RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
SEC16A-207ENST00000453963 MLECQ14165 292 aa15.39■□□□□ 0.05
SEC16A-207ENST00000453963 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
SEC16A-207ENST00000453963 RALBP1Q15311 655 aa15.39■□□□□ 0.05
SEC16A-207ENST00000453963 KTN1Q86UP2 1357 aaKnown RBP15.38■□□□□ 0.05
SEC16A-207ENST00000453963 MSNP26038 577 aaKnown RBP15.37■□□□□ 0.05
SEC16A-207ENST00000453963 GGT6Q6P531 493 aa15.37■□□□□ 0.05
SEC16A-207ENST00000453963 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
SEC16A-207ENST00000453963 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
SEC16A-207ENST00000453963 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
SEC16A-207ENST00000453963 CFAP44Q96MT7 982 aa15.37■□□□□ 0.05
SEC16A-207ENST00000453963 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
SEC16A-207ENST00000453963 FMN1Q68DA7 1419 aa15.36■□□□□ 0.05
SEC16A-207ENST00000453963 PTMSP20962 102 aa15.34■□□□□ 0.05
SEC16A-207ENST00000453963 PKD2Q13563 968 aa15.34■□□□□ 0.05
SEC16A-207ENST00000453963 USP35Q9P2H5 1018 aa15.33■□□□□ 0.05
SEC16A-207ENST00000453963 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
SEC16A-207ENST00000453963 PDE3BQ13370 1112 aa15.32■□□□□ 0.04
SEC16A-207ENST00000453963 GBP4Q96PP9 640 aa15.31■□□□□ 0.04
SEC16A-207ENST00000453963 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
SEC16A-207ENST00000453963 MPHOSPH9Q99550 1183 aa15.31■□□□□ 0.04
SEC16A-207ENST00000453963 CHAF1AQ13111 956 aaPredicted RBP15.31■□□□□ 0.04
SEC16A-207ENST00000453963 DHX57Q6P158 1386 aaKnown RBP15.3■□□□□ 0.04
SEC16A-207ENST00000453963 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
SEC16A-207ENST00000453963 FANCIQ9NVI1 1328 aa15.29■□□□□ 0.04
SEC16A-207ENST00000453963 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
SEC16A-207ENST00000453963 SRPK2P78362 688 aaKnown RBP15.29■□□□□ 0.04
SEC16A-207ENST00000453963 TPRNQ4KMQ1 711 aa15.29■□□□□ 0.04
SEC16A-207ENST00000453963 NRDCO43847 1150 aa15.28■□□□□ 0.04
SEC16A-207ENST00000453963 RWDD1Q9H446 243 aaPredicted RBP15.28■□□□□ 0.04
SEC16A-207ENST00000453963 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
SEC16A-207ENST00000453963 SLKQ9H2G2 1235 aaPredicted RBP15.27■□□□□ 0.03
SEC16A-207ENST00000453963 SAFB2Q14151 953 aaKnown RBP eCLIP15.26■□□□□ 0.03
SEC16A-207ENST00000453963 FOXD1Q16676 465 aa15.26■□□□□ 0.03
SEC16A-207ENST00000453963 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
SEC16A-207ENST00000453963 NUP155O75694 1391 aa15.26■□□□□ 0.03
SEC16A-207ENST00000453963 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SEC16A-207ENST00000453963 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
SEC16A-207ENST00000453963 MCCP23508 829 aa15.26■□□□□ 0.03
SEC16A-207ENST00000453963 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
SEC16A-207ENST00000453963 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
SEC16A-207ENST00000453963 OS9Q13438 667 aaPredicted RBP15.25■□□□□ 0.03
SEC16A-207ENST00000453963 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
SEC16A-207ENST00000453963 GOLGA6L3A6NEY3 463 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 PMFBP1Q8TBY8 1022 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 FGD1P98174 961 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 WIZO95785 1651 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
SEC16A-207ENST00000453963 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
SEC16A-207ENST00000453963 KCNJ4P48050 445 aa15.22■□□□□ 0.03
SEC16A-207ENST00000453963 STK26Q9P289 416 aa15.22■□□□□ 0.03
SEC16A-207ENST00000453963 GZF1Q9H116 711 aaPredicted RBP15.22■□□□□ 0.03
SEC16A-207ENST00000453963 SOX12O15370 315 aa15.21■□□□□ 0.03
SEC16A-207ENST00000453963 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
SEC16A-207ENST00000453963 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.03
SEC16A-207ENST00000453963 KIF3BO15066 747 aa15.2■□□□□ 0.02
SEC16A-207ENST00000453963 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
SEC16A-207ENST00000453963 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
SEC16A-207ENST00000453963 RSPH4AQ5TD94 716 aa15.2■□□□□ 0.02
SEC16A-207ENST00000453963 PHLDB1Q86UU1 1377 aa15.19■□□□□ 0.02
SEC16A-207ENST00000453963 PDE4AP27815 886 aa15.18■□□□□ 0.02
SEC16A-207ENST00000453963 KIAA2012Q0VF49 1180 aa15.18■□□□□ 0.02
SEC16A-207ENST00000453963 HNRNPMP52272 730 aaKnown RBP eCLIP15.18■□□□□ 0.021e-6■■■□□ 15.9
SEC16A-207ENST00000453963 PRKRIP1Q9H875 184 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-207ENST00000453963 HDGFL2Q7Z4V5 671 aaPredicted RBP15.17■□□□□ 0.02
SEC16A-207ENST00000453963 SPAG9O60271 1321 aaKnown RBP15.17■□□□□ 0.02
SEC16A-207ENST00000453963 NPHP1O15259 732 aa15.16■□□□□ 0.02
SEC16A-207ENST00000453963 RSPH6AQ9H0K4 717 aa15.16■□□□□ 0.02
SEC16A-207ENST00000453963 GSE1Q14687 1217 aa15.15■□□□□ 0.02
SEC16A-207ENST00000453963 KIF15Q9NS87 1388 aa15.15■□□□□ 0.02
SEC16A-207ENST00000453963 SYAP1Q96A49 352 aaPredicted RBP15.15■□□□□ 0.02
SEC16A-207ENST00000453963 CENPQQ7L2Z9 268 aaPredicted RBP15.15■□□□□ 0.02
SEC16A-207ENST00000453963 CALD1Q05682 793 aaKnown RBP15.14■□□□□ 0.01
SEC16A-207ENST00000453963 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
SEC16A-207ENST00000453963 MYBBP1AQ9BQG0 1328 aaKnown RBP15.14■□□□□ 0.01
SEC16A-207ENST00000453963 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
SEC16A-207ENST00000453963 MFAP1P55081 439 aaKnown RBP15.13■□□□□ 0.01
SEC16A-207ENST00000453963 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
SEC16A-207ENST00000453963 DRC7Q8IY82 874 aa15.13■□□□□ 0.01
SEC16A-207ENST00000453963 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
SEC16A-207ENST00000453963 U2AF1L5P0DN76 240 aaPredicted RBP15.12■□□□□ 0.01
SEC16A-207ENST00000453963 U2AF1Q01081 240 aaKnown RBP eCLIP15.12■□□□□ 0.01
SEC16A-207ENST00000453963 CENPJQ9HC77 1338 aaPredicted RBP15.11■□□□□ 0.01
SEC16A-207ENST00000453963 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
SEC16A-207ENST00000453963 RRP1P56182 461 aaKnown RBP15.11■□□□□ 0.01
SEC16A-207ENST00000453963 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
SEC16A-207ENST00000453963 SMARCA4P51532 1647 aa15.1■□□□□ 0.01
SEC16A-207ENST00000453963 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
SEC16A-207ENST00000453963 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
SEC16A-207ENST00000453963 DDX11L8A8MPP1 907 aa15.09■□□□□ 0.01
SEC16A-207ENST00000453963 RTF1Q92541 710 aaKnown RBP15.09■□□□□ 0.01
SEC16A-207ENST00000453963 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
SEC16A-207ENST00000453963 EXOC6Q8TAG9 804 aa15.08■□□□□ 0
SEC16A-207ENST00000453963 EIF3AQ14152 1382 aaKnown RBP15.08■□□□□ 0
SEC16A-207ENST00000453963 SMC4Q9NTJ3 1288 aa15.08■□□□□ 0
SEC16A-207ENST00000453963 PAK3O75914 559 aaPredicted RBP15.06■□□□□ 0
SEC16A-207ENST00000453963 HSP90AA2PQ14568 343 aaPredicted RBP15.06■□□□□ 0
SEC16A-207ENST00000453963 PTPRGP23470 1445 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms