RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 STK26Q9P289 416 aa13.94□□□□□ -0.18
SP4-204ENST00000448246 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
SP4-204ENST00000448246 TMF1P82094 1093 aa13.93□□□□□ -0.18
SP4-204ENST00000448246 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
SP4-204ENST00000448246 SRPK2P78362 688 aaKnown RBP13.92□□□□□ -0.18
SP4-204ENST00000448246 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
SP4-204ENST00000448246 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.18
SP4-204ENST00000448246 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
SP4-204ENST00000448246 DHX57Q6P158 1386 aaKnown RBP13.9□□□□□ -0.18
SP4-204ENST00000448246 RTL5Q5HYW3 569 aaPredicted RBP13.89□□□□□ -0.19
SP4-204ENST00000448246 NPM2Q86SE8 214 aaKnown RBP13.89□□□□□ -0.19
SP4-204ENST00000448246 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
SP4-204ENST00000448246 ZNF644Q9H582 1327 aaPredicted RBP13.88□□□□□ -0.19
SP4-204ENST00000448246 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
SP4-204ENST00000448246 PRXQ9BXM0 1461 aa13.86□□□□□ -0.19
SP4-204ENST00000448246 UNC13AQ9UPW8 1703 aa13.86□□□□□ -0.19
SP4-204ENST00000448246 IRX6P78412 446 aaPredicted RBP13.85□□□□□ -0.19
SP4-204ENST00000448246 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
SP4-204ENST00000448246 NUTM2DQ5VT03 806 aaPredicted RBP13.84□□□□□ -0.19
SP4-204ENST00000448246 L3MBTL2Q969R5 705 aa13.84□□□□□ -0.19
SP4-204ENST00000448246 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
SP4-204ENST00000448246 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.84□□□□□ -0.19
SP4-204ENST00000448246 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
SP4-204ENST00000448246 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.19
SP4-204ENST00000448246 SYNJ2O15056 1496 aa13.83□□□□□ -0.2
SP4-204ENST00000448246 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
SP4-204ENST00000448246 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
SP4-204ENST00000448246 CASKIN1Q8WXD9 1431 aa13.82□□□□□ -0.2
SP4-204ENST00000448246 AFAP1Q8N556 730 aa13.82□□□□□ -0.2
SP4-204ENST00000448246 SOX12O15370 315 aa13.81□□□□□ -0.2
SP4-204ENST00000448246 HSPA5P11021 654 aaKnown RBP13.81□□□□□ -0.2
SP4-204ENST00000448246 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
SP4-204ENST00000448246 KIF21BO75037 1637 aa13.81□□□□□ -0.2
SP4-204ENST00000448246 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
SP4-204ENST00000448246 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
SP4-204ENST00000448246 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
SP4-204ENST00000448246 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
SP4-204ENST00000448246 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
SP4-204ENST00000448246 KIAA0586Q9BVV6 1533 aa13.78□□□□□ -0.2
SP4-204ENST00000448246 MAPK8IP3Q9UPT6 1336 aa13.78□□□□□ -0.2
SP4-204ENST00000448246 FGD6Q6ZV73 1430 aa13.78□□□□□ -0.2
SP4-204ENST00000448246 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
SP4-204ENST00000448246 CCDC144AA2RUR9 1427 aa13.77□□□□□ -0.21
SP4-204ENST00000448246 HDGFL2Q7Z4V5 671 aaPredicted RBP13.77□□□□□ -0.21
SP4-204ENST00000448246 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
SP4-204ENST00000448246 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
SP4-204ENST00000448246 KIF15Q9NS87 1388 aa13.76□□□□□ -0.21
SP4-204ENST00000448246 LRRC9Q6ZRR7 1453 aa13.76□□□□□ -0.21
SP4-204ENST00000448246 MORC1Q86VD1 984 aa13.76□□□□□ -0.21
SP4-204ENST00000448246 VGFO15240 615 aaPredicted RBP13.75□□□□□ -0.21
SP4-204ENST00000448246 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
SP4-204ENST00000448246 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
SP4-204ENST00000448246 TRAK1Q9UPV9 953 aa13.74□□□□□ -0.21
SP4-204ENST00000448246 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
SP4-204ENST00000448246 NBR1Q14596 966 aa13.73□□□□□ -0.21
SP4-204ENST00000448246 CCDC136Q96JN2 1154 aa13.73□□□□□ -0.21
SP4-204ENST00000448246 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
SP4-204ENST00000448246 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
SP4-204ENST00000448246 FYCO1Q9BQS8 1478 aa13.72□□□□□ -0.21
SP4-204ENST00000448246 ARXQ96QS3 562 aa13.71□□□□□ -0.22
SP4-204ENST00000448246 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
SP4-204ENST00000448246 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
SP4-204ENST00000448246 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
SP4-204ENST00000448246 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
SP4-204ENST00000448246 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
SP4-204ENST00000448246 TROQ12816 1431 aaPredicted RBP13.69□□□□□ -0.22
SP4-204ENST00000448246 UACAQ9BZF9 1416 aa13.69□□□□□ -0.22
SP4-204ENST00000448246 ANKRD50Q9ULJ7 1429 aa13.69□□□□□ -0.22
SP4-204ENST00000448246 NGDNQ8NEJ9 315 aaKnown RBP13.68□□□□□ -0.22
SP4-204ENST00000448246 GRIN2AQ12879 1464 aa13.68□□□□□ -0.22
SP4-204ENST00000448246 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
SP4-204ENST00000448246 PPP4R2Q9NY27 417 aa13.68□□□□□ -0.22
SP4-204ENST00000448246 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
SP4-204ENST00000448246 RAPGEF3O95398 923 aa13.67□□□□□ -0.22
SP4-204ENST00000448246 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
SP4-204ENST00000448246 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
SP4-204ENST00000448246 SCAPERQ9BY12 1400 aa13.64□□□□□ -0.23
SP4-204ENST00000448246 IQGAP2Q13576 1575 aa13.64□□□□□ -0.23
SP4-204ENST00000448246 KTN1Q86UP2 1357 aaKnown RBP13.63□□□□□ -0.23
SP4-204ENST00000448246 DEKP35659 375 aaKnown RBP13.62□□□□□ -0.23
SP4-204ENST00000448246 CSB-PGBD3P0DP91 1061 aa13.61□□□□□ -0.23
SP4-204ENST00000448246 UPF2Q9HAU5 1272 aaKnown RBP13.61□□□□□ -0.23
SP4-204ENST00000448246 B4GALNT3Q6L9W6 998 aa13.61□□□□□ -0.23
SP4-204ENST00000448246 U2AF1L5P0DN76 240 aaPredicted RBP13.6□□□□□ -0.23
SP4-204ENST00000448246 U2AF1Q01081 240 aaKnown RBP eCLIP13.6□□□□□ -0.23
SP4-204ENST00000448246 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.6□□□□□ -0.23
SP4-204ENST00000448246 FANCIQ9NVI1 1328 aa13.6□□□□□ -0.23
SP4-204ENST00000448246 NOP58Q9Y2X3 529 aaKnown RBP13.59□□□□□ -0.23
SP4-204ENST00000448246 PLB1Q6P1J6 1458 aa13.59□□□□□ -0.23
SP4-204ENST00000448246 AEBP2Q6ZN18 517 aaPredicted RBP13.59□□□□□ -0.23
SP4-204ENST00000448246 MIA2Q96PC5 1412 aa13.59□□□□□ -0.23
SP4-204ENST00000448246 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
SP4-204ENST00000448246 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
SP4-204ENST00000448246 MINK1Q8N4C8 1332 aaPredicted RBP13.58□□□□□ -0.24
SP4-204ENST00000448246 FTSJ3Q8IY81 847 aaKnown RBP13.58□□□□□ -0.24
SP4-204ENST00000448246 STAC3Q96MF2 364 aa13.58□□□□□ -0.24
SP4-204ENST00000448246 EPRSP07814 1512 aaKnown RBP13.57□□□□□ -0.24
SP4-204ENST00000448246 CUL7Q14999 1698 aa13.57□□□□□ -0.24
SP4-204ENST00000448246 RALBP1Q15311 655 aa13.57□□□□□ -0.24
SP4-204ENST00000448246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms