RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 EFCAB2Q5VUJ9 269 aa19.13■□□□□ 0.65
COPS7B-213ENST00000449174 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
COPS7B-213ENST00000449174 CLIP1P30622 1438 aa19.13■□□□□ 0.65
COPS7B-213ENST00000449174 TROQ12816 1431 aaPredicted RBP19.13■□□□□ 0.65
COPS7B-213ENST00000449174 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
COPS7B-213ENST00000449174 RIMS1Q86UR5 1692 aaKnown RBP19.13■□□□□ 0.65
COPS7B-213ENST00000449174 YEATS2Q9ULM3 1422 aa19.11■□□□□ 0.65
COPS7B-213ENST00000449174 LMTK3Q96Q04 1460 aa19.09■□□□□ 0.65
COPS7B-213ENST00000449174 CCDC18Q5T9S5 1454 aa19.08■□□□□ 0.64
COPS7B-213ENST00000449174 ZNF518AQ6AHZ1 1483 aa19.08■□□□□ 0.64
COPS7B-213ENST00000449174 ARHGAP5Q13017 1502 aa19.07■□□□□ 0.64
COPS7B-213ENST00000449174 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
COPS7B-213ENST00000449174 SIGLEC1Q9BZZ2 1709 aa19.07■□□□□ 0.64
COPS7B-213ENST00000449174 ATP10AO60312 1499 aa19.07■□□□□ 0.64
COPS7B-213ENST00000449174 C9orf84Q5VXU9 1444 aa19.07■□□□□ 0.64
COPS7B-213ENST00000449174 FER1L4A9Z1Z3 1794 aa19.05■□□□□ 0.64
COPS7B-213ENST00000449174 CASKIN1Q8WXD9 1431 aa19.05■□□□□ 0.64
COPS7B-213ENST00000449174 KDM5CP41229 1560 aa19.04■□□□□ 0.64
COPS7B-213ENST00000449174 ARHGEF12Q9NZN5 1544 aa19.02■□□□□ 0.64
COPS7B-213ENST00000449174 PREX2Q70Z35 1606 aa19■□□□□ 0.63
COPS7B-213ENST00000449174 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
COPS7B-213ENST00000449174 REREQ9P2R6 1566 aa18.99■□□□□ 0.63
COPS7B-213ENST00000449174 FYCO1Q9BQS8 1478 aa18.99■□□□□ 0.63
COPS7B-213ENST00000449174 MLECQ14165 292 aa18.98■□□□□ 0.63
COPS7B-213ENST00000449174 FBXO41Q8TF61 875 aa18.98■□□□□ 0.63
COPS7B-213ENST00000449174 MLH3Q9UHC1 1453 aa18.97■□□□□ 0.63
COPS7B-213ENST00000449174 ABCC1P33527 1531 aa18.96■□□□□ 0.63
COPS7B-213ENST00000449174 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
COPS7B-213ENST00000449174 DIP2CQ9Y2E4 1556 aa18.95■□□□□ 0.62
COPS7B-213ENST00000449174 ITSN2Q9NZM3 1697 aa18.94■□□□□ 0.62
COPS7B-213ENST00000449174 PREX1Q8TCU6 1659 aa18.93■□□□□ 0.62
COPS7B-213ENST00000449174 CDC42BPAQ5VT25 1732 aa18.92■□□□□ 0.62
COPS7B-213ENST00000449174 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
COPS7B-213ENST00000449174 MYT1LQ9UL68 1186 aa18.92■□□□□ 0.62
COPS7B-213ENST00000449174 AGLP35573 1532 aa18.91■□□□□ 0.62
COPS7B-213ENST00000449174 ABCA6Q8N139 1617 aa18.91■□□□□ 0.62
COPS7B-213ENST00000449174 HSPA2P54652 639 aa18.89■□□□□ 0.61
COPS7B-213ENST00000449174 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
COPS7B-213ENST00000449174 KIDINS220Q9ULH0 1771 aa18.85■□□□□ 0.61
COPS7B-213ENST00000449174 GPATCH8Q9UKJ3 1502 aaKnown RBP18.84■□□□□ 0.61
COPS7B-213ENST00000449174 UHRF1BP1Q6BDS2 1440 aa18.83■□□□□ 0.61
COPS7B-213ENST00000449174 ESF1Q9H501 851 aaKnown RBP18.83■□□□□ 0.6
COPS7B-213ENST00000449174 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.6
COPS7B-213ENST00000449174 PLEKHH2Q8IVE3 1493 aa18.83■□□□□ 0.6
COPS7B-213ENST00000449174 CNTLNQ9NXG0 1405 aa18.82■□□□□ 0.6
COPS7B-213ENST00000449174 KIAA1107Q9UPP5 1409 aa18.82■□□□□ 0.6
COPS7B-213ENST00000449174 CEBPAP49715 358 aaPredicted RBP18.81■□□□□ 0.6
COPS7B-213ENST00000449174 C3P01024 1663 aa18.81■□□□□ 0.6
COPS7B-213ENST00000449174 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
COPS7B-213ENST00000449174 SYCP2Q9BX26 1530 aa18.8■□□□□ 0.6
COPS7B-213ENST00000449174 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
COPS7B-213ENST00000449174 ZNF777Q9ULD5 760 aaPredicted RBP18.78■□□□□ 0.6
COPS7B-213ENST00000449174 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
COPS7B-213ENST00000449174 MTUS2Q5JR59 1369 aa18.77■□□□□ 0.6
COPS7B-213ENST00000449174 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
COPS7B-213ENST00000449174 ATP7AQ04656 1500 aa18.76■□□□□ 0.59
COPS7B-213ENST00000449174 CFDP1Q9UEE9 299 aaPredicted RBP18.76■□□□□ 0.59
COPS7B-213ENST00000449174 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
COPS7B-213ENST00000449174 CERKQ8TCT0 537 aa18.75■□□□□ 0.59
COPS7B-213ENST00000449174 INO80Q9ULG1 1556 aaPredicted RBP18.75■□□□□ 0.59
COPS7B-213ENST00000449174 STRCQ7RTU9 1775 aa18.75■□□□□ 0.59
COPS7B-213ENST00000449174 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
COPS7B-213ENST00000449174 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
COPS7B-213ENST00000449174 HNRNPMP52272 730 aaKnown RBP eCLIP18.72■□□□□ 0.591e-6■□□□□ 11.1
COPS7B-213ENST00000449174 NPATQ14207 1427 aa18.72■□□□□ 0.59
COPS7B-213ENST00000449174 SUPT6HQ7KZ85 1726 aaKnown RBP18.71■□□□□ 0.59
COPS7B-213ENST00000449174 A2MP01023 1474 aa18.71■□□□□ 0.59
COPS7B-213ENST00000449174 PTPRTO14522 1441 aa18.7■□□□□ 0.58
COPS7B-213ENST00000449174 TIAM1Q13009 1591 aa18.7■□□□□ 0.58
COPS7B-213ENST00000449174 CEP162Q5TB80 1403 aa18.69■□□□□ 0.58
COPS7B-213ENST00000449174 ADGBQ8N7X0 1667 aa18.69■□□□□ 0.58
COPS7B-213ENST00000449174 ZMYM3Q14202 1370 aa18.67■□□□□ 0.58
COPS7B-213ENST00000449174 PPP6R1Q9UPN7 881 aa18.66■□□□□ 0.58
COPS7B-213ENST00000449174 RTEL1-TNFRSF6BF6WH68 1400 aa18.65■□□□□ 0.58
COPS7B-213ENST00000449174 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
COPS7B-213ENST00000449174 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
COPS7B-213ENST00000449174 NCOA1Q15788 1441 aa18.64■□□□□ 0.57
COPS7B-213ENST00000449174 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
COPS7B-213ENST00000449174 CAMSAP1Q5T5Y3 1602 aa18.6■□□□□ 0.57
COPS7B-213ENST00000449174 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
COPS7B-213ENST00000449174 MYO3AQ8NEV4 1616 aa18.6■□□□□ 0.57
COPS7B-213ENST00000449174 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
COPS7B-213ENST00000449174 NCOA2Q15596 1464 aa18.58■□□□□ 0.57
COPS7B-213ENST00000449174 CCDC141Q6ZP82 1450 aa18.58■□□□□ 0.57
COPS7B-213ENST00000449174 PTPRKQ15262 1439 aa18.58■□□□□ 0.57
COPS7B-213ENST00000449174 GGT6Q6P531 493 aa18.58■□□□□ 0.56
COPS7B-213ENST00000449174 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
COPS7B-213ENST00000449174 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
COPS7B-213ENST00000449174 DHX29Q7Z478 1369 aaKnown RBP18.57■□□□□ 0.56
COPS7B-213ENST00000449174 PLA2R1Q13018 1463 aa18.57■□□□□ 0.56
COPS7B-213ENST00000449174 CAMSAP2Q08AD1 1489 aa18.56■□□□□ 0.56
COPS7B-213ENST00000449174 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
COPS7B-213ENST00000449174 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
COPS7B-213ENST00000449174 ARHGEF5Q12774 1597 aa18.53■□□□□ 0.56
COPS7B-213ENST00000449174 PKD2Q13563 968 aa18.53■□□□□ 0.56
COPS7B-213ENST00000449174 VPS8Q8N3P4 1428 aa18.51■□□□□ 0.55
COPS7B-213ENST00000449174 KDM5DQ9BY66 1539 aa18.51■□□□□ 0.55
COPS7B-213ENST00000449174 TCOF1Q13428 1488 aaKnown RBP18.5■□□□□ 0.55
COPS7B-213ENST00000449174 A2ML1A8K2U0 1454 aa18.49■□□□□ 0.55
COPS7B-213ENST00000449174 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms