RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-238ENST00000446312 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
DDR1-238ENST00000446312 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
DDR1-238ENST00000446312 FMN1Q68DA7 1419 aa16.98■□□□□ 0.31
DDR1-238ENST00000446312 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
DDR1-238ENST00000446312 FYCO1Q9BQS8 1478 aa16.98■□□□□ 0.31
DDR1-238ENST00000446312 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
DDR1-238ENST00000446312 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
DDR1-238ENST00000446312 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
DDR1-238ENST00000446312 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
DDR1-238ENST00000446312 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.31
DDR1-238ENST00000446312 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
DDR1-238ENST00000446312 SNAPC4Q5SXM2 1469 aa16.95■□□□□ 0.3
DDR1-238ENST00000446312 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
DDR1-238ENST00000446312 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
DDR1-238ENST00000446312 FANCIQ9NVI1 1328 aa16.94■□□□□ 0.3
DDR1-238ENST00000446312 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
DDR1-238ENST00000446312 PLIN1O60240 522 aa16.93■□□□□ 0.3
DDR1-238ENST00000446312 PKNOX2Q96KN3 472 aa16.93■□□□□ 0.3
DDR1-238ENST00000446312 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
DDR1-238ENST00000446312 PKD2Q13563 968 aa16.91■□□□□ 0.3
DDR1-238ENST00000446312 CNTLNQ9NXG0 1405 aa16.9■□□□□ 0.3
DDR1-238ENST00000446312 SAMD9Q5K651 1589 aa16.9■□□□□ 0.3
DDR1-238ENST00000446312 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
DDR1-238ENST00000446312 KDM6BO15054 1643 aa16.89■□□□□ 0.29
DDR1-238ENST00000446312 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
DDR1-238ENST00000446312 EXOC6Q8TAG9 804 aa16.89■□□□□ 0.29
DDR1-238ENST00000446312 CDK13Q14004 1512 aaKnown RBP16.88■□□□□ 0.29
DDR1-238ENST00000446312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDR1-238ENST00000446312 ZBED9Q6R2W3 1325 aa16.88■□□□□ 0.29
DDR1-238ENST00000446312 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
DDR1-238ENST00000446312 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
DDR1-238ENST00000446312 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
DDR1-238ENST00000446312 CC2D1BQ5T0F9 858 aaKnown RBP16.87■□□□□ 0.29
DDR1-238ENST00000446312 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
DDR1-238ENST00000446312 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
DDR1-238ENST00000446312 CFDP1Q9UEE9 299 aaPredicted RBP16.85■□□□□ 0.29
DDR1-238ENST00000446312 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
DDR1-238ENST00000446312 CDCA7LQ96GN5 454 aa16.85■□□□□ 0.29
DDR1-238ENST00000446312 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
DDR1-238ENST00000446312 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
DDR1-238ENST00000446312 IL27Q8NEV9 243 aa16.83■□□□□ 0.28
DDR1-238ENST00000446312 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
DDR1-238ENST00000446312 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
DDR1-238ENST00000446312 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
DDR1-238ENST00000446312 PODXL2Q9NZ53 605 aa16.8■□□□□ 0.28
DDR1-238ENST00000446312 PBRM1Q86U86 1689 aa16.8■□□□□ 0.28
DDR1-238ENST00000446312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
DDR1-238ENST00000446312 KDM5BQ9UGL1 1544 aa16.79■□□□□ 0.28
DDR1-238ENST00000446312 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
DDR1-238ENST00000446312 USP47Q96K76 1375 aa16.78■□□□□ 0.28
DDR1-238ENST00000446312 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
DDR1-238ENST00000446312 NCOA1Q15788 1441 aa16.75■□□□□ 0.27
DDR1-238ENST00000446312 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
DDR1-238ENST00000446312 ANKRD30BQ9BXX2 1392 aa16.74■□□□□ 0.27
DDR1-238ENST00000446312 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
DDR1-238ENST00000446312 PNISRQ8TF01 805 aaKnown RBP16.74■□□□□ 0.27
DDR1-238ENST00000446312 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
DDR1-238ENST00000446312 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.27
DDR1-238ENST00000446312 NEFMP07197 916 aa16.73■□□□□ 0.27
DDR1-238ENST00000446312 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
DDR1-238ENST00000446312 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
DDR1-238ENST00000446312 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
DDR1-238ENST00000446312 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
DDR1-238ENST00000446312 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
DDR1-238ENST00000446312 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
DDR1-238ENST00000446312 EHBP1L1Q8N3D4 1523 aa16.7■□□□□ 0.26
DDR1-238ENST00000446312 NUP155O75694 1391 aa16.69■□□□□ 0.26
DDR1-238ENST00000446312 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
DDR1-238ENST00000446312 PRG4Q92954 1404 aaPredicted RBP16.69■□□□□ 0.26
DDR1-238ENST00000446312 ARXQ96QS3 562 aa16.68■□□□□ 0.26
DDR1-238ENST00000446312 RGS3P49796 1198 aa16.67■□□□□ 0.26
DDR1-238ENST00000446312 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
DDR1-238ENST00000446312 EPRSP07814 1512 aaKnown RBP16.67■□□□□ 0.26
DDR1-238ENST00000446312 PDE4AP27815 886 aa16.66■□□□□ 0.26
DDR1-238ENST00000446312 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
DDR1-238ENST00000446312 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
DDR1-238ENST00000446312 ABCC5O15440 1437 aa16.65■□□□□ 0.26
DDR1-238ENST00000446312 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
DDR1-238ENST00000446312 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
DDR1-238ENST00000446312 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
DDR1-238ENST00000446312 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
DDR1-238ENST00000446312 DAPK1P53355 1430 aa16.63■□□□□ 0.25
DDR1-238ENST00000446312 WDR62O43379 1518 aa16.63■□□□□ 0.25
DDR1-238ENST00000446312 TSPY4P0CV99 314 aa16.61■□□□□ 0.25
DDR1-238ENST00000446312 TSPY10P0CW01 314 aa16.61■□□□□ 0.25
DDR1-238ENST00000446312 CCDC146Q8IYE0 955 aa16.61■□□□□ 0.25
DDR1-238ENST00000446312 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
DDR1-238ENST00000446312 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
DDR1-238ENST00000446312 RPRD2Q5VT52 1461 aaKnown RBP16.6■□□□□ 0.25
DDR1-238ENST00000446312 DISP1Q96F81 1524 aa16.59■□□□□ 0.25
DDR1-238ENST00000446312 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
DDR1-238ENST00000446312 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.25
DDR1-238ENST00000446312 PANK3Q9H999 370 aa16.58■□□□□ 0.24
DDR1-238ENST00000446312 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
DDR1-238ENST00000446312 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
DDR1-238ENST00000446312 SPATA31E1Q6ZUB1 1445 aa16.56■□□□□ 0.24
DDR1-238ENST00000446312 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
DDR1-238ENST00000446312 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
DDR1-238ENST00000446312 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
DDR1-238ENST00000446312 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9751.9 ms