RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 ANKRD30BQ9BXX2 1392 aa30.19■■■□□ 2.42
SKIDA1-201ENST00000444772 ABCC5O15440 1437 aa30.19■■■□□ 2.42
SKIDA1-201ENST00000444772 CNTLNQ9NXG0 1405 aa30.18■■■□□ 2.42
SKIDA1-201ENST00000444772 L3MBTL2Q969R5 705 aa30.18■■■□□ 2.42
SKIDA1-201ENST00000444772 RAPGEF6Q8TEU7 1601 aa30.18■■■□□ 2.42
SKIDA1-201ENST00000444772 NUP153P49790 1475 aaKnown RBP30.18■■■□□ 2.42
SKIDA1-201ENST00000444772 NCOA1Q15788 1441 aa30.14■■■□□ 2.42
SKIDA1-201ENST00000444772 ZNF608Q9ULD9 1512 aaPredicted RBP30.13■■■□□ 2.41
SKIDA1-201ENST00000444772 GRIN2AQ12879 1464 aa30.11■■■□□ 2.41
SKIDA1-201ENST00000444772 TEX14Q8IWB6 1497 aa30.1■■■□□ 2.41
SKIDA1-201ENST00000444772 HNRNPUQ00839 825 aaKnown RBP eCLIP30.09■■■□□ 2.41
SKIDA1-201ENST00000444772 CCDC7Q96M83 1385 aa30.08■■■□□ 2.41
SKIDA1-201ENST00000444772 ARID3CA6NKF2 412 aa30.07■■■□□ 2.4
SKIDA1-201ENST00000444772 TROQ12816 1431 aaPredicted RBP30.05■■■□□ 2.4
SKIDA1-201ENST00000444772 ITSN2Q9NZM3 1697 aa30.04■■■□□ 2.4
SKIDA1-201ENST00000444772 FOXD1Q16676 465 aa30.02■■■□□ 2.4
SKIDA1-201ENST00000444772 SLC4A1APQ9BWU0 796 aaKnown RBP30.02■■■□□ 2.4
SKIDA1-201ENST00000444772 POLR1AO95602 1720 aaPredicted RBP30.02■■■□□ 2.4
SKIDA1-201ENST00000444772 EIF4G3O43432 1585 aaKnown RBP30■■■□□ 2.39
SKIDA1-201ENST00000444772 SPATA31E1Q6ZUB1 1445 aa30■■■□□ 2.39
SKIDA1-201ENST00000444772 ZNF644Q9H582 1327 aaPredicted RBP29.99■■■□□ 2.39
SKIDA1-201ENST00000444772 ADGBQ8N7X0 1667 aa29.99■■■□□ 2.39
SKIDA1-201ENST00000444772 ERICH6BQ5W0A0 696 aa29.99■■■□□ 2.39
SKIDA1-201ENST00000444772 CAMSAP2Q08AD1 1489 aa29.98■■■□□ 2.39
SKIDA1-201ENST00000444772 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
SKIDA1-201ENST00000444772 ADCY10Q96PN6 1610 aa29.98■■■□□ 2.39
SKIDA1-201ENST00000444772 PRKRIP1Q9H875 184 aaPredicted RBP29.98■■■□□ 2.39
SKIDA1-201ENST00000444772 NBPF8Q3BBV2 869 aa29.97■■■□□ 2.39
SKIDA1-201ENST00000444772 ADGRL2O95490 1459 aa29.97■■■□□ 2.39
SKIDA1-201ENST00000444772 ANP32EQ9BTT0 268 aa29.95■■■□□ 2.39
SKIDA1-201ENST00000444772 PZPP20742 1482 aa29.95■■■□□ 2.38
SKIDA1-201ENST00000444772 C11orf95C9JLR9 678 aaPredicted RBP29.94■■■□□ 2.38
SKIDA1-201ENST00000444772 CFDP1Q9UEE9 299 aaPredicted RBP29.93■■■□□ 2.38
SKIDA1-201ENST00000444772 PRG4Q92954 1404 aaPredicted RBP29.92■■■□□ 2.38
SKIDA1-201ENST00000444772 GPATCH8Q9UKJ3 1502 aaKnown RBP29.92■■■□□ 2.38
SKIDA1-201ENST00000444772 CROCC2H7BZ55 1655 aa29.9■■■□□ 2.38
SKIDA1-201ENST00000444772 RBM19Q9Y4C8 960 aaKnown RBP29.9■■■□□ 2.38
SKIDA1-201ENST00000444772 SYNJ2O15056 1496 aa29.88■■■□□ 2.37
SKIDA1-201ENST00000444772 KIAA1107Q9UPP5 1409 aa29.88■■■□□ 2.37
SKIDA1-201ENST00000444772 KIF7Q2M1P5 1343 aa29.88■■■□□ 2.37
SKIDA1-201ENST00000444772 MBD5Q9P267 1494 aa29.87■■■□□ 2.37
SKIDA1-201ENST00000444772 CARMIL2Q6F5E8 1435 aa29.87■■■□□ 2.37
SKIDA1-201ENST00000444772 ANKRD30AQ9BXX3 1397 aa29.85■■■□□ 2.37
SKIDA1-201ENST00000444772 CEP170Q5SW79 1584 aa29.85■■■□□ 2.37
SKIDA1-201ENST00000444772 PLB1Q6P1J6 1458 aa29.84■■■□□ 2.37
SKIDA1-201ENST00000444772 ZBED9Q6R2W3 1325 aa29.84■■■□□ 2.37
SKIDA1-201ENST00000444772 MRS2Q9HD23 443 aa29.83■■■□□ 2.37
SKIDA1-201ENST00000444772 CCDC184Q52MB2 194 aa29.81■■■□□ 2.36
SKIDA1-201ENST00000444772 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
SKIDA1-201ENST00000444772 KIF14Q15058 1648 aa29.81■■■□□ 2.36
SKIDA1-201ENST00000444772 ARID4BQ4LE39 1312 aaPredicted RBP29.79■■■□□ 2.36
SKIDA1-201ENST00000444772 SHANK2Q9UPX8 1470 aa29.78■■■□□ 2.36
SKIDA1-201ENST00000444772 NUP160Q12769 1436 aa29.78■■■□□ 2.36
SKIDA1-201ENST00000444772 ANKRD50Q9ULJ7 1429 aa29.75■■■□□ 2.35
SKIDA1-201ENST00000444772 FAM9BQ8IZU0 186 aa29.74■■■□□ 2.35
SKIDA1-201ENST00000444772 PPP4R2Q9NY27 417 aa29.73■■■□□ 2.35
SKIDA1-201ENST00000444772 USP47Q96K76 1375 aa29.71■■■□□ 2.35
SKIDA1-201ENST00000444772 PKD2Q13563 968 aa29.71■■■□□ 2.35
SKIDA1-201ENST00000444772 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
SKIDA1-201ENST00000444772 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
SKIDA1-201ENST00000444772 ZNF777Q9ULD5 760 aaPredicted RBP29.71■■■□□ 2.35
SKIDA1-201ENST00000444772 ABCA8O94911 1581 aa29.69■■■□□ 2.34
SKIDA1-201ENST00000444772 PLEKHD1A6NEE1 506 aa29.68■■■□□ 2.34
SKIDA1-201ENST00000444772 CDC42BPAQ5VT25 1732 aa29.68■■■□□ 2.34
SKIDA1-201ENST00000444772 ABCC10Q5T3U5 1492 aa29.68■■■□□ 2.34
SKIDA1-201ENST00000444772 KDM5DQ9BY66 1539 aa29.68■■■□□ 2.34
SKIDA1-201ENST00000444772 ARHGEF12Q9NZN5 1544 aa29.68■■■□□ 2.34
SKIDA1-201ENST00000444772 DHX29Q7Z478 1369 aaKnown RBP29.67■■■□□ 2.34
SKIDA1-201ENST00000444772 KDM5CP41229 1560 aa29.67■■■□□ 2.34
SKIDA1-201ENST00000444772 ROCK2O75116 1388 aaKnown RBP29.66■■■□□ 2.34
SKIDA1-201ENST00000444772 IRX6P78412 446 aaPredicted RBP29.65■■■□□ 2.34
SKIDA1-201ENST00000444772 RALGAPBQ86X10 1494 aa29.65■■■□□ 2.34
SKIDA1-201ENST00000444772 C9orf84Q5VXU9 1444 aa29.64■■■□□ 2.34
SKIDA1-201ENST00000444772 BCORL1Q5H9F3 1711 aa29.63■■■□□ 2.33
SKIDA1-201ENST00000444772 FANCIQ9NVI1 1328 aa29.61■■■□□ 2.33
SKIDA1-201ENST00000444772 NUP155O75694 1391 aa29.6■■■□□ 2.33
SKIDA1-201ENST00000444772 ATP10BO94823 1461 aa29.6■■■□□ 2.33
SKIDA1-201ENST00000444772 FBLN2P98095 1184 aa29.59■■■□□ 2.33
SKIDA1-201ENST00000444772 ARHGEF5Q12774 1597 aa29.58■■■□□ 2.33
SKIDA1-201ENST00000444772 TSPY4P0CV99 314 aa29.57■■■□□ 2.32
SKIDA1-201ENST00000444772 TSPY10P0CW01 314 aa29.57■■■□□ 2.32
SKIDA1-201ENST00000444772 SMG6Q86US8 1419 aaKnown RBP29.56■■■□□ 2.32
SKIDA1-201ENST00000444772 PTPRGP23470 1445 aa29.56■■■□□ 2.32
SKIDA1-201ENST00000444772 ZNF326Q5BKZ1 582 aaKnown RBP29.53■■■□□ 2.32
SKIDA1-201ENST00000444772 KTN1Q86UP2 1357 aaKnown RBP29.49■■■□□ 2.31
SKIDA1-201ENST00000444772 KIF15Q9NS87 1388 aa29.49■■■□□ 2.31
SKIDA1-201ENST00000444772 CARD11Q9BXL7 1154 aa29.48■■■□□ 2.31
SKIDA1-201ENST00000444772 RSPH4AQ5TD94 716 aa29.47■■■□□ 2.31
SKIDA1-201ENST00000444772 NUDCQ9Y266 331 aa29.44■■■□□ 2.3
SKIDA1-201ENST00000444772 CCDC141Q6ZP82 1450 aa29.43■■■□□ 2.3
SKIDA1-201ENST00000444772 POLR3GLQ9BT43 218 aa29.42■■■□□ 2.3
SKIDA1-201ENST00000444772 RNF123Q5XPI4 1314 aa29.41■■■□□ 2.3
SKIDA1-201ENST00000444772 PNISRQ8TF01 805 aaKnown RBP29.4■■■□□ 2.3
SKIDA1-201ENST00000444772 PREX2Q70Z35 1606 aa29.38■■■□□ 2.29
SKIDA1-201ENST00000444772 MSH5O43196 834 aa29.38■■■□□ 2.29
SKIDA1-201ENST00000444772 TMC1Q8TDI8 760 aa29.37■■■□□ 2.29
SKIDA1-201ENST00000444772 HNRNPMP52272 730 aaKnown RBP eCLIP29.37■■■□□ 2.29
SKIDA1-201ENST00000444772 B4GALNT3Q6L9W6 998 aa29.37■■■□□ 2.29
SKIDA1-201ENST00000444772 FAM135AQ9P2D6 1515 aa29.37■■■□□ 2.29
SKIDA1-201ENST00000444772 RALBP1Q15311 655 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms