RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 DAPK1P53355 1430 aa22.67■■□□□ 1.22
NLE1-202ENST00000442241 L3MBTL2Q969R5 705 aa22.66■■□□□ 1.22
NLE1-202ENST00000442241 ABCC5O15440 1437 aa22.66■■□□□ 1.22
NLE1-202ENST00000442241 HSPA5P11021 654 aaKnown RBP22.66■■□□□ 1.22
NLE1-202ENST00000442241 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
NLE1-202ENST00000442241 BCANQ96GW7 911 aa22.65■■□□□ 1.22
NLE1-202ENST00000442241 CDK11AQ9UQ88 783 aaPredicted RBP22.64■■□□□ 1.22
NLE1-202ENST00000442241 CFDP1Q9UEE9 299 aaPredicted RBP22.64■■□□□ 1.21
NLE1-202ENST00000442241 SLC4A1APQ9BWU0 796 aaKnown RBP22.62■■□□□ 1.21
NLE1-202ENST00000442241 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
NLE1-202ENST00000442241 KIF14Q15058 1648 aa22.58■■□□□ 1.21
NLE1-202ENST00000442241 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
NLE1-202ENST00000442241 WASHC2AQ641Q2 1341 aa22.57■■□□□ 1.2
NLE1-202ENST00000442241 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
NLE1-202ENST00000442241 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
NLE1-202ENST00000442241 AKNAQ7Z591 1439 aa22.55■■□□□ 1.2
NLE1-202ENST00000442241 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
NLE1-202ENST00000442241 C11orf95C9JLR9 678 aaPredicted RBP22.54■■□□□ 1.2
NLE1-202ENST00000442241 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
NLE1-202ENST00000442241 TSHZ2Q9NRE2 1034 aa22.52■■□□□ 1.2
NLE1-202ENST00000442241 EIF4G2P78344 907 aaKnown RBP eCLIP22.51■■□□□ 1.19
NLE1-202ENST00000442241 CNGB1Q14028 1251 aaPredicted RBP22.51■■□□□ 1.19
NLE1-202ENST00000442241 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
NLE1-202ENST00000442241 FKBP8Q14318 412 aa22.5■■□□□ 1.19
NLE1-202ENST00000442241 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
NLE1-202ENST00000442241 ANKRD30BQ9BXX2 1392 aa22.5■■□□□ 1.19
NLE1-202ENST00000442241 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
NLE1-202ENST00000442241 CARMIL2Q6F5E8 1435 aa22.5■■□□□ 1.19
NLE1-202ENST00000442241 ROCK1Q13464 1354 aa22.49■■□□□ 1.19
NLE1-202ENST00000442241 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
NLE1-202ENST00000442241 NUP160Q12769 1436 aa22.46■■□□□ 1.19
NLE1-202ENST00000442241 ANP32EQ9BTT0 268 aa22.45■■□□□ 1.18
NLE1-202ENST00000442241 CCDC184Q52MB2 194 aa22.45■■□□□ 1.18
NLE1-202ENST00000442241 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
NLE1-202ENST00000442241 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.18
NLE1-202ENST00000442241 PKD2Q13563 968 aa22.42■■□□□ 1.18
NLE1-202ENST00000442241 POLR3GLQ9BT43 218 aa22.42■■□□□ 1.18
NLE1-202ENST00000442241 RPRD2Q5VT52 1461 aaKnown RBP22.41■■□□□ 1.18
NLE1-202ENST00000442241 ATP10BO94823 1461 aa22.41■■□□□ 1.18
NLE1-202ENST00000442241 PZPP20742 1482 aa22.41■■□□□ 1.18
NLE1-202ENST00000442241 HNRNPUQ00839 825 aaKnown RBP eCLIP22.4■■□□□ 1.18
NLE1-202ENST00000442241 TEX14Q8IWB6 1497 aa22.38■■□□□ 1.17
NLE1-202ENST00000442241 ITSN2Q9NZM3 1697 aa22.37■■□□□ 1.17
NLE1-202ENST00000442241 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
NLE1-202ENST00000442241 CCDC7Q96M83 1385 aa22.33■■□□□ 1.17
NLE1-202ENST00000442241 ABCA8O94911 1581 aa22.33■■□□□ 1.16
NLE1-202ENST00000442241 CDC42BPAQ5VT25 1732 aa22.32■■□□□ 1.16
NLE1-202ENST00000442241 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
NLE1-202ENST00000442241 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
NLE1-202ENST00000442241 ADCY10Q96PN6 1610 aa22.31■■□□□ 1.16
NLE1-202ENST00000442241 PTPRGP23470 1445 aa22.31■■□□□ 1.16
NLE1-202ENST00000442241 NUP155O75694 1391 aa22.31■■□□□ 1.16
NLE1-202ENST00000442241 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
NLE1-202ENST00000442241 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
NLE1-202ENST00000442241 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
NLE1-202ENST00000442241 ADGBQ8N7X0 1667 aa22.3■■□□□ 1.16
NLE1-202ENST00000442241 CNTLNQ9NXG0 1405 aa22.29■■□□□ 1.16
NLE1-202ENST00000442241 TSPY4P0CV99 314 aa22.29■■□□□ 1.16
NLE1-202ENST00000442241 TSPY10P0CW01 314 aa22.29■■□□□ 1.16
NLE1-202ENST00000442241 ABCC10Q5T3U5 1492 aa22.29■■□□□ 1.16
NLE1-202ENST00000442241 SENP3-EIF4A1A0A087X0R7 540 aa22.28■■□□□ 1.16
NLE1-202ENST00000442241 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
NLE1-202ENST00000442241 CROCC2H7BZ55 1655 aa22.28■■□□□ 1.16
NLE1-202ENST00000442241 NEFLP07196 543 aa22.28■■□□□ 1.16
NLE1-202ENST00000442241 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
NLE1-202ENST00000442241 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
NLE1-202ENST00000442241 ADGRL2O95490 1459 aa22.24■■□□□ 1.15
NLE1-202ENST00000442241 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
NLE1-202ENST00000442241 SPATA31E1Q6ZUB1 1445 aa22.21■■□□□ 1.15
NLE1-202ENST00000442241 KIF15Q9NS87 1388 aa22.21■■□□□ 1.15
NLE1-202ENST00000442241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
NLE1-202ENST00000442241 CHD1O14646 1710 aa22.2■■□□□ 1.15
NLE1-202ENST00000442241 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
NLE1-202ENST00000442241 USP47Q96K76 1375 aa22.18■■□□□ 1.14
NLE1-202ENST00000442241 BCL11AQ9H165 835 aa22.18■■□□□ 1.14
NLE1-202ENST00000442241 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
NLE1-202ENST00000442241 RGL3Q3MIN7 710 aa22.14■■□□□ 1.14
NLE1-202ENST00000442241 BCORL1Q5H9F3 1711 aa22.13■■□□□ 1.13
NLE1-202ENST00000442241 CARD11Q9BXL7 1154 aa22.13■■□□□ 1.13
NLE1-202ENST00000442241 MBD5Q9P267 1494 aa22.13■■□□□ 1.13
NLE1-202ENST00000442241 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
NLE1-202ENST00000442241 CDC42BPBQ9Y5S2 1711 aa22.12■■□□□ 1.13
NLE1-202ENST00000442241 SYCP2Q9BX26 1530 aa22.09■■□□□ 1.13
NLE1-202ENST00000442241 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
NLE1-202ENST00000442241 SHANK2Q9UPX8 1470 aa22.08■■□□□ 1.13
NLE1-202ENST00000442241 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.12
NLE1-202ENST00000442241 ST20-MTHFSA0A0A6YYL1 179 aa22.07■■□□□ 1.12
NLE1-202ENST00000442241 CCDC141Q6ZP82 1450 aa22.06■■□□□ 1.12
NLE1-202ENST00000442241 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
NLE1-202ENST00000442241 DHX29Q7Z478 1369 aaKnown RBP22.03■■□□□ 1.12
NLE1-202ENST00000442241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
NLE1-202ENST00000442241 KDM5CP41229 1560 aa22.02■■□□□ 1.12
NLE1-202ENST00000442241 FAM135AQ9P2D6 1515 aa22■■□□□ 1.11
NLE1-202ENST00000442241 ARHGEF5Q12774 1597 aa22■■□□□ 1.11
NLE1-202ENST00000442241 NBPF1Q3BBV0 1214 aa22■■□□□ 1.11
NLE1-202ENST00000442241 POLR1AO95602 1720 aaPredicted RBP22■■□□□ 1.11
NLE1-202ENST00000442241 RBM19Q9Y4C8 960 aaKnown RBP21.99■■□□□ 1.11
NLE1-202ENST00000442241 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
NLE1-202ENST00000442241 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
NLE1-202ENST00000442241 RALGAPBQ86X10 1494 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms