RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 ARID4BQ4LE39 1312 aaPredicted RBP42.82■■■■■ 4.45
PBRM1-217ENST00000450271 EFCAB2Q5VUJ9 269 aa42.81■■■■■ 4.44
PBRM1-217ENST00000450271 MAGI2Q86UL8 1455 aa42.8■■■■■ 4.44
PBRM1-217ENST00000450271 PTPRMP28827 1452 aa42.79■■■■■ 4.44
PBRM1-217ENST00000450271 CCDC18Q5T9S5 1454 aa42.79■■■■■ 4.44
PBRM1-217ENST00000450271 ZFYVE16Q7Z3T8 1539 aa42.78■■■■■ 4.44
PBRM1-217ENST00000450271 YEATS2Q9ULM3 1422 aa42.78■■■■■ 4.44
PBRM1-217ENST00000450271 FYCO1Q9BQS8 1478 aa42.72■■■■■ 4.43
PBRM1-217ENST00000450271 MADDQ8WXG6 1647 aa42.71■■■■■ 4.43
PBRM1-217ENST00000450271 ARHGAP5Q13017 1502 aa42.69■■■■■ 4.42
PBRM1-217ENST00000450271 SIGLEC1Q9BZZ2 1709 aa42.65■■■■■ 4.42
PBRM1-217ENST00000450271 ZNF518AQ6AHZ1 1483 aa42.6■■■■■ 4.41
PBRM1-217ENST00000450271 CDC42BPBQ9Y5S2 1711 aa42.59■■■■■ 4.41
PBRM1-217ENST00000450271 PREX2Q70Z35 1606 aa42.56■■■■■ 4.4
PBRM1-217ENST00000450271 ATP10AO60312 1499 aa42.55■■■■■ 4.4
PBRM1-217ENST00000450271 KDM5CP41229 1560 aa42.55■■■■■ 4.4
PBRM1-217ENST00000450271 AFAP1Q8N556 730 aa42.54■■■■■ 4.4
PBRM1-217ENST00000450271 RIMS1Q86UR5 1692 aaKnown RBP42.54■■■■■ 4.4
PBRM1-217ENST00000450271 C9orf84Q5VXU9 1444 aa42.51■■■■■ 4.4
PBRM1-217ENST00000450271 ABCC1P33527 1531 aa42.46■■■■■ 4.39
PBRM1-217ENST00000450271 ARHGEF12Q9NZN5 1544 aa42.44■■■■■ 4.38
PBRM1-217ENST00000450271 CDC42BPAQ5VT25 1732 aa42.43■■■■■ 4.38
PBRM1-217ENST00000450271 MLECQ14165 292 aa42.43■■■■■ 4.38
PBRM1-217ENST00000450271 TRAPPC8Q9Y2L5 1435 aa42.4■■■■■ 4.38
PBRM1-217ENST00000450271 MLH3Q9UHC1 1453 aa42.39■■■■■ 4.38
PBRM1-217ENST00000450271 LMTK3Q96Q04 1460 aa42.36■■■■■ 4.37
PBRM1-217ENST00000450271 DIP2CQ9Y2E4 1556 aa42.36■■■■■ 4.37
PBRM1-217ENST00000450271 GPATCH8Q9UKJ3 1502 aaKnown RBP42.36■■■■■ 4.37
PBRM1-217ENST00000450271 ITSN2Q9NZM3 1697 aa42.35■■■■■ 4.37
PBRM1-217ENST00000450271 CEP162Q5TB80 1403 aa42.35■■■■■ 4.37
PBRM1-217ENST00000450271 FER1L4A9Z1Z3 1794 aa42.34■■■■■ 4.37
PBRM1-217ENST00000450271 MYT1LQ9UL68 1186 aa42.31■■■■■ 4.36
PBRM1-217ENST00000450271 REREQ9P2R6 1566 aa42.31■■■■■ 4.36
PBRM1-217ENST00000450271 ABCA6Q8N139 1617 aa42.29■■■■■ 4.36
PBRM1-217ENST00000450271 PLPPR3Q6T4P5 718 aa42.27■■■■■ 4.36
PBRM1-217ENST00000450271 SAMD9LQ8IVG5 1584 aa42.27■■■■■ 4.36
PBRM1-217ENST00000450271 MTUS2Q5JR59 1369 aa42.26■■■■■ 4.35
PBRM1-217ENST00000450271 ILDR1Q86SU0 546 aaPredicted RBP42.25■■■■■ 4.35
PBRM1-217ENST00000450271 ZNF777Q9ULD5 760 aaPredicted RBP42.24■■■■■ 4.35
PBRM1-217ENST00000450271 KIDINS220Q9ULH0 1771 aa42.2■■■■■ 4.35
PBRM1-217ENST00000450271 CCNB3Q8WWL7 1395 aa42.2■■■■■ 4.35
PBRM1-217ENST00000450271 SYCP2Q9BX26 1530 aa42.2■■■■■ 4.35
PBRM1-217ENST00000450271 AGLP35573 1532 aa42.18■■■■■ 4.34
PBRM1-217ENST00000450271 CFDP1Q9UEE9 299 aaPredicted RBP42.17■■■■■ 4.34
PBRM1-217ENST00000450271 KIAA1107Q9UPP5 1409 aa42.15■■■■■ 4.34
PBRM1-217ENST00000450271 EHBP1L1Q8N3D4 1523 aa42.14■■■■■ 4.34
PBRM1-217ENST00000450271 HNRNPMP52272 730 aaKnown RBP eCLIP42.13■■■■■ 4.33
PBRM1-217ENST00000450271 PLEKHH2Q8IVE3 1493 aa42.11■■■■■ 4.33
PBRM1-217ENST00000450271 HSPA2P54652 639 aa42.1■■■■■ 4.33
PBRM1-217ENST00000450271 CEBPAP49715 358 aaPredicted RBP42.08■■■■■ 4.33
PBRM1-217ENST00000450271 TIAM1Q13009 1591 aa42.07■■■■■ 4.33
PBRM1-217ENST00000450271 SPAG9O60271 1321 aaKnown RBP42.07■■■■■ 4.33
PBRM1-217ENST00000450271 LOC105371045A0A1W2PR82 267 aa42.03■■■■■ 4.32
PBRM1-217ENST00000450271 ATP7AQ04656 1500 aa41.99■■■■■ 4.31
PBRM1-217ENST00000450271 INO80Q9ULG1 1556 aaPredicted RBP41.97■■■■■ 4.31
PBRM1-217ENST00000450271 ZNF644Q9H582 1327 aaPredicted RBP41.96■■■■■ 4.31
PBRM1-217ENST00000450271 PREX1Q8TCU6 1659 aa41.96■■■■■ 4.31
PBRM1-217ENST00000450271 MBD5Q9P267 1494 aa41.92■■■■■ 4.3
PBRM1-217ENST00000450271 VPS8Q8N3P4 1428 aa41.9■■■■■ 4.3
PBRM1-217ENST00000450271 ESF1Q9H501 851 aaKnown RBP41.9■■■■■ 4.3
PBRM1-217ENST00000450271 C3P01024 1663 aa41.9■■■■■ 4.3
PBRM1-217ENST00000450271 NCOA2Q15596 1464 aa41.89■■■■■ 4.3
PBRM1-217ENST00000450271 PLXNC1O60486 1568 aa41.88■■■■■ 4.3
PBRM1-217ENST00000450271 CNTLNQ9NXG0 1405 aa41.88■■■■■ 4.3
PBRM1-217ENST00000450271 SETD1BQ9UPS6 1966 aaKnown RBP41.88■■■■■ 4.29
PBRM1-217ENST00000450271 A2MP01023 1474 aa41.86■■■■■ 4.29
PBRM1-217ENST00000450271 SUPT6HQ7KZ85 1726 aaKnown RBP41.86■■■■■ 4.29
PBRM1-217ENST00000450271 UHRF1BP1Q6BDS2 1440 aa41.84■■■■■ 4.29
PBRM1-217ENST00000450271 RTEL1-TNFRSF6BF6WH68 1400 aa41.77■■■■■ 4.28
PBRM1-217ENST00000450271 FBXO41Q8TF61 875 aa41.76■■■■■ 4.28
PBRM1-217ENST00000450271 LRRC9Q6ZRR7 1453 aa41.75■■■■■ 4.27
PBRM1-217ENST00000450271 CAMSAP2Q08AD1 1489 aa41.74■■■■■ 4.27
PBRM1-217ENST00000450271 MROH2AA6NES4 1674 aa41.73■■■■■ 4.27
PBRM1-217ENST00000450271 ADGBQ8N7X0 1667 aa41.73■■■■■ 4.27
PBRM1-217ENST00000450271 ZMYM3Q14202 1370 aa41.7■■■■■ 4.27
PBRM1-217ENST00000450271 CCDC141Q6ZP82 1450 aa41.7■■■■■ 4.27
PBRM1-217ENST00000450271 MAP3K1Q13233 1512 aa41.68■■■■■ 4.26
PBRM1-217ENST00000450271 NPATQ14207 1427 aa41.67■■■■■ 4.26
PBRM1-217ENST00000450271 STRCQ7RTU9 1775 aa41.65■■■■■ 4.26
PBRM1-217ENST00000450271 RSPH4AQ5TD94 716 aa41.65■■■■■ 4.26
PBRM1-217ENST00000450271 GGT6Q6P531 493 aa41.64■■■■■ 4.26
PBRM1-217ENST00000450271 DHX29Q7Z478 1369 aaKnown RBP41.63■■■■■ 4.26
PBRM1-217ENST00000450271 KANK4Q5T7N3 995 aaPredicted RBP41.62■■■■■ 4.25
PBRM1-217ENST00000450271 CLTCQ00610 1675 aaKnown RBP41.61■■■■■ 4.25
PBRM1-217ENST00000450271 PPP6R1Q9UPN7 881 aa41.61■■■■■ 4.25
PBRM1-217ENST00000450271 ARHGEF5Q12774 1597 aa41.58■■■■■ 4.25
PBRM1-217ENST00000450271 DMRT2Q9Y5R5 561 aa41.57■■■■■ 4.25
PBRM1-217ENST00000450271 PTPRKQ15262 1439 aa41.52■■■■■ 4.24
PBRM1-217ENST00000450271 CERKQ8TCT0 537 aa41.49■■■■■ 4.23
PBRM1-217ENST00000450271 NCOA1Q15788 1441 aa41.47■■■■■ 4.23
PBRM1-217ENST00000450271 PTPRTO14522 1441 aa41.46■■■■■ 4.23
PBRM1-217ENST00000450271 MYOM3Q5VTT5 1437 aa41.46■■■■■ 4.23
PBRM1-217ENST00000450271 TSPY4P0CV99 314 aa41.46■■■■■ 4.23
PBRM1-217ENST00000450271 TSPY10P0CW01 314 aa41.46■■■■■ 4.23
PBRM1-217ENST00000450271 KIF3BO15066 747 aa41.45■■■■■ 4.23
PBRM1-217ENST00000450271 MIA2Q96PC5 1412 aa41.44■■■■■ 4.23
PBRM1-217ENST00000450271 MYO3AQ8NEV4 1616 aa41.4■■■■■ 4.22
PBRM1-217ENST00000450271 MAST1Q9Y2H9 1570 aa41.38■■■■■ 4.22
PBRM1-217ENST00000450271 CAMSAP1Q5T5Y3 1602 aa41.38■■■■■ 4.21
PBRM1-217ENST00000450271 FAM135AQ9P2D6 1515 aa41.38■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms