSF6BF6WH68 1400 aa16.78■□□□□ 0.28
DDX39A-203ENST00000454233 CCDC141Q6ZP82 1450 aa16.77■□□□□ 0.28
DDX39A-203ENST00000454233 CNTLNQ9NXG0 1405 aa16.76■□□□□ 0.27
DDX39A-203ENST00000454233 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
DDX39A-203ENST00000454233 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
DDX39A-203ENST00000454233 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
DDX39A-203ENST00000454233 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
DDX39A-203ENST00000454233 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
DDX39A-203ENST00000454233 HSPA2P54652 639 aa16.73■□□□□ 0.27
DDX39A-203ENST00000454233 MIA2Q96PC5 1412 aa16.72■□□□□ 0.27
DDX39A-203ENST00000454233 GGT6Q6P531 493 aa16.72■□□□□ 0.27
DDX39A-203ENST00000454233 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
DDX39A-203ENST00000454233 DHX29Q7Z478 1369 aaKnown RBP16.71■□□□□ 0.27
DDX39A-203ENST00000454233 C3P01024 1663 aa16.71■□□□□ 0.27
DDX39A-203ENST00000454233 PREX1Q8TCU6 1659 aa16.71■□□□□ 0.27
DDX39A-203ENST00000454233 SETD1BQ9UPS6 1966 aaKnown RBP16.71■□□□□ 0.27
DDX39A-203ENST00000454233 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
DDX39A-203ENST00000454233 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
DDX39A-203ENST00000454233 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
DDX39A-203ENST00000454233 ZMYM3Q14202 1370 aa16.67■□□□□ 0.26
DDX39A-203ENST00000454233 KIF3BO15066 747 aa16.66■□□□□ 0.26
DDX39A-203ENST00000454233 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
DDX39A-203ENST00000454233 NPATQ14207 1427 aa16.64■□□□□ 0.25
DDX39A-203ENST00000454233 MAST1Q9Y2H9 1570 aa16.63■□□□□ 0.25
DDX39A-203ENST00000454233 PTPN23Q9H3S7 1636 aa16.61■□□□□ 0.25
DDX39A-203ENST00000454233 FGD6Q6ZV73 1430 aa16.6■□□□□ 0.25
DDX39A-203ENST00000454233 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
DDX39A-203ENST00000454233 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
DDX39A-203ENST00000454233 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
DDX39A-203ENST00000454233 WASHC2CQ9Y4E1 1318 aa16.58■□□□□ 0.24
DDX39A-203ENST00000454233 PTPRKQ15262 1439 aa16.58■□□□□ 0.24
DDX39A-203ENST00000454233 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
DDX39A-203ENST00000454233 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
DDX39A-203ENST00000454233 SHANK2Q9UPX8 1470 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms