RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ARID4BQ4LE39 1312 aaPredicted RBP37.91■■■■□ 3.66
C9orf3-207ENST00000445181 ZMYM4Q5VZL5 1548 aa37.89■■■■□ 3.66
C9orf3-207ENST00000445181 ARHGEF40Q8TER5 1519 aa37.89■■■■□ 3.66
C9orf3-207ENST00000445181 ARHGAP5Q13017 1502 aa37.88■■■■□ 3.65
C9orf3-207ENST00000445181 MTUS2Q5JR59 1369 aa37.88■■■■□ 3.65
C9orf3-207ENST00000445181 POGZQ7Z3K3 1410 aa37.87■■■■□ 3.65
C9orf3-207ENST00000445181 MAGI2Q86UL8 1455 aa37.84■■■■□ 3.65
C9orf3-207ENST00000445181 YEATS2Q9ULM3 1422 aa37.82■■■■□ 3.64
C9orf3-207ENST00000445181 ZFYVE16Q7Z3T8 1539 aa37.82■■■■□ 3.64
C9orf3-207ENST00000445181 ADAMTSL3P82987 1691 aa37.79■■■■□ 3.64
C9orf3-207ENST00000445181 CDC42BPBQ9Y5S2 1711 aa37.77■■■■□ 3.64
C9orf3-207ENST00000445181 BCORL1Q5H9F3 1711 aa37.76■■■■□ 3.64
C9orf3-207ENST00000445181 EHBP1L1Q8N3D4 1523 aa37.76■■■■□ 3.63
C9orf3-207ENST00000445181 TIAM1Q13009 1591 aa37.76■■■■□ 3.63
C9orf3-207ENST00000445181 PREX2Q70Z35 1606 aa37.73■■■■□ 3.63
C9orf3-207ENST00000445181 AFAP1Q8N556 730 aa37.73■■■■□ 3.63
C9orf3-207ENST00000445181 ZNF518AQ6AHZ1 1483 aa37.71■■■■□ 3.63
C9orf3-207ENST00000445181 PTPRMP28827 1452 aa37.7■■■■□ 3.63
C9orf3-207ENST00000445181 APLP2Q06481 763 aa37.69■■■■□ 3.62
C9orf3-207ENST00000445181 MADDQ8WXG6 1647 aa37.65■■■■□ 3.62
C9orf3-207ENST00000445181 ATP10AO60312 1499 aa37.65■■■■□ 3.62
C9orf3-207ENST00000445181 CDC42BPAQ5VT25 1732 aa37.65■■■■□ 3.62
C9orf3-207ENST00000445181 CCNB3Q8WWL7 1395 aa37.65■■■■□ 3.62
C9orf3-207ENST00000445181 MYT1LQ9UL68 1186 aa37.64■■■■□ 3.62
C9orf3-207ENST00000445181 HECW2Q9P2P5 1572 aa37.63■■■■□ 3.62
C9orf3-207ENST00000445181 MAP3K1Q13233 1512 aa37.63■■■■□ 3.61
C9orf3-207ENST00000445181 SIGLEC1Q9BZZ2 1709 aa37.62■■■■□ 3.61
C9orf3-207ENST00000445181 KDM5CP41229 1560 aa37.62■■■■□ 3.61
C9orf3-207ENST00000445181 GPATCH8Q9UKJ3 1502 aaKnown RBP37.61■■■■□ 3.61
C9orf3-207ENST00000445181 ZNF777Q9ULD5 760 aaPredicted RBP37.61■■■■□ 3.61
C9orf3-207ENST00000445181 ABCC1P33527 1531 aa37.61■■■■□ 3.61
C9orf3-207ENST00000445181 ARHGEF12Q9NZN5 1544 aa37.61■■■■□ 3.61
C9orf3-207ENST00000445181 LRRC9Q6ZRR7 1453 aa37.6■■■■□ 3.61
C9orf3-207ENST00000445181 MLECQ14165 292 aa37.59■■■■□ 3.61
C9orf3-207ENST00000445181 C9orf84Q5VXU9 1444 aa37.59■■■■□ 3.61
C9orf3-207ENST00000445181 TRAPPC8Q9Y2L5 1435 aa37.59■■■■□ 3.61
C9orf3-207ENST00000445181 SUPT6HQ7KZ85 1726 aaKnown RBP37.58■■■■□ 3.61
C9orf3-207ENST00000445181 CFDP1Q9UEE9 299 aaPredicted RBP37.55■■■■□ 3.6
C9orf3-207ENST00000445181 KANK4Q5T7N3 995 aaPredicted RBP37.54■■■■□ 3.6
C9orf3-207ENST00000445181 NCOA2Q15596 1464 aa37.53■■■■□ 3.6
C9orf3-207ENST00000445181 RIMS1Q86UR5 1692 aaKnown RBP37.53■■■■□ 3.6
C9orf3-207ENST00000445181 ITSN2Q9NZM3 1697 aa37.53■■■■□ 3.6
C9orf3-207ENST00000445181 MLH3Q9UHC1 1453 aa37.52■■■■□ 3.6
C9orf3-207ENST00000445181 SAMD9LQ8IVG5 1584 aa37.49■■■■□ 3.59
C9orf3-207ENST00000445181 HNRNPMP52272 730 aaKnown RBP eCLIP37.46■■■■□ 3.596e-7■■■□□ 18.3
C9orf3-207ENST00000445181 DIP2CQ9Y2E4 1556 aa37.46■■■■□ 3.59
C9orf3-207ENST00000445181 PLPPR3Q6T4P5 718 aa37.44■■■■□ 3.58
C9orf3-207ENST00000445181 SYCP2Q9BX26 1530 aa37.42■■■■□ 3.58
C9orf3-207ENST00000445181 ABCA6Q8N139 1617 aa37.42■■■■□ 3.58
C9orf3-207ENST00000445181 KIAA1107Q9UPP5 1409 aa37.4■■■■□ 3.58
C9orf3-207ENST00000445181 PLEKHH2Q8IVE3 1493 aa37.39■■■■□ 3.58
C9orf3-207ENST00000445181 REREQ9P2R6 1566 aa37.38■■■■□ 3.57
C9orf3-207ENST00000445181 FER1L4A9Z1Z3 1794 aa37.37■■■■□ 3.57
C9orf3-207ENST00000445181 KIDINS220Q9ULH0 1771 aa37.36■■■■□ 3.57
C9orf3-207ENST00000445181 SPAG9O60271 1321 aaKnown RBP37.36■■■■□ 3.57
C9orf3-207ENST00000445181 ZNF644Q9H582 1327 aaPredicted RBP37.33■■■■□ 3.57
C9orf3-207ENST00000445181 AGLP35573 1532 aa37.28■■■■□ 3.56
C9orf3-207ENST00000445181 LMTK3Q96Q04 1460 aa37.26■■■■□ 3.55
C9orf3-207ENST00000445181 MYOM3Q5VTT5 1437 aa37.24■■■■□ 3.55
C9orf3-207ENST00000445181 CEBPAP49715 358 aaPredicted RBP37.23■■■■□ 3.55
C9orf3-207ENST00000445181 ATP7AQ04656 1500 aa37.22■■■■□ 3.55
C9orf3-207ENST00000445181 CAMSAP2Q08AD1 1489 aa37.22■■■■□ 3.55
C9orf3-207ENST00000445181 MBD5Q9P267 1494 aa37.19■■■■□ 3.54
C9orf3-207ENST00000445181 ESF1Q9H501 851 aaKnown RBP37.18■■■■□ 3.54
C9orf3-207ENST00000445181 INO80Q9ULG1 1556 aaPredicted RBP37.17■■■■□ 3.54
C9orf3-207ENST00000445181 MIA2Q96PC5 1412 aa37.16■■■■□ 3.54
C9orf3-207ENST00000445181 HSPA2P54652 639 aa37.14■■■■□ 3.54
C9orf3-207ENST00000445181 A2MP01023 1474 aa37.11■■■■□ 3.53
C9orf3-207ENST00000445181 CCDC141Q6ZP82 1450 aa37.08■■■■□ 3.53
C9orf3-207ENST00000445181 RSPH4AQ5TD94 716 aa37.08■■■■□ 3.53
C9orf3-207ENST00000445181 RTEL1-TNFRSF6BF6WH68 1400 aa37.05■■■■□ 3.52
C9orf3-207ENST00000445181 PLXNC1O60486 1568 aa37.04■■■■□ 3.52
C9orf3-207ENST00000445181 CNTLNQ9NXG0 1405 aa37.04■■■■□ 3.52
C9orf3-207ENST00000445181 PPARGC1BQ86YN6 1023 aaKnown RBP37.04■■■■□ 3.52
C9orf3-207ENST00000445181 FGD6Q6ZV73 1430 aa37.02■■■■□ 3.52
C9orf3-207ENST00000445181 ARHGEF5Q12774 1597 aa37.02■■■■□ 3.52
C9orf3-207ENST00000445181 PTPN23Q9H3S7 1636 aa37.01■■■■□ 3.52
C9orf3-207ENST00000445181 C3P01024 1663 aa37.01■■■■□ 3.52
C9orf3-207ENST00000445181 ADGBQ8N7X0 1667 aa37■■■■□ 3.51
C9orf3-207ENST00000445181 PREX1Q8TCU6 1659 aa36.99■■■■□ 3.51
C9orf3-207ENST00000445181 TSPY4P0CV99 314 aa36.99■■■■□ 3.51
C9orf3-207ENST00000445181 TSPY10P0CW01 314 aa36.99■■■■□ 3.51
C9orf3-207ENST00000445181 GGT6Q6P531 493 aa36.97■■■■□ 3.51
C9orf3-207ENST00000445181 ILDR1Q86SU0 546 aaPredicted RBP36.94■■■■□ 3.5
C9orf3-207ENST00000445181 UHRF1BP1Q6BDS2 1440 aa36.93■■■■□ 3.5
C9orf3-207ENST00000445181 DHX29Q7Z478 1369 aaKnown RBP36.93■■■■□ 3.5
C9orf3-207ENST00000445181 SETD1BQ9UPS6 1966 aaKnown RBP36.93■■■■□ 3.5
C9orf3-207ENST00000445181 ZMYM3Q14202 1370 aa36.91■■■■□ 3.5
C9orf3-207ENST00000445181 TCOF1Q13428 1488 aaKnown RBP36.9■■■■□ 3.5
C9orf3-207ENST00000445181 PPP6R1Q9UPN7 881 aa36.88■■■■□ 3.49
C9orf3-207ENST00000445181 MROH2AA6NES4 1674 aa36.87■■■■□ 3.49
C9orf3-207ENST00000445181 FAM50AQ14320 339 aaKnown RBP36.86■■■■□ 3.49
C9orf3-207ENST00000445181 CLTCQ00610 1675 aaKnown RBP36.84■■■■□ 3.49
C9orf3-207ENST00000445181 KIF3BO15066 747 aa36.84■■■■□ 3.49
C9orf3-207ENST00000445181 NPATQ14207 1427 aa36.81■■■■□ 3.48
C9orf3-207ENST00000445181 MAST1Q9Y2H9 1570 aa36.81■■■■□ 3.48
C9orf3-207ENST00000445181 ABCC5O15440 1437 aa36.8■■■■□ 3.48
C9orf3-207ENST00000445181 DNMT1P26358 1616 aaKnown RBP36.78■■■■□ 3.48
C9orf3-207ENST00000445181 DAPK1P53355 1430 aa36.78■■■■□ 3.48
C9orf3-207ENST00000445181 CROCC2H7BZ55 1655 aa36.76■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms