RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PLCH2O75038 1416 aa15.62■□□□□ 0.09
USP54-207ENST00000451492 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
USP54-207ENST00000451492 ZFYVE16Q7Z3T8 1539 aa15.59■□□□□ 0.09
USP54-207ENST00000451492 BCORL1Q5H9F3 1711 aa15.59■□□□□ 0.09
USP54-207ENST00000451492 SIGLEC1Q9BZZ2 1709 aa15.59■□□□□ 0.09
USP54-207ENST00000451492 SCAPERQ9BY12 1400 aa15.59■□□□□ 0.09
USP54-207ENST00000451492 ITSN2Q9NZM3 1697 aa15.58■□□□□ 0.08
USP54-207ENST00000451492 POGZQ7Z3K3 1410 aa15.58■□□□□ 0.08
USP54-207ENST00000451492 LOC105371045A0A1W2PR82 267 aa15.57■□□□□ 0.08
USP54-207ENST00000451492 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
USP54-207ENST00000451492 ARID4BQ4LE39 1312 aaPredicted RBP15.56■□□□□ 0.08
USP54-207ENST00000451492 ADAMTSL3P82987 1691 aa15.55■□□□□ 0.08
USP54-207ENST00000451492 RIMS1Q86UR5 1692 aaKnown RBP15.55■□□□□ 0.08
USP54-207ENST00000451492 YEATS2Q9ULM3 1422 aa15.55■□□□□ 0.08
USP54-207ENST00000451492 EFCAB2Q5VUJ9 269 aa15.54■□□□□ 0.08
USP54-207ENST00000451492 ABCC1P33527 1531 aa15.53■□□□□ 0.08
USP54-207ENST00000451492 HECW2Q9P2P5 1572 aa15.53■□□□□ 0.08
USP54-207ENST00000451492 EHBP1L1Q8N3D4 1523 aa15.52■□□□□ 0.07
USP54-207ENST00000451492 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
USP54-207ENST00000451492 SAMD9LQ8IVG5 1584 aa15.51■□□□□ 0.07
USP54-207ENST00000451492 FER1L4A9Z1Z3 1794 aa15.51■□□□□ 0.07
USP54-207ENST00000451492 ZNF518AQ6AHZ1 1483 aa15.51■□□□□ 0.07
USP54-207ENST00000451492 KDM5CP41229 1560 aa15.5■□□□□ 0.07
USP54-207ENST00000451492 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
USP54-207ENST00000451492 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
USP54-207ENST00000451492 MAGI2Q86UL8 1455 aa15.49■□□□□ 0.07
USP54-207ENST00000451492 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
USP54-207ENST00000451492 TIAM1Q13009 1591 aa15.49■□□□□ 0.07
USP54-207ENST00000451492 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
USP54-207ENST00000451492 DIP2CQ9Y2E4 1556 aa15.48■□□□□ 0.07
USP54-207ENST00000451492 ARHGEF12Q9NZN5 1544 aa15.48■□□□□ 0.07
USP54-207ENST00000451492 SUPT6HQ7KZ85 1726 aaKnown RBP15.47■□□□□ 0.07
USP54-207ENST00000451492 AFAP1Q8N556 730 aa15.46■□□□□ 0.07
USP54-207ENST00000451492 GPATCH8Q9UKJ3 1502 aaKnown RBP15.46■□□□□ 0.07
USP54-207ENST00000451492 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
USP54-207ENST00000451492 PTPRMP28827 1452 aa15.46■□□□□ 0.06
USP54-207ENST00000451492 C9orf84Q5VXU9 1444 aa15.45■□□□□ 0.06
USP54-207ENST00000451492 TRAPPC8Q9Y2L5 1435 aa15.45■□□□□ 0.06
USP54-207ENST00000451492 MLECQ14165 292 aa15.45■□□□□ 0.06
USP54-207ENST00000451492 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
USP54-207ENST00000451492 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
USP54-207ENST00000451492 VPS8Q8N3P4 1428 aa15.44■□□□□ 0.06
USP54-207ENST00000451492 ATP10AO60312 1499 aa15.43■□□□□ 0.06
USP54-207ENST00000451492 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
USP54-207ENST00000451492 NCOA2Q15596 1464 aa15.39■□□□□ 0.05
USP54-207ENST00000451492 MLH3Q9UHC1 1453 aa15.39■□□□□ 0.05
USP54-207ENST00000451492 INO80Q9ULG1 1556 aaPredicted RBP15.38■□□□□ 0.05
USP54-207ENST00000451492 HNRNPMP52272 730 aaKnown RBP eCLIP15.38■□□□□ 0.053e-6■■■■□ 21.2
USP54-207ENST00000451492 ATP7AQ04656 1500 aa15.38■□□□□ 0.05
USP54-207ENST00000451492 REREQ9P2R6 1566 aa15.36■□□□□ 0.05
USP54-207ENST00000451492 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
USP54-207ENST00000451492 PLEKHH2Q8IVE3 1493 aa15.35■□□□□ 0.05
USP54-207ENST00000451492 CAMSAP2Q08AD1 1489 aa15.34■□□□□ 0.05
USP54-207ENST00000451492 ZNF644Q9H582 1327 aaPredicted RBP15.34■□□□□ 0.05
USP54-207ENST00000451492 ADGBQ8N7X0 1667 aa15.33■□□□□ 0.04
USP54-207ENST00000451492 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
USP54-207ENST00000451492 C3P01024 1663 aa15.32■□□□□ 0.04
USP54-207ENST00000451492 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
USP54-207ENST00000451492 PREX1Q8TCU6 1659 aa15.3■□□□□ 0.04
USP54-207ENST00000451492 AGLP35573 1532 aa15.29■□□□□ 0.04
USP54-207ENST00000451492 LMTK3Q96Q04 1460 aa15.29■□□□□ 0.04
USP54-207ENST00000451492 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
USP54-207ENST00000451492 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
USP54-207ENST00000451492 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
USP54-207ENST00000451492 MAP3K1Q13233 1512 aa15.27■□□□□ 0.04
USP54-207ENST00000451492 MBD5Q9P267 1494 aa15.27■□□□□ 0.04
USP54-207ENST00000451492 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.03
USP54-207ENST00000451492 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
USP54-207ENST00000451492 A2MP01023 1474 aa15.26■□□□□ 0.03
USP54-207ENST00000451492 APLP2Q06481 763 aa15.25■□□□□ 0.03
USP54-207ENST00000451492 ESF1Q9H501 851 aaKnown RBP15.24■□□□□ 0.03
USP54-207ENST00000451492 MROH2AA6NES4 1674 aa15.24■□□□□ 0.03
USP54-207ENST00000451492 ARHGEF5Q12774 1597 aa15.24■□□□□ 0.03
USP54-207ENST00000451492 HSPA2P54652 639 aa15.22■□□□□ 0.03
USP54-207ENST00000451492 MYOM3Q5VTT5 1437 aa15.22■□□□□ 0.03
USP54-207ENST00000451492 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
USP54-207ENST00000451492 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
USP54-207ENST00000451492 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
USP54-207ENST00000451492 GGT6Q6P531 493 aa15.18■□□□□ 0.02
USP54-207ENST00000451492 UHRF1BP1Q6BDS2 1440 aa15.17■□□□□ 0.02
USP54-207ENST00000451492 CNTLNQ9NXG0 1405 aa15.17■□□□□ 0.02
USP54-207ENST00000451492 MAST1Q9Y2H9 1570 aa15.16■□□□□ 0.02
USP54-207ENST00000451492 MIA2Q96PC5 1412 aa15.16■□□□□ 0.02
USP54-207ENST00000451492 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
USP54-207ENST00000451492 MYO3AQ8NEV4 1616 aa15.15■□□□□ 0.02
USP54-207ENST00000451492 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
USP54-207ENST00000451492 TSPY4P0CV99 314 aa15.13■□□□□ 0.01
USP54-207ENST00000451492 TSPY10P0CW01 314 aa15.13■□□□□ 0.01
USP54-207ENST00000451492 STRCQ7RTU9 1775 aa15.13■□□□□ 0.01
USP54-207ENST00000451492 DNMT1P26358 1616 aaKnown RBP15.13■□□□□ 0.01
USP54-207ENST00000451492 CEP152O94986 1710 aa15.12■□□□□ 0.01
USP54-207ENST00000451492 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
USP54-207ENST00000451492 KIF3BO15066 747 aa15.11■□□□□ 0.01
USP54-207ENST00000451492 RSPH4AQ5TD94 716 aa15.11■□□□□ 0.01
USP54-207ENST00000451492 KDM5DQ9BY66 1539 aa15.11■□□□□ 0.01
USP54-207ENST00000451492 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
USP54-207ENST00000451492 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
USP54-207ENST00000451492 ZNF142P52746 1687 aaPredicted RBP15.1■□□□□ 0.01
USP54-207ENST00000451492 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
USP54-207ENST00000451492 DAPK1P53355 1430 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 665.1 ms