RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 ARHGEF40Q8TER5 1519 aa25.39■■□□□ 1.66
HDLBP-223ENST00000449864 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
HDLBP-223ENST00000449864 SCAPERQ9BY12 1400 aa25.32■■□□□ 1.64
HDLBP-223ENST00000449864 EFCAB2Q5VUJ9 269 aa25.32■■□□□ 1.64
HDLBP-223ENST00000449864 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
HDLBP-223ENST00000449864 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
HDLBP-223ENST00000449864 ZFYVE16Q7Z3T8 1539 aa25.31■■□□□ 1.64
HDLBP-223ENST00000449864 ITSN2Q9NZM3 1697 aa25.29■■□□□ 1.64
HDLBP-223ENST00000449864 EHBP1L1Q8N3D4 1523 aa25.27■■□□□ 1.64
HDLBP-223ENST00000449864 BCORL1Q5H9F3 1711 aa25.26■■□□□ 1.63
HDLBP-223ENST00000449864 MTUS2Q5JR59 1369 aa25.26■■□□□ 1.63
HDLBP-223ENST00000449864 MAGI2Q86UL8 1455 aa25.25■■□□□ 1.63
HDLBP-223ENST00000449864 ABCC1P33527 1531 aa25.25■■□□□ 1.63
HDLBP-223ENST00000449864 ZNF518AQ6AHZ1 1483 aa25.24■■□□□ 1.63
HDLBP-223ENST00000449864 ADAMTSL3P82987 1691 aa25.23■■□□□ 1.63
HDLBP-223ENST00000449864 KDM5CP41229 1560 aa25.22■■□□□ 1.63
HDLBP-223ENST00000449864 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
HDLBP-223ENST00000449864 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
HDLBP-223ENST00000449864 YEATS2Q9ULM3 1422 aa25.2■■□□□ 1.63
HDLBP-223ENST00000449864 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
HDLBP-223ENST00000449864 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
HDLBP-223ENST00000449864 SAMD9LQ8IVG5 1584 aa25.19■■□□□ 1.62
HDLBP-223ENST00000449864 ARID4BQ4LE39 1312 aaPredicted RBP25.19■■□□□ 1.62
HDLBP-223ENST00000449864 SUPT6HQ7KZ85 1726 aaKnown RBP25.18■■□□□ 1.62
HDLBP-223ENST00000449864 MADDQ8WXG6 1647 aa25.18■■□□□ 1.62
HDLBP-223ENST00000449864 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
HDLBP-223ENST00000449864 CCNB3Q8WWL7 1395 aa25.16■■□□□ 1.62
HDLBP-223ENST00000449864 RIMS1Q86UR5 1692 aaKnown RBP25.14■■□□□ 1.62
HDLBP-223ENST00000449864 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
HDLBP-223ENST00000449864 ABCA6Q8N139 1617 aa25.12■■□□□ 1.61
HDLBP-223ENST00000449864 FER1L4A9Z1Z3 1794 aa25.12■■□□□ 1.61
HDLBP-223ENST00000449864 ARHGEF12Q9NZN5 1544 aa25.12■■□□□ 1.61
HDLBP-223ENST00000449864 DIP2CQ9Y2E4 1556 aa25.11■■□□□ 1.61
HDLBP-223ENST00000449864 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
HDLBP-223ENST00000449864 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
HDLBP-223ENST00000449864 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
HDLBP-223ENST00000449864 ATP10AO60312 1499 aa25.09■■□□□ 1.61
HDLBP-223ENST00000449864 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
HDLBP-223ENST00000449864 TRAPPC8Q9Y2L5 1435 aa25.09■■□□□ 1.61
HDLBP-223ENST00000449864 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.6
HDLBP-223ENST00000449864 PLEKHH2Q8IVE3 1493 aa25.07■■□□□ 1.6
HDLBP-223ENST00000449864 CFDP1Q9UEE9 299 aaPredicted RBP25.06■■□□□ 1.6
HDLBP-223ENST00000449864 PTPRMP28827 1452 aa25.06■■□□□ 1.6
HDLBP-223ENST00000449864 MLH3Q9UHC1 1453 aa25.06■■□□□ 1.6
HDLBP-223ENST00000449864 NCOA2Q15596 1464 aa25.04■■□□□ 1.6
HDLBP-223ENST00000449864 REREQ9P2R6 1566 aa25.04■■□□□ 1.6
HDLBP-223ENST00000449864 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
HDLBP-223ENST00000449864 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
HDLBP-223ENST00000449864 INO80Q9ULG1 1556 aaPredicted RBP25■■□□□ 1.59
HDLBP-223ENST00000449864 KIAA1107Q9UPP5 1409 aa24.99■■□□□ 1.59
HDLBP-223ENST00000449864 ATP7AQ04656 1500 aa24.98■■□□□ 1.59
HDLBP-223ENST00000449864 MLECQ14165 292 aa24.97■■□□□ 1.59
HDLBP-223ENST00000449864 HNRNPMP52272 730 aaKnown RBP eCLIP24.96■■□□□ 1.591e-10■□□□□ 10.4
HDLBP-223ENST00000449864 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
HDLBP-223ENST00000449864 ADGBQ8N7X0 1667 aa24.94■■□□□ 1.58
HDLBP-223ENST00000449864 SPAG9O60271 1321 aaKnown RBP24.93■■□□□ 1.58
HDLBP-223ENST00000449864 AGLP35573 1532 aa24.91■■□□□ 1.58
HDLBP-223ENST00000449864 ZNF644Q9H582 1327 aaPredicted RBP24.9■■□□□ 1.58
HDLBP-223ENST00000449864 APLP2Q06481 763 aa24.88■■□□□ 1.57
HDLBP-223ENST00000449864 MBD5Q9P267 1494 aa24.87■■□□□ 1.57
HDLBP-223ENST00000449864 PLPPR3Q6T4P5 718 aa24.86■■□□□ 1.57
HDLBP-223ENST00000449864 PLXNC1O60486 1568 aa24.85■■□□□ 1.57
HDLBP-223ENST00000449864 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
HDLBP-223ENST00000449864 KANK4Q5T7N3 995 aaPredicted RBP24.85■■□□□ 1.57
HDLBP-223ENST00000449864 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
HDLBP-223ENST00000449864 A2MP01023 1474 aa24.82■■□□□ 1.56
HDLBP-223ENST00000449864 C3P01024 1663 aa24.81■■□□□ 1.56
HDLBP-223ENST00000449864 MYOM3Q5VTT5 1437 aa24.81■■□□□ 1.56
HDLBP-223ENST00000449864 PREX1Q8TCU6 1659 aa24.81■■□□□ 1.56
HDLBP-223ENST00000449864 MROH2AA6NES4 1674 aa24.78■■□□□ 1.56
HDLBP-223ENST00000449864 RTEL1-TNFRSF6BF6WH68 1400 aa24.78■■□□□ 1.56
HDLBP-223ENST00000449864 LMTK3Q96Q04 1460 aa24.77■■□□□ 1.56
HDLBP-223ENST00000449864 CLTCQ00610 1675 aaKnown RBP24.76■■□□□ 1.55
HDLBP-223ENST00000449864 ESF1Q9H501 851 aaKnown RBP24.76■■□□□ 1.55
HDLBP-223ENST00000449864 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
HDLBP-223ENST00000449864 PTPN23Q9H3S7 1636 aa24.74■■□□□ 1.55
HDLBP-223ENST00000449864 CROCC2H7BZ55 1655 aa24.74■■□□□ 1.55
HDLBP-223ENST00000449864 RSPH4AQ5TD94 716 aa24.73■■□□□ 1.55
HDLBP-223ENST00000449864 MAST1Q9Y2H9 1570 aa24.72■■□□□ 1.55
HDLBP-223ENST00000449864 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
HDLBP-223ENST00000449864 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
HDLBP-223ENST00000449864 CEBPAP49715 358 aaPredicted RBP24.68■■□□□ 1.54
HDLBP-223ENST00000449864 TSPY4P0CV99 314 aa24.66■■□□□ 1.54
HDLBP-223ENST00000449864 TSPY10P0CW01 314 aa24.66■■□□□ 1.54
HDLBP-223ENST00000449864 DHX29Q7Z478 1369 aaKnown RBP24.64■■□□□ 1.53
HDLBP-223ENST00000449864 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
HDLBP-223ENST00000449864 DNMT1P26358 1616 aaKnown RBP24.63■■□□□ 1.53
HDLBP-223ENST00000449864 GGT6Q6P531 493 aa24.62■■□□□ 1.53
HDLBP-223ENST00000449864 EIF2AK4Q9P2K8 1649 aaKnown RBP24.61■■□□□ 1.53
HDLBP-223ENST00000449864 UHRF1BP1Q6BDS2 1440 aa24.61■■□□□ 1.53
HDLBP-223ENST00000449864 TCOF1Q13428 1488 aaKnown RBP24.59■■□□□ 1.53
HDLBP-223ENST00000449864 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.53
HDLBP-223ENST00000449864 HSPA2P54652 639 aa24.58■■□□□ 1.53
HDLBP-223ENST00000449864 RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
HDLBP-223ENST00000449864 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
HDLBP-223ENST00000449864 FAM135AQ9P2D6 1515 aa24.56■■□□□ 1.52
HDLBP-223ENST00000449864 MYO3AQ8NEV4 1616 aa24.55■■□□□ 1.52
HDLBP-223ENST00000449864 KIF3BO15066 747 aa24.55■■□□□ 1.52
HDLBP-223ENST00000449864 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
HDLBP-223ENST00000449864 ZC3H13Q5T200 1668 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 878.7 ms