RNA–Protein interactions for RNA: ENST00000453177.2

CLIC4P1-201, Transcript of chloride intracellular channel 4 pseudogene 1, humanhuman

BASIC

Gene CLIC4P1, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P1-201ENST00000453177 LHX8Q68G74 356 aa13.09□□□□□ -0.31
CLIC4P1-201ENST00000453177 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
CLIC4P1-201ENST00000453177 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
CLIC4P1-201ENST00000453177 PDE4AP27815 886 aa13.08□□□□□ -0.32
CLIC4P1-201ENST00000453177 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
CLIC4P1-201ENST00000453177 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
CLIC4P1-201ENST00000453177 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
CLIC4P1-201ENST00000453177 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
CLIC4P1-201ENST00000453177 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
CLIC4P1-201ENST00000453177 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
CLIC4P1-201ENST00000453177 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
CLIC4P1-201ENST00000453177 KIF3CO14782 793 aa13.02□□□□□ -0.33
CLIC4P1-201ENST00000453177 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
CLIC4P1-201ENST00000453177 MFSD10Q14728 455 aa13□□□□□ -0.33
CLIC4P1-201ENST00000453177 SLAIN1Q8ND83 568 aa13□□□□□ -0.33
CLIC4P1-201ENST00000453177 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
CLIC4P1-201ENST00000453177 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
CLIC4P1-201ENST00000453177 DSG2Q14126 1118 aa12.97□□□□□ -0.33
CLIC4P1-201ENST00000453177 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
CLIC4P1-201ENST00000453177 FOXK1P85037 733 aa12.96□□□□□ -0.33
CLIC4P1-201ENST00000453177 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
CLIC4P1-201ENST00000453177 E2F4Q16254 413 aa12.88□□□□□ -0.35
CLIC4P1-201ENST00000453177 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
CLIC4P1-201ENST00000453177 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
CLIC4P1-201ENST00000453177 KCNV2Q8TDN2 545 aa12.82□□□□□ -0.36
CLIC4P1-201ENST00000453177 SNPHO15079 494 aa12.79□□□□□ -0.36
CLIC4P1-201ENST00000453177 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
CLIC4P1-201ENST00000453177 SLC34A2O95436 690 aa12.78□□□□□ -0.36
CLIC4P1-201ENST00000453177 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
CLIC4P1-201ENST00000453177 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
CLIC4P1-201ENST00000453177 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLIC4P1-201ENST00000453177 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
CLIC4P1-201ENST00000453177 RIMBP2O15034 1052 aa12.74□□□□□ -0.37
CLIC4P1-201ENST00000453177 ARHGEF1Q92888 912 aaKnown RBP12.74□□□□□ -0.37
CLIC4P1-201ENST00000453177 DPYSL4O14531 572 aa12.73□□□□□ -0.37
CLIC4P1-201ENST00000453177 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
CLIC4P1-201ENST00000453177 PTCD2Q8WV60 388 aaKnown RBP12.73□□□□□ -0.37
CLIC4P1-201ENST00000453177 ARIH1Q9Y4X5 557 aaPredicted RBP12.73□□□□□ -0.37
CLIC4P1-201ENST00000453177 TBC1D12O60347 775 aa12.71□□□□□ -0.37
CLIC4P1-201ENST00000453177 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
CLIC4P1-201ENST00000453177 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
CLIC4P1-201ENST00000453177 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
CLIC4P1-201ENST00000453177 ARSIQ5FYB1 569 aa12.66□□□□□ -0.38
CLIC4P1-201ENST00000453177 GPR153Q6NV75 609 aa12.64□□□□□ -0.39
CLIC4P1-201ENST00000453177 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
CLIC4P1-201ENST00000453177 NBR1Q14596 966 aa12.63□□□□□ -0.39
CLIC4P1-201ENST00000453177 PDIA6Q15084 440 aa12.63□□□□□ -0.39
CLIC4P1-201ENST00000453177 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLIC4P1-201ENST00000453177 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
CLIC4P1-201ENST00000453177 EVI5O60447 810 aa12.62□□□□□ -0.39
CLIC4P1-201ENST00000453177 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
CLIC4P1-201ENST00000453177 NUDT7P0C024 238 aa12.6□□□□□ -0.39
CLIC4P1-201ENST00000453177 HOXB1P14653 301 aaPredicted RBP12.6□□□□□ -0.39
CLIC4P1-201ENST00000453177 ST18O60284 1047 aa12.59□□□□□ -0.39
CLIC4P1-201ENST00000453177 BCANQ96GW7 911 aa12.58□□□□□ -0.4
CLIC4P1-201ENST00000453177 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
CLIC4P1-201ENST00000453177 SEMA3EO15041 775 aa12.56□□□□□ -0.4
CLIC4P1-201ENST00000453177 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
CLIC4P1-201ENST00000453177 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
CLIC4P1-201ENST00000453177 PTGER2P43116 358 aa12.5□□□□□ -0.41
CLIC4P1-201ENST00000453177 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
CLIC4P1-201ENST00000453177 DDX12PQ92771 950 aa12.5□□□□□ -0.41
CLIC4P1-201ENST00000453177 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
CLIC4P1-201ENST00000453177 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
CLIC4P1-201ENST00000453177 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
CLIC4P1-201ENST00000453177 EMP3P54852 163 aa12.49□□□□□ -0.41
CLIC4P1-201ENST00000453177 GRXCR2A6NFK2 248 aa12.48□□□□□ -0.41
CLIC4P1-201ENST00000453177 JPH4Q96JJ6 628 aa12.45□□□□□ -0.42
CLIC4P1-201ENST00000453177 ERBB3P21860 1342 aa12.44□□□□□ -0.42
CLIC4P1-201ENST00000453177 PSDA5PKW4 1024 aaPredicted RBP12.44□□□□□ -0.42
CLIC4P1-201ENST00000453177 PHF14O94880 888 aa12.44□□□□□ -0.42
CLIC4P1-201ENST00000453177 FOSBP53539 338 aa12.44□□□□□ -0.42
CLIC4P1-201ENST00000453177 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
CLIC4P1-201ENST00000453177 ZNF454Q8N9F8 522 aa12.44□□□□□ -0.42
CLIC4P1-201ENST00000453177 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
CLIC4P1-201ENST00000453177 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
CLIC4P1-201ENST00000453177 FAM205CA6NFA0 338 aa12.41□□□□□ -0.42
CLIC4P1-201ENST00000453177 EPAS1Q99814 870 aa12.41□□□□□ -0.42
CLIC4P1-201ENST00000453177 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
CLIC4P1-201ENST00000453177 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
CLIC4P1-201ENST00000453177 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
CLIC4P1-201ENST00000453177 OSBPP22059 807 aa12.39□□□□□ -0.43
CLIC4P1-201ENST00000453177 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
CLIC4P1-201ENST00000453177 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
CLIC4P1-201ENST00000453177 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
CLIC4P1-201ENST00000453177 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
CLIC4P1-201ENST00000453177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLIC4P1-201ENST00000453177 RBM33Q96EV2 1170 aaKnown RBP12.35□□□□□ -0.43
CLIC4P1-201ENST00000453177 EN1Q05925 392 aaPredicted RBP12.34□□□□□ -0.43
CLIC4P1-201ENST00000453177 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
CLIC4P1-201ENST00000453177 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
CLIC4P1-201ENST00000453177 MAP3K7O43318 606 aa12.33□□□□□ -0.44
CLIC4P1-201ENST00000453177 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
CLIC4P1-201ENST00000453177 LMOD2Q6P5Q4 547 aa12.33□□□□□ -0.44
CLIC4P1-201ENST00000453177 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
CLIC4P1-201ENST00000453177 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
CLIC4P1-201ENST00000453177 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
CLIC4P1-201ENST00000453177 NUTM2FA1L443 756 aa12.28□□□□□ -0.44
CLIC4P1-201ENST00000453177 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
CLIC4P1-201ENST00000453177 POTEMA6NI47 508 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms