RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 LMTK3Q96Q04 1460 aa13.87□□□□□ -0.19
TOP3B-209ENST00000442653 FMN1Q68DA7 1419 aa13.86□□□□□ -0.19
TOP3B-209ENST00000442653 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
TOP3B-209ENST00000442653 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
TOP3B-209ENST00000442653 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
TOP3B-209ENST00000442653 KIF14Q15058 1648 aa13.84□□□□□ -0.19
TOP3B-209ENST00000442653 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
TOP3B-209ENST00000442653 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
TOP3B-209ENST00000442653 MYO5CQ9NQX4 1742 aa13.82□□□□□ -0.2
TOP3B-209ENST00000442653 LRRIQ1Q96JM4 1722 aa13.81□□□□□ -0.2
TOP3B-209ENST00000442653 TROQ12816 1431 aaPredicted RBP13.8□□□□□ -0.2
TOP3B-209ENST00000442653 HSPA2P54652 639 aa13.79□□□□□ -0.2
TOP3B-209ENST00000442653 MLECQ14165 292 aa13.79□□□□□ -0.2
TOP3B-209ENST00000442653 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
TOP3B-209ENST00000442653 CDK11AQ9UQ88 783 aaPredicted RBP13.78□□□□□ -0.2
TOP3B-209ENST00000442653 FER1L4A9Z1Z3 1794 aa13.78□□□□□ -0.2
TOP3B-209ENST00000442653 ATP10AO60312 1499 aa13.77□□□□□ -0.21
TOP3B-209ENST00000442653 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
TOP3B-209ENST00000442653 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
TOP3B-209ENST00000442653 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
TOP3B-209ENST00000442653 C9orf84Q5VXU9 1444 aa13.76□□□□□ -0.21
TOP3B-209ENST00000442653 KDM5CP41229 1560 aa13.75□□□□□ -0.21
TOP3B-209ENST00000442653 ZNF518AQ6AHZ1 1483 aa13.75□□□□□ -0.21
TOP3B-209ENST00000442653 AFAP1Q8N556 730 aa13.75□□□□□ -0.21
TOP3B-209ENST00000442653 CLIP1P30622 1438 aa13.74□□□□□ -0.21
TOP3B-209ENST00000442653 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
TOP3B-209ENST00000442653 CASKIN1Q8WXD9 1431 aa13.73□□□□□ -0.21
TOP3B-209ENST00000442653 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.21
TOP3B-209ENST00000442653 PREX2Q70Z35 1606 aa13.71□□□□□ -0.22
TOP3B-209ENST00000442653 CEBPAP49715 358 aaPredicted RBP13.7□□□□□ -0.22
TOP3B-209ENST00000442653 ABCA6Q8N139 1617 aa13.7□□□□□ -0.22
TOP3B-209ENST00000442653 ABCC1P33527 1531 aa13.69□□□□□ -0.22
TOP3B-209ENST00000442653 CCDC18Q5T9S5 1454 aa13.69□□□□□ -0.22
TOP3B-209ENST00000442653 TRAPPC8Q9Y2L5 1435 aa13.69□□□□□ -0.22
TOP3B-209ENST00000442653 MLH3Q9UHC1 1453 aa13.68□□□□□ -0.22
TOP3B-209ENST00000442653 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
TOP3B-209ENST00000442653 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
TOP3B-209ENST00000442653 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
TOP3B-209ENST00000442653 FYCO1Q9BQS8 1478 aa13.67□□□□□ -0.22
TOP3B-209ENST00000442653 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
TOP3B-209ENST00000442653 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
TOP3B-209ENST00000442653 AGLP35573 1532 aa13.64□□□□□ -0.23
TOP3B-209ENST00000442653 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
TOP3B-209ENST00000442653 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
TOP3B-209ENST00000442653 STRCQ7RTU9 1775 aa13.61□□□□□ -0.23
TOP3B-209ENST00000442653 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
TOP3B-209ENST00000442653 C3P01024 1663 aa13.61□□□□□ -0.23
TOP3B-209ENST00000442653 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
TOP3B-209ENST00000442653 UHRF1BP1Q6BDS2 1440 aa13.61□□□□□ -0.23
TOP3B-209ENST00000442653 SYCP2Q9BX26 1530 aa13.6□□□□□ -0.23
TOP3B-209ENST00000442653 ZNF777Q9ULD5 760 aaPredicted RBP13.59□□□□□ -0.23
TOP3B-209ENST00000442653 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
TOP3B-209ENST00000442653 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
TOP3B-209ENST00000442653 HNRNPMP52272 730 aaKnown RBP eCLIP13.56□□□□□ -0.24
TOP3B-209ENST00000442653 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
TOP3B-209ENST00000442653 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
TOP3B-209ENST00000442653 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
TOP3B-209ENST00000442653 KIAA1107Q9UPP5 1409 aa13.55□□□□□ -0.24
TOP3B-209ENST00000442653 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
TOP3B-209ENST00000442653 INO80Q9ULG1 1556 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-209ENST00000442653 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
TOP3B-209ENST00000442653 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
TOP3B-209ENST00000442653 ADRA2BP18089 450 aa13.53□□□□□ -0.24
TOP3B-209ENST00000442653 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
TOP3B-209ENST00000442653 CCNB3Q8WWL7 1395 aa13.53□□□□□ -0.24
TOP3B-209ENST00000442653 SUPT6HQ7KZ85 1726 aaKnown RBP13.53□□□□□ -0.24
TOP3B-209ENST00000442653 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.25
TOP3B-209ENST00000442653 PLEKHH2Q8IVE3 1493 aa13.52□□□□□ -0.25
TOP3B-209ENST00000442653 MROH2AA6NES4 1674 aa13.52□□□□□ -0.25
TOP3B-209ENST00000442653 PTPRTO14522 1441 aa13.51□□□□□ -0.25
TOP3B-209ENST00000442653 TIAM1Q13009 1591 aa13.5□□□□□ -0.25
TOP3B-209ENST00000442653 A2MP01023 1474 aa13.5□□□□□ -0.25
TOP3B-209ENST00000442653 NPATQ14207 1427 aa13.5□□□□□ -0.25
TOP3B-209ENST00000442653 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
TOP3B-209ENST00000442653 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
TOP3B-209ENST00000442653 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
TOP3B-209ENST00000442653 CLTCQ00610 1675 aaKnown RBP13.48□□□□□ -0.25
TOP3B-209ENST00000442653 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
TOP3B-209ENST00000442653 MBD5Q9P267 1494 aa13.48□□□□□ -0.25
TOP3B-209ENST00000442653 CAMSAP1Q5T5Y3 1602 aa13.47□□□□□ -0.25
TOP3B-209ENST00000442653 LTBP4Q8N2S1 1624 aa13.47□□□□□ -0.25
TOP3B-209ENST00000442653 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
TOP3B-209ENST00000442653 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
TOP3B-209ENST00000442653 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
TOP3B-209ENST00000442653 GGT6Q6P531 493 aa13.45□□□□□ -0.26
TOP3B-209ENST00000442653 MYO3AQ8NEV4 1616 aa13.45□□□□□ -0.26
TOP3B-209ENST00000442653 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
TOP3B-209ENST00000442653 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
TOP3B-209ENST00000442653 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
TOP3B-209ENST00000442653 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
TOP3B-209ENST00000442653 NCOA2Q15596 1464 aa13.41□□□□□ -0.26
TOP3B-209ENST00000442653 CAMSAP2Q08AD1 1489 aa13.4□□□□□ -0.26
TOP3B-209ENST00000442653 PLA2R1Q13018 1463 aa13.4□□□□□ -0.26
TOP3B-209ENST00000442653 TCOF1Q13428 1488 aaKnown RBP13.4□□□□□ -0.26
TOP3B-209ENST00000442653 DHX29Q7Z478 1369 aaKnown RBP13.39□□□□□ -0.27
TOP3B-209ENST00000442653 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
TOP3B-209ENST00000442653 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
TOP3B-209ENST00000442653 IQSEC2Q5JU85 1478 aa13.38□□□□□ -0.27
TOP3B-209ENST00000442653 DISP3Q9P2K9 1392 aa13.36□□□□□ -0.27
TOP3B-209ENST00000442653 KIF3BO15066 747 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms