RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 DHX37Q8IY37 1157 aaKnown RBP20.56■□□□□ 0.88
SIK3-205ENST00000446921 RCAN3Q9UKA8 241 aa20.56■□□□□ 0.88
SIK3-205ENST00000446921 PANK2Q9BZ23 570 aa20.55■□□□□ 0.88
SIK3-205ENST00000446921 ANP32BQ92688 251 aaKnown RBP20.55■□□□□ 0.88
SIK3-205ENST00000446921 PLIN1O60240 522 aa20.55■□□□□ 0.88
SIK3-205ENST00000446921 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
SIK3-205ENST00000446921 BECN1Q14457 450 aa20.53■□□□□ 0.88
SIK3-205ENST00000446921 PRDM10Q9NQV6 1147 aa20.51■□□□□ 0.87
SIK3-205ENST00000446921 ESPNB1AK53 854 aa20.5■□□□□ 0.87
SIK3-205ENST00000446921 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
SIK3-205ENST00000446921 MAPK8IP2Q13387 824 aaPredicted RBP20.5■□□□□ 0.87
SIK3-205ENST00000446921 TPM2P07951 284 aa20.5■□□□□ 0.87
SIK3-205ENST00000446921 XRCC6P12956 609 aaKnown RBP eCLIP20.5■□□□□ 0.873e-6■■□□□ 14.4
SIK3-205ENST00000446921 KIAA1211Q6ZU35 1233 aa20.48■□□□□ 0.87
SIK3-205ENST00000446921 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
SIK3-205ENST00000446921 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
SIK3-205ENST00000446921 VGLL3A8MV65 326 aa20.46■□□□□ 0.87
SIK3-205ENST00000446921 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
SIK3-205ENST00000446921 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
SIK3-205ENST00000446921 RRBP1Q9P2E9 1410 aaKnown RBP20.41■□□□□ 0.86
SIK3-205ENST00000446921 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
SIK3-205ENST00000446921 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
SIK3-205ENST00000446921 DNTTIP2Q5QJE6 756 aaKnown RBP20.4■□□□□ 0.86
SIK3-205ENST00000446921 KIF21BO75037 1637 aa20.39■□□□□ 0.85
SIK3-205ENST00000446921 MSNP26038 577 aaKnown RBP20.38■□□□□ 0.85
SIK3-205ENST00000446921 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
SIK3-205ENST00000446921 WIZO95785 1651 aa20.37■□□□□ 0.85
SIK3-205ENST00000446921 IPO4Q8TEX9 1081 aaKnown RBP20.36■□□□□ 0.85
SIK3-205ENST00000446921 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
SIK3-205ENST00000446921 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
SIK3-205ENST00000446921 R3HCC1Q9Y3T6 440 aaKnown RBP20.35■□□□□ 0.85
SIK3-205ENST00000446921 MRE11P49959 708 aa20.34■□□□□ 0.85
SIK3-205ENST00000446921 PRDM4Q9UKN5 801 aa20.34■□□□□ 0.85
SIK3-205ENST00000446921 GTF2E1P29083 439 aaPredicted RBP20.33■□□□□ 0.85
SIK3-205ENST00000446921 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
SIK3-205ENST00000446921 RNF123Q5XPI4 1314 aa20.31■□□□□ 0.84
SIK3-205ENST00000446921 STAC3Q96MF2 364 aa20.3■□□□□ 0.84
SIK3-205ENST00000446921 GRPEL1Q9HAV7 217 aa20.28■□□□□ 0.84
SIK3-205ENST00000446921 TRAK2O60296 914 aa20.27■□□□□ 0.84
SIK3-205ENST00000446921 MAP7D2Q96T17 732 aa20.27■□□□□ 0.84
SIK3-205ENST00000446921 E9PSI1 815 aa20.27■□□□□ 0.84
SIK3-205ENST00000446921 CHMP4AQ9BY43 222 aa20.27■□□□□ 0.84
SIK3-205ENST00000446921 BRD2P25440 801 aaKnown RBP20.27■□□□□ 0.83
SIK3-205ENST00000446921 CCDC7Q96M83 1385 aa20.26■□□□□ 0.83
SIK3-205ENST00000446921 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
SIK3-205ENST00000446921 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
SIK3-205ENST00000446921 ZFP91Q96JP5 570 aaPredicted RBP20.23■□□□□ 0.83
SIK3-205ENST00000446921 CUX2O14529 1486 aa20.22■□□□□ 0.83
SIK3-205ENST00000446921 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
SIK3-205ENST00000446921 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
SIK3-205ENST00000446921 KTN1Q86UP2 1357 aaKnown RBP20.22■□□□□ 0.83
SIK3-205ENST00000446921 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
SIK3-205ENST00000446921 FTSJ3Q8IY81 847 aaKnown RBP20.2■□□□□ 0.82
SIK3-205ENST00000446921 MCM4P33991 863 aa20.2■□□□□ 0.82
SIK3-205ENST00000446921 ERBB4Q15303 1308 aa20.2■□□□□ 0.82
SIK3-205ENST00000446921 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
SIK3-205ENST00000446921 CENPJQ9HC77 1338 aaPredicted RBP20.19■□□□□ 0.82
SIK3-205ENST00000446921 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
SIK3-205ENST00000446921 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
SIK3-205ENST00000446921 UQCRHLA0A096LP55 91 aa20.17■□□□□ 0.82
SIK3-205ENST00000446921 UQCRHP07919 91 aa20.17■□□□□ 0.82
SIK3-205ENST00000446921 NCAPD3P42695 1498 aa20.17■□□□□ 0.82
SIK3-205ENST00000446921 AEBP1Q8IUX7 1158 aa20.17■□□□□ 0.82
SIK3-205ENST00000446921 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
SIK3-205ENST00000446921 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
SIK3-205ENST00000446921 SMAP1Q8IYB5 467 aaPredicted RBP20.16■□□□□ 0.82
SIK3-205ENST00000446921 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
SIK3-205ENST00000446921 SMARCA2P51531 1590 aa20.14■□□□□ 0.82
SIK3-205ENST00000446921 APPP05067 770 aa20.14■□□□□ 0.82
SIK3-205ENST00000446921 FOXD1Q16676 465 aa20.14■□□□□ 0.82
SIK3-205ENST00000446921 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.82
SIK3-205ENST00000446921 PPP4R3BQ5MIZ7 849 aa20.14■□□□□ 0.81
SIK3-205ENST00000446921 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.13■□□□□ 0.81
SIK3-205ENST00000446921 RSPH4AQ5TD94 716 aa20.12■□□□□ 0.81
SIK3-205ENST00000446921 CBX1P83916 185 aa20.09■□□□□ 0.81
SIK3-205ENST00000446921 ZSCAN30Q86W11 494 aa20.09■□□□□ 0.81
SIK3-205ENST00000446921 FSD2A1L4K1 749 aa20.08■□□□□ 0.81
SIK3-205ENST00000446921 CGNQ9P2M7 1197 aaKnown RBP20.08■□□□□ 0.8
SIK3-205ENST00000446921 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.8
SIK3-205ENST00000446921 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
SIK3-205ENST00000446921 MTERF4Q7Z6M4 381 aaKnown RBP20.07■□□□□ 0.8
SIK3-205ENST00000446921 PEG3Q9GZU2 1588 aa20.07■□□□□ 0.8
SIK3-205ENST00000446921 RIPK4P57078 832 aa20.06■□□□□ 0.8
SIK3-205ENST00000446921 ZNF830Q96NB3 372 aaPredicted RBP20.06■□□□□ 0.8
SIK3-205ENST00000446921 XPCQ01831 940 aaPredicted RBP20.06■□□□□ 0.8
SIK3-205ENST00000446921 CHMP5Q9NZZ3 219 aa20.06■□□□□ 0.8
SIK3-205ENST00000446921 PDE3BQ13370 1112 aa20.05■□□□□ 0.8
SIK3-205ENST00000446921 DDX11L8A8MPP1 907 aa20.05■□□□□ 0.8
SIK3-205ENST00000446921 IRX3P78415 501 aaPredicted RBP20.05■□□□□ 0.8
SIK3-205ENST00000446921 NASPP49321 788 aaPredicted RBP20.05■□□□□ 0.8
SIK3-205ENST00000446921 OFD1O75665 1012 aa20.04■□□□□ 0.8
SIK3-205ENST00000446921 SECISBP2LQ93073 1101 aaKnown RBP20.04■□□□□ 0.8
SIK3-205ENST00000446921 PTMAP06454 111 aaKnown RBP20.03■□□□□ 0.8
SIK3-205ENST00000446921 SEC24BO95487 1268 aa20.02■□□□□ 0.8
SIK3-205ENST00000446921 ZNF771Q7L3S4 317 aaPredicted RBP20.02■□□□□ 0.8
SIK3-205ENST00000446921 IGSF3O75054 1194 aa20.01■□□□□ 0.79
SIK3-205ENST00000446921 TBC1D2Q9BYX2 928 aa20.01■□□□□ 0.79
SIK3-205ENST00000446921 FOXD4L1Q9NU39 408 aa20■□□□□ 0.79
SIK3-205ENST00000446921 HSCBQ8IWL3 235 aa20■□□□□ 0.79
SIK3-205ENST00000446921 CCDC173Q0VFZ6 552 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms