RNA–Protein interactions for RNA: ENST00000446015.6

AP1S3-208, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AP1S3, Length 499 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-208ENST00000446015 TMC2Q8TDI7 906 aa9.57□□□□□ -0.88
AP1S3-208ENST00000446015 PDE4AP27815 886 aa9.53□□□□□ -0.88
AP1S3-208ENST00000446015 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
AP1S3-208ENST00000446015 KIF3CO14782 793 aa9.5□□□□□ -0.89
AP1S3-208ENST00000446015 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
AP1S3-208ENST00000446015 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
AP1S3-208ENST00000446015 DOK7Q18PE1 504 aa9.48□□□□□ -0.89
AP1S3-208ENST00000446015 C2orf72A6NCS6 295 aa9.47□□□□□ -0.89
AP1S3-208ENST00000446015 FOXK1P85037 733 aa9.47□□□□□ -0.89
AP1S3-208ENST00000446015 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
AP1S3-208ENST00000446015 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
AP1S3-208ENST00000446015 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
AP1S3-208ENST00000446015 MFSD10Q14728 455 aa9.44□□□□□ -0.9
AP1S3-208ENST00000446015 NCKAP5LQ9HCH0 1330 aa9.42□□□□□ -0.9
AP1S3-208ENST00000446015 PPP1R15BQ5SWA1 713 aa9.42□□□□□ -0.9
AP1S3-208ENST00000446015 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
AP1S3-208ENST00000446015 SLC34A2O95436 690 aa9.41□□□□□ -0.9
AP1S3-208ENST00000446015 ZNF710Q8N1W2 664 aa9.41□□□□□ -0.9
AP1S3-208ENST00000446015 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
AP1S3-208ENST00000446015 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
AP1S3-208ENST00000446015 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
AP1S3-208ENST00000446015 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
AP1S3-208ENST00000446015 DSG2Q14126 1118 aa9.38□□□□□ -0.91
AP1S3-208ENST00000446015 TBC1D12O60347 775 aa9.37□□□□□ -0.91
AP1S3-208ENST00000446015 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
AP1S3-208ENST00000446015 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
AP1S3-208ENST00000446015 HOXB3P14651 431 aaPredicted RBP9.35□□□□□ -0.91
AP1S3-208ENST00000446015 P3H3Q8IVL6 736 aa9.34□□□□□ -0.91
AP1S3-208ENST00000446015 VSIG10Q8N0Z9 540 aa9.33□□□□□ -0.92
AP1S3-208ENST00000446015 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
AP1S3-208ENST00000446015 CAMK2BQ13554 666 aa9.32□□□□□ -0.92
AP1S3-208ENST00000446015 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
AP1S3-208ENST00000446015 E2F4Q16254 413 aa9.3□□□□□ -0.92
AP1S3-208ENST00000446015 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
AP1S3-208ENST00000446015 ST18O60284 1047 aa9.29□□□□□ -0.92
AP1S3-208ENST00000446015 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
AP1S3-208ENST00000446015 PCDHGA4Q9Y5G9 962 aa9.28□□□□□ -0.92
AP1S3-208ENST00000446015 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
AP1S3-208ENST00000446015 ARIH1Q9Y4X5 557 aaPredicted RBP9.27□□□□□ -0.93
AP1S3-208ENST00000446015 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
AP1S3-208ENST00000446015 MAP3K9P80192 1104 aa9.25□□□□□ -0.93
AP1S3-208ENST00000446015 EMP3P54852 163 aa9.24□□□□□ -0.93
AP1S3-208ENST00000446015 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
AP1S3-208ENST00000446015 ARSIQ5FYB1 569 aa9.22□□□□□ -0.93
AP1S3-208ENST00000446015 UPF1Q92900 1129 aaKnown RBP eCLIP9.22□□□□□ -0.93
AP1S3-208ENST00000446015 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
AP1S3-208ENST00000446015 EMILIN3Q9NT22 766 aa9.2□□□□□ -0.94
AP1S3-208ENST00000446015 SLC24A1O60721 1099 aa9.19□□□□□ -0.94
AP1S3-208ENST00000446015 LCE2DQ5TA82 110 aaPredicted RBP9.19□□□□□ -0.94
AP1S3-208ENST00000446015 NUDT7P0C024 238 aa9.18□□□□□ -0.94
AP1S3-208ENST00000446015 ERBB3P21860 1342 aa9.18□□□□□ -0.94
AP1S3-208ENST00000446015 PDIA6Q15084 440 aa9.18□□□□□ -0.94
AP1S3-208ENST00000446015 EVI5O60447 810 aa9.17□□□□□ -0.94
AP1S3-208ENST00000446015 DPYSL4O14531 572 aa9.16□□□□□ -0.94
AP1S3-208ENST00000446015 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
AP1S3-208ENST00000446015 ANO8Q9HCE9 1232 aaPredicted RBP9.16□□□□□ -0.94
AP1S3-208ENST00000446015 PCDH10Q9P2E7 1040 aa9.16□□□□□ -0.94
AP1S3-208ENST00000446015 KDM4FA0A1W2PPD8 638 aa9.15□□□□□ -0.94
AP1S3-208ENST00000446015 POTEMA6NI47 508 aa9.15□□□□□ -0.94
AP1S3-208ENST00000446015 POTEGQ6S5H5 508 aa9.15□□□□□ -0.94
AP1S3-208ENST00000446015 PPP4R3BQ5MIZ7 849 aa9.14□□□□□ -0.95
AP1S3-208ENST00000446015 MARVELD3Q96A59 401 aa9.14□□□□□ -0.95
AP1S3-208ENST00000446015 KDM2AQ9Y2K7 1162 aa9.14□□□□□ -0.95
AP1S3-208ENST00000446015 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
AP1S3-208ENST00000446015 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
AP1S3-208ENST00000446015 FAM205CA6NFA0 338 aa9.12□□□□□ -0.95
AP1S3-208ENST00000446015 PTGER2P43116 358 aa9.12□□□□□ -0.95
AP1S3-208ENST00000446015 KHSRPQ92945 711 aaKnown RBP eCLIP9.12□□□□□ -0.95
AP1S3-208ENST00000446015 HS3ST6Q96QI5 342 aa9.12□□□□□ -0.95
AP1S3-208ENST00000446015 LHX6Q9UPM6 363 aa9.12□□□□□ -0.95
AP1S3-208ENST00000446015 PBX2P40425 430 aa9.11□□□□□ -0.95
AP1S3-208ENST00000446015 VARS2Q5ST30 1063 aaKnown RBP9.11□□□□□ -0.95
AP1S3-208ENST00000446015 FBXW7Q969H0 707 aa9.11□□□□□ -0.95
AP1S3-208ENST00000446015 PHF14O94880 888 aa9.1□□□□□ -0.95
AP1S3-208ENST00000446015 EPAS1Q99814 870 aa9.1□□□□□ -0.95
AP1S3-208ENST00000446015 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
AP1S3-208ENST00000446015 FOSBP53539 338 aa9.08□□□□□ -0.96
AP1S3-208ENST00000446015 ZNF454Q8N9F8 522 aa9.07□□□□□ -0.96
AP1S3-208ENST00000446015 SMYD5Q6GMV2 418 aa9.06□□□□□ -0.96
AP1S3-208ENST00000446015 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
AP1S3-208ENST00000446015 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
AP1S3-208ENST00000446015 TULP1O00294 542 aaPredicted RBP9.05□□□□□ -0.96
AP1S3-208ENST00000446015 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
AP1S3-208ENST00000446015 CDAN1Q8IWY9 1227 aa9.02□□□□□ -0.97
AP1S3-208ENST00000446015 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
AP1S3-208ENST00000446015 PTPREP23469 700 aa9.01□□□□□ -0.97
AP1S3-208ENST00000446015 NBR1Q14596 966 aa9.01□□□□□ -0.97
AP1S3-208ENST00000446015 PCDHGA10Q9Y5H3 936 aa9.01□□□□□ -0.97
AP1S3-208ENST00000446015 DDX12PQ92771 950 aa9□□□□□ -0.97
AP1S3-208ENST00000446015 EN1Q05925 392 aaPredicted RBP8.99□□□□□ -0.97
AP1S3-208ENST00000446015 GRXCR2A6NFK2 248 aa8.98□□□□□ -0.97
AP1S3-208ENST00000446015 CERKQ8TCT0 537 aa8.98□□□□□ -0.97
AP1S3-208ENST00000446015 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
AP1S3-208ENST00000446015 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
AP1S3-208ENST00000446015 PPP1R3GB7ZBB8 358 aa8.96□□□□□ -0.98
AP1S3-208ENST00000446015 POTEBQ6S5H4 581 aa8.96□□□□□ -0.98
AP1S3-208ENST00000446015 TK2O00142 265 aa8.95□□□□□ -0.98
AP1S3-208ENST00000446015 SEMA3EO15041 775 aa8.95□□□□□ -0.98
AP1S3-208ENST00000446015 MAP3K7O43318 606 aa8.95□□□□□ -0.98
AP1S3-208ENST00000446015 ADAM33Q9BZ11 813 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms