RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	NISCH	Q9Y2I1	1504 aa		38.86	■■■■□ 3.81
HDLBP-223	ENST00000449864	CCDC180	Q9P1Z9	1646 aa		34.83	■■■■□ 3.17
HDLBP-223	ENST00000449864	ABCC9	O60706	1549 aa		34.19	■■■■□ 3.06
HDLBP-223	ENST00000449864	RB1CC1	Q8TDY2	1594 aa		32.83	■■■□□ 2.85
HDLBP-223	ENST00000449864	NACAD	O15069	1562 aa		32.7	■■■□□ 2.82
HDLBP-223	ENST00000449864	DCAF8L2	P0C7V8	631 aa		32.52	■■■□□ 2.8
HDLBP-223	ENST00000449864	MYO15B	Q96JP2	1530 aa		32.36	■■■□□ 2.77
HDLBP-223	ENST00000449864	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.33	■■■□□ 2.77
HDLBP-223	ENST00000449864	UNC13A	Q9UPW8	1703 aa		32.24	■■■□□ 2.75
HDLBP-223	ENST00000449864	DCAF1	Q9Y4B6	1507 aa		32.14	■■■□□ 2.74
HDLBP-223	ENST00000449864	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
HDLBP-223	ENST00000449864	BICRA	Q9NZM4	1560 aa		31.81	■■■□□ 2.68
HDLBP-223	ENST00000449864	SCRIB	Q14160	1630 aa		31.72	■■■□□ 2.67
HDLBP-223	ENST00000449864	DNAJC5B	Q9UF47	199 aa		31.45	■■■□□ 2.63
HDLBP-223	ENST00000449864	SHROOM4	Q9ULL8	1493 aa		31.45	■■■□□ 2.62
HDLBP-223	ENST00000449864	EIF4G1	Q04637	1599 aa	Known RBP	31	■■■□□ 2.55
HDLBP-223	ENST00000449864	CC2D2A	Q9P2K1	1620 aa		30.96	■■■□□ 2.55
HDLBP-223	ENST00000449864	CECR2	Q9BXF3	1484 aa		30.73	■■■□□ 2.51
HDLBP-223	ENST00000449864	SMARCA4	P51532	1647 aa		30.29	■■■□□ 2.44
HDLBP-223	ENST00000449864	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.2	■■■□□ 2.42
HDLBP-223	ENST00000449864	SMARCA2	P51531	1590 aa		30.11	■■■□□ 2.41
HDLBP-223	ENST00000449864	NCAPD3	P42695	1498 aa		30.08	■■■□□ 2.41
HDLBP-223	ENST00000449864	ATAD2B	Q9ULI0	1458 aa		30.08	■■■□□ 2.41
HDLBP-223	ENST00000449864	HMGXB3	Q12766	1538 aa		30.01	■■■□□ 2.39
HDLBP-223	ENST00000449864	PEG3	Q9GZU2	1588 aa		29.95	■■■□□ 2.39
HDLBP-223	ENST00000449864	MROH2B	Q7Z745	1585 aa		29.94	■■■□□ 2.38
HDLBP-223	ENST00000449864	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.89	■■■□□ 2.38
HDLBP-223	ENST00000449864	WIZ	O95785	1651 aa		29.7	■■■□□ 2.35
HDLBP-223	ENST00000449864	ERCC6	Q03468	1493 aa		29.52	■■■□□ 2.32
HDLBP-223	ENST00000449864	NES	P48681	1621 aa		29.5	■■■□□ 2.31
HDLBP-223	ENST00000449864	RSF1	Q96T23	1441 aa	Predicted RBP	29.45	■■■□□ 2.31
HDLBP-223	ENST00000449864	LAMC3	Q9Y6N6	1575 aa		29.45	■■■□□ 2.31
HDLBP-223	ENST00000449864	TOP2A	P11388	1531 aa	Known RBP	29.34	■■■□□ 2.29
HDLBP-223	ENST00000449864	KIF21A	Q7Z4S6	1674 aa		29.31	■■■□□ 2.28
HDLBP-223	ENST00000449864	CUX2	O14529	1486 aa		29.27	■■■□□ 2.28
HDLBP-223	ENST00000449864	THOC2	Q8NI27	1593 aa	Known RBP	29.19	■■■□□ 2.26
HDLBP-223	ENST00000449864	PDS5B	Q9NTI5	1447 aa		29.18	■■■□□ 2.26
HDLBP-223	ENST00000449864	CADPS	Q9ULU8	1353 aa		29.17	■■■□□ 2.26
HDLBP-223	ENST00000449864	PRDM2	Q13029	1718 aa		29.04	■■■□□ 2.24
HDLBP-223	ENST00000449864	CFTR	P13569	1480 aa		28.97	■■■□□ 2.23
HDLBP-223	ENST00000449864	MRC2	Q9UBG0	1479 aa		28.94	■■■□□ 2.22
HDLBP-223	ENST00000449864	CEP164	Q9UPV0	1460 aa		28.94	■■■□□ 2.22
HDLBP-223	ENST00000449864	CCDC88B	A6NC98	1476 aa		28.91	■■■□□ 2.22
HDLBP-223	ENST00000449864	FANCD2	Q9BXW9	1451 aa		28.91	■■■□□ 2.22
HDLBP-223	ENST00000449864	WDR62	O43379	1518 aa		28.86	■■■□□ 2.21
HDLBP-223	ENST00000449864	URB2	Q14146	1524 aa	Known RBP	28.64	■■■□□ 2.18
HDLBP-223	ENST00000449864	DNAJC5	Q9H3Z4	198 aa		28.55	■■■□□ 2.16
HDLBP-223	ENST00000449864	SUPT5H	O00267	1087 aa	Known RBP	28.52	■■■□□ 2.16
HDLBP-223	ENST00000449864	TOPBP1	Q92547	1522 aa		28.43	■■■□□ 2.14
HDLBP-223	ENST00000449864	DNMBP	Q6XZF7	1577 aa		28.43	■■■□□ 2.14
HDLBP-223	ENST00000449864	ABCC8	Q09428	1581 aa		28.41	■■■□□ 2.14
HDLBP-223	ENST00000449864	IFT140	Q96RY7	1462 aa		28.31	■■■□□ 2.12
HDLBP-223	ENST00000449864	EIF4G3	O43432	1585 aa	Known RBP	28.2	■■■□□ 2.1
HDLBP-223	ENST00000449864	ZNF608	Q9ULD9	1512 aa	Predicted RBP	28.18	■■■□□ 2.1
HDLBP-223	ENST00000449864	TARBP1	Q13395	1621 aa	Known RBP	28.18	■■■□□ 2.1
HDLBP-223	ENST00000449864	POLA1	P09884	1462 aa	Predicted RBP	28.16	■■■□□ 2.1
HDLBP-223	ENST00000449864	CUX1	P39880	1505 aa		28.13	■■■□□ 2.09
HDLBP-223	ENST00000449864	FGD5	Q6ZNL6	1462 aa		28.08	■■■□□ 2.09
HDLBP-223	ENST00000449864	RAD54L2	Q9Y4B4	1467 aa		28.02	■■■□□ 2.08
HDLBP-223	ENST00000449864	SOGA1	O94964	1423 aa		28.01	■■■□□ 2.07
HDLBP-223	ENST00000449864	WDR97	A6NE52	1622 aa		27.98	■■■□□ 2.07
HDLBP-223	ENST00000449864	AQR	O60306	1485 aa	Known RBP eCLIP	27.96	■■■□□ 2.07	2e-16	■■■■□ 25
HDLBP-223	ENST00000449864	CHD1	O14646	1710 aa		27.96	■■■□□ 2.07
HDLBP-223	ENST00000449864	OSCAR	Q8IYS5	282 aa		27.92	■■■□□ 2.06
HDLBP-223	ENST00000449864	BIVM-ERCC5	R4GMW8	1640 aa		27.91	■■■□□ 2.06
HDLBP-223	ENST00000449864	PBRM1	Q86U86	1689 aa		27.87	■■■□□ 2.05
HDLBP-223	ENST00000449864	TDRD9	Q8NDG6	1382 aa	Known RBP	27.86	■■■□□ 2.05
HDLBP-223	ENST00000449864	TOP2B	Q02880	1626 aa		27.86	■■■□□ 2.05
HDLBP-223	ENST00000449864	SYNJ1	O43426	1573 aa		27.84	■■■□□ 2.05
HDLBP-223	ENST00000449864	WRN	Q14191	1432 aa	Predicted RBP eCLIP	27.83	■■■□□ 2.05
HDLBP-223	ENST00000449864	SNAPC4	Q5SXM2	1469 aa		27.77	■■■□□ 2.04
HDLBP-223	ENST00000449864	ABCA5	Q8WWZ7	1642 aa		27.77	■■■□□ 2.04
HDLBP-223	ENST00000449864	ABCA10	Q8WWZ4	1543 aa		27.77	■■■□□ 2.04
HDLBP-223	ENST00000449864	GRIN2B	Q13224	1484 aa		27.75	■■■□□ 2.03
HDLBP-223	ENST00000449864	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.72	■■■□□ 2.03
HDLBP-223	ENST00000449864	GAPVD1	Q14C86	1478 aa		27.71	■■■□□ 2.03
HDLBP-223	ENST00000449864	FBLN2	P98095	1184 aa		27.69	■■■□□ 2.02
HDLBP-223	ENST00000449864	RIMBP3C	A6NJZ7	1639 aa		27.67	■■■□□ 2.02
HDLBP-223	ENST00000449864	RIMBP3B	A6NNM3	1639 aa		27.67	■■■□□ 2.02
HDLBP-223	ENST00000449864	RIMBP3	Q9UFD9	1639 aa		27.67	■■■□□ 2.02
HDLBP-223	ENST00000449864	SYNJ2	O15056	1496 aa		27.61	■■■□□ 2.01
HDLBP-223	ENST00000449864	TRIM41	Q8WV44	630 aa		27.58	■■■□□ 2.01
HDLBP-223	ENST00000449864	ARHGEF11	O15085	1522 aa		27.57	■■■□□ 2
HDLBP-223	ENST00000449864	CHMP7	Q8WUX9	453 aa	Predicted RBP	27.56	■■■□□ 2
HDLBP-223	ENST00000449864	ADAMTS12	P58397	1594 aa		27.52	■■■□□ 2
HDLBP-223	ENST00000449864	CLASP1	Q7Z460	1538 aa		27.51	■■□□□ 1.99
HDLBP-223	ENST00000449864	ERICH3	Q5RHP9	1530 aa		27.46	■■□□□ 1.99
HDLBP-223	ENST00000449864	GRIN2A	Q12879	1464 aa		27.41	■■□□□ 1.98
HDLBP-223	ENST00000449864	FHAD1	B1AJZ9	1412 aa		27.37	■■□□□ 1.97
HDLBP-223	ENST00000449864	CEP170	Q5SW79	1584 aa		27.32	■■□□□ 1.96
HDLBP-223	ENST00000449864	ARAP1	Q96P48	1450 aa		27.32	■■□□□ 1.96
HDLBP-223	ENST00000449864	CUL7	Q14999	1698 aa		27.27	■■□□□ 1.96
HDLBP-223	ENST00000449864	KIF27	Q86VH2	1401 aa		27.26	■■□□□ 1.95
HDLBP-223	ENST00000449864	NUP160	Q12769	1436 aa		27.24	■■□□□ 1.95
HDLBP-223	ENST00000449864	CYB5RL	Q6IPT4	315 aa		27.23	■■□□□ 1.95
HDLBP-223	ENST00000449864	SHROOM2	Q13796	1616 aa		27.18	■■□□□ 1.94
HDLBP-223	ENST00000449864	RUSC2	Q8N2Y8	1516 aa		27.14	■■□□□ 1.94
HDLBP-223	ENST00000449864	ERCC6L2	Q5T890	1561 aa		27.1	■■□□□ 1.93
HDLBP-223	ENST00000449864	IGF1R	P08069	1367 aa		27.09	■■□□□ 1.93
HDLBP-223	ENST00000449864	CARMIL1	Q5VZK9	1371 aa		26.97	■■□□□ 1.91

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