RNA–Protein interactions for RNA: ENST00000444131.2

TMED4-202, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 4

Gene TMED4, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-202ENST00000444131 EFCAB2Q5VUJ9 269 aa30.58■■■□□ 2.49
TMED4-202ENST00000444131 CLIP1P30622 1438 aa30.57■■■□□ 2.48
TMED4-202ENST00000444131 TROQ12816 1431 aaPredicted RBP30.57■■■□□ 2.48
TMED4-202ENST00000444131 YEATS2Q9ULM3 1422 aa30.52■■■□□ 2.48
TMED4-202ENST00000444131 LRRIQ1Q96JM4 1722 aa30.5■■■□□ 2.47
TMED4-202ENST00000444131 ILDR1Q86SU0 546 aaPredicted RBP30.5■■■□□ 2.47
TMED4-202ENST00000444131 CCDC18Q5T9S5 1454 aa30.5■■■□□ 2.47
TMED4-202ENST00000444131 RIMS1Q86UR5 1692 aaKnown RBP30.49■■■□□ 2.47
TMED4-202ENST00000444131 CASKIN1Q8WXD9 1431 aa30.48■■■□□ 2.47
TMED4-202ENST00000444131 ARHGAP5Q13017 1502 aa30.46■■■□□ 2.47
TMED4-202ENST00000444131 ZNF518AQ6AHZ1 1483 aa30.44■■■□□ 2.46
TMED4-202ENST00000444131 PCF11O94913 1555 aaKnown RBP30.43■■■□□ 2.46
TMED4-202ENST00000444131 ATP10AO60312 1499 aa30.43■■■□□ 2.46
TMED4-202ENST00000444131 SIGLEC1Q9BZZ2 1709 aa30.41■■■□□ 2.46
TMED4-202ENST00000444131 C9orf84Q5VXU9 1444 aa30.39■■■□□ 2.46
TMED4-202ENST00000444131 FYCO1Q9BQS8 1478 aa30.38■■■□□ 2.45
TMED4-202ENST00000444131 KDM5CP41229 1560 aa30.37■■■□□ 2.45
TMED4-202ENST00000444131 LMTK3Q96Q04 1460 aa30.37■■■□□ 2.45
TMED4-202ENST00000444131 CDC42BPBQ9Y5S2 1711 aa30.36■■■□□ 2.45
TMED4-202ENST00000444131 PREX2Q70Z35 1606 aa30.36■■■□□ 2.45
TMED4-202ENST00000444131 FER1L4A9Z1Z3 1794 aa30.36■■■□□ 2.45
TMED4-202ENST00000444131 MLECQ14165 292 aa30.32■■■□□ 2.44
TMED4-202ENST00000444131 ARHGEF12Q9NZN5 1544 aa30.31■■■□□ 2.44
TMED4-202ENST00000444131 AFAP1Q8N556 730 aa30.3■■■□□ 2.44
TMED4-202ENST00000444131 MLH3Q9UHC1 1453 aa30.27■■■□□ 2.44
TMED4-202ENST00000444131 REREQ9P2R6 1566 aa30.26■■■□□ 2.43
TMED4-202ENST00000444131 MYT1LQ9UL68 1186 aa30.26■■■□□ 2.43
TMED4-202ENST00000444131 ABCC1P33527 1531 aa30.26■■■□□ 2.43
TMED4-202ENST00000444131 CDC42BPAQ5VT25 1732 aa30.24■■■□□ 2.43
TMED4-202ENST00000444131 DIP2CQ9Y2E4 1556 aa30.24■■■□□ 2.43
TMED4-202ENST00000444131 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
TMED4-202ENST00000444131 PLPPR3Q6T4P5 718 aa30.22■■■□□ 2.43
TMED4-202ENST00000444131 TRAPPC8Q9Y2L5 1435 aa30.18■■■□□ 2.42
TMED4-202ENST00000444131 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
TMED4-202ENST00000444131 FBXO41Q8TF61 875 aa30.15■■■□□ 2.42
TMED4-202ENST00000444131 AGLP35573 1532 aa30.15■■■□□ 2.42
TMED4-202ENST00000444131 HSPA2P54652 639 aa30.14■■■□□ 2.42
TMED4-202ENST00000444131 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
TMED4-202ENST00000444131 GPATCH8Q9UKJ3 1502 aaKnown RBP30.12■■■□□ 2.41
TMED4-202ENST00000444131 SETD1BQ9UPS6 1966 aaKnown RBP30.11■■■□□ 2.41
TMED4-202ENST00000444131 KIDINS220Q9ULH0 1771 aa30.1■■■□□ 2.41
TMED4-202ENST00000444131 SAMD9LQ8IVG5 1584 aa30.08■■■□□ 2.41
TMED4-202ENST00000444131 PLEKHH2Q8IVE3 1493 aa30.07■■■□□ 2.4
TMED4-202ENST00000444131 MTUS2Q5JR59 1369 aa30.07■■■□□ 2.4
TMED4-202ENST00000444131 ZNF777Q9ULD5 760 aaPredicted RBP30.07■■■□□ 2.4
TMED4-202ENST00000444131 ESF1Q9H501 851 aaKnown RBP30.06■■■□□ 2.4
TMED4-202ENST00000444131 KIAA1107Q9UPP5 1409 aa30.05■■■□□ 2.4
TMED4-202ENST00000444131 CCNB3Q8WWL7 1395 aa30.05■■■□□ 2.4
TMED4-202ENST00000444131 CEBPAP49715 358 aaPredicted RBP30.05■■■□□ 2.4
TMED4-202ENST00000444131 SYCP2Q9BX26 1530 aa30.05■■■□□ 2.4
TMED4-202ENST00000444131 CFDP1Q9UEE9 299 aaPredicted RBP30.04■■■□□ 2.4
TMED4-202ENST00000444131 SPAG9O60271 1321 aaKnown RBP30.01■■■□□ 2.4
TMED4-202ENST00000444131 UHRF1BP1Q6BDS2 1440 aa30.01■■■□□ 2.39
TMED4-202ENST00000444131 CNTLNQ9NXG0 1405 aa30.01■■■□□ 2.39
TMED4-202ENST00000444131 C3P01024 1663 aa29.98■■■□□ 2.39
TMED4-202ENST00000444131 HNRNPMP52272 730 aaKnown RBP eCLIP29.98■■■□□ 2.39
TMED4-202ENST00000444131 EHBP1L1Q8N3D4 1523 aa29.97■■■□□ 2.39
TMED4-202ENST00000444131 CEP162Q5TB80 1403 aa29.96■■■□□ 2.39
TMED4-202ENST00000444131 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
TMED4-202ENST00000444131 DMRT2Q9Y5R5 561 aa29.94■■■□□ 2.38
TMED4-202ENST00000444131 INO80Q9ULG1 1556 aaPredicted RBP29.93■■■□□ 2.38
TMED4-202ENST00000444131 TIAM1Q13009 1591 aa29.9■■■□□ 2.38
TMED4-202ENST00000444131 MROH2AA6NES4 1674 aa29.9■■■□□ 2.38
TMED4-202ENST00000444131 SUPT6HQ7KZ85 1726 aaKnown RBP29.88■■■□□ 2.37
TMED4-202ENST00000444131 A2MP01023 1474 aa29.87■■■□□ 2.37
TMED4-202ENST00000444131 PLXNC1O60486 1568 aa29.86■■■□□ 2.37
TMED4-202ENST00000444131 STRCQ7RTU9 1775 aa29.85■■■□□ 2.37
TMED4-202ENST00000444131 CERKQ8TCT0 537 aa29.84■■■□□ 2.37
TMED4-202ENST00000444131 NPATQ14207 1427 aa29.84■■■□□ 2.37
TMED4-202ENST00000444131 ADGBQ8N7X0 1667 aa29.83■■■□□ 2.37
TMED4-202ENST00000444131 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
TMED4-202ENST00000444131 RTEL1-TNFRSF6BF6WH68 1400 aa29.8■■■□□ 2.36
TMED4-202ENST00000444131 ZMYM3Q14202 1370 aa29.79■■■□□ 2.36
TMED4-202ENST00000444131 PPP6R1Q9UPN7 881 aa29.79■■■□□ 2.36
TMED4-202ENST00000444131 ZNF644Q9H582 1327 aaPredicted RBP29.78■■■□□ 2.36
TMED4-202ENST00000444131 PTPRTO14522 1441 aa29.77■■■□□ 2.36
TMED4-202ENST00000444131 NCOA2Q15596 1464 aa29.75■■■□□ 2.35
TMED4-202ENST00000444131 CLTCQ00610 1675 aaKnown RBP29.75■■■□□ 2.35
TMED4-202ENST00000444131 RSPH4AQ5TD94 716 aa29.74■■■□□ 2.35
TMED4-202ENST00000444131 GGT6Q6P531 493 aa29.72■■■□□ 2.35
TMED4-202ENST00000444131 CCDC141Q6ZP82 1450 aa29.7■■■□□ 2.35
TMED4-202ENST00000444131 DHX29Q7Z478 1369 aaKnown RBP29.69■■■□□ 2.34
TMED4-202ENST00000444131 NCOA1Q15788 1441 aa29.69■■■□□ 2.34
TMED4-202ENST00000444131 VPS8Q8N3P4 1428 aa29.69■■■□□ 2.34
TMED4-202ENST00000444131 CAMSAP2Q08AD1 1489 aa29.68■■■□□ 2.34
TMED4-202ENST00000444131 ZNF142P52746 1687 aaPredicted RBP29.64■■■□□ 2.34
TMED4-202ENST00000444131 CAMSAP1Q5T5Y3 1602 aa29.63■■■□□ 2.33
TMED4-202ENST00000444131 PTPRKQ15262 1439 aa29.63■■■□□ 2.33
TMED4-202ENST00000444131 FAM135AQ9P2D6 1515 aa29.62■■■□□ 2.33
TMED4-202ENST00000444131 ARHGEF5Q12774 1597 aa29.62■■■□□ 2.33
TMED4-202ENST00000444131 MYO3AQ8NEV4 1616 aa29.62■■■□□ 2.33
TMED4-202ENST00000444131 LRRC9Q6ZRR7 1453 aa29.61■■■□□ 2.33
TMED4-202ENST00000444131 MAP3K1Q13233 1512 aa29.6■■■□□ 2.33
TMED4-202ENST00000444131 LOC105371045A0A1W2PR82 267 aa29.58■■■□□ 2.33
TMED4-202ENST00000444131 CEP170BQ9Y4F5 1589 aaPredicted RBP29.58■■■□□ 2.33
TMED4-202ENST00000444131 PLA2R1Q13018 1463 aa29.57■■■□□ 2.32
TMED4-202ENST00000444131 TSPY4P0CV99 314 aa29.57■■■□□ 2.32
TMED4-202ENST00000444131 TSPY10P0CW01 314 aa29.57■■■□□ 2.32
TMED4-202ENST00000444131 KIF3BO15066 747 aa29.55■■■□□ 2.32
TMED4-202ENST00000444131 PKD2Q13563 968 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms