RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 EFCAB2Q5VUJ9 269 aa30.57■■■□□ 2.48
HMGB3P22-201ENST00000442010 POGZQ7Z3K3 1410 aa30.56■■■□□ 2.48
HMGB3P22-201ENST00000442010 PREX2Q70Z35 1606 aa30.55■■■□□ 2.48
HMGB3P22-201ENST00000442010 ARHGAP5Q13017 1502 aa30.54■■■□□ 2.48
HMGB3P22-201ENST00000442010 ADAMTSL3P82987 1691 aa30.54■■■□□ 2.48
HMGB3P22-201ENST00000442010 CDC42BPAQ5VT25 1732 aa30.53■■■□□ 2.48
HMGB3P22-201ENST00000442010 MAGI2Q86UL8 1455 aa30.51■■■□□ 2.48
HMGB3P22-201ENST00000442010 BCORL1Q5H9F3 1711 aa30.51■■■□□ 2.47
HMGB3P22-201ENST00000442010 ZFYVE16Q7Z3T8 1539 aa30.5■■■□□ 2.47
HMGB3P22-201ENST00000442010 YEATS2Q9ULM3 1422 aa30.48■■■□□ 2.47
HMGB3P22-201ENST00000442010 SIGLEC1Q9BZZ2 1709 aa30.47■■■□□ 2.47
HMGB3P22-201ENST00000442010 LOC105371045A0A1W2PR82 267 aa30.45■■■□□ 2.47
HMGB3P22-201ENST00000442010 KDM5CP41229 1560 aa30.44■■■□□ 2.46
HMGB3P22-201ENST00000442010 ZNF518AQ6AHZ1 1483 aa30.42■■■□□ 2.46
HMGB3P22-201ENST00000442010 ABCC1P33527 1531 aa30.41■■■□□ 2.46
HMGB3P22-201ENST00000442010 ITSN2Q9NZM3 1697 aa30.39■■■□□ 2.46
HMGB3P22-201ENST00000442010 ARHGEF12Q9NZN5 1544 aa30.38■■■□□ 2.45
HMGB3P22-201ENST00000442010 MADDQ8WXG6 1647 aa30.38■■■□□ 2.45
HMGB3P22-201ENST00000442010 GPATCH8Q9UKJ3 1502 aaKnown RBP30.37■■■□□ 2.45
HMGB3P22-201ENST00000442010 ARID4BQ4LE39 1312 aaPredicted RBP30.37■■■□□ 2.45
HMGB3P22-201ENST00000442010 AFAP1Q8N556 730 aa30.35■■■□□ 2.45
HMGB3P22-201ENST00000442010 PTPRMP28827 1452 aa30.35■■■□□ 2.45
HMGB3P22-201ENST00000442010 HECW2Q9P2P5 1572 aa30.33■■■□□ 2.45
HMGB3P22-201ENST00000442010 ATP10AO60312 1499 aa30.33■■■□□ 2.45
HMGB3P22-201ENST00000442010 MTUS2Q5JR59 1369 aa30.33■■■□□ 2.45
HMGB3P22-201ENST00000442010 SAMD9LQ8IVG5 1584 aa30.32■■■□□ 2.45
HMGB3P22-201ENST00000442010 EHBP1L1Q8N3D4 1523 aa30.32■■■□□ 2.44
HMGB3P22-201ENST00000442010 TRAPPC8Q9Y2L5 1435 aa30.31■■■□□ 2.44
HMGB3P22-201ENST00000442010 C9orf84Q5VXU9 1444 aa30.3■■■□□ 2.44
HMGB3P22-201ENST00000442010 MLH3Q9UHC1 1453 aa30.29■■■□□ 2.44
HMGB3P22-201ENST00000442010 RIMS1Q86UR5 1692 aaKnown RBP30.28■■■□□ 2.44
HMGB3P22-201ENST00000442010 DIP2CQ9Y2E4 1556 aa30.28■■■□□ 2.44
HMGB3P22-201ENST00000442010 ABCA6Q8N139 1617 aa30.25■■■□□ 2.43
HMGB3P22-201ENST00000442010 TIAM1Q13009 1591 aa30.25■■■□□ 2.43
HMGB3P22-201ENST00000442010 VPS8Q8N3P4 1428 aa30.25■■■□□ 2.43
HMGB3P22-201ENST00000442010 KIDINS220Q9ULH0 1771 aa30.24■■■□□ 2.43
HMGB3P22-201ENST00000442010 CCNB3Q8WWL7 1395 aa30.24■■■□□ 2.43
HMGB3P22-201ENST00000442010 REREQ9P2R6 1566 aa30.24■■■□□ 2.43
HMGB3P22-201ENST00000442010 SYCP2Q9BX26 1530 aa30.22■■■□□ 2.43
HMGB3P22-201ENST00000442010 FER1L4A9Z1Z3 1794 aa30.21■■■□□ 2.43
HMGB3P22-201ENST00000442010 ZNF777Q9ULD5 760 aaPredicted RBP30.2■■■□□ 2.43
HMGB3P22-201ENST00000442010 CFDP1Q9UEE9 299 aaPredicted RBP30.19■■■□□ 2.42
HMGB3P22-201ENST00000442010 KIAA1107Q9UPP5 1409 aa30.19■■■□□ 2.42
HMGB3P22-201ENST00000442010 PLEKHH2Q8IVE3 1493 aa30.17■■■□□ 2.42
HMGB3P22-201ENST00000442010 SUPT6HQ7KZ85 1726 aaKnown RBP30.16■■■□□ 2.42
HMGB3P22-201ENST00000442010 MLECQ14165 292 aa30.14■■■□□ 2.42
HMGB3P22-201ENST00000442010 HNRNPMP52272 730 aaKnown RBP eCLIP30.13■■■□□ 2.41
HMGB3P22-201ENST00000442010 MYT1LQ9UL68 1186 aa30.13■■■□□ 2.41
HMGB3P22-201ENST00000442010 NCOA2Q15596 1464 aa30.12■■■□□ 2.41
HMGB3P22-201ENST00000442010 AGLP35573 1532 aa30.12■■■□□ 2.41
HMGB3P22-201ENST00000442010 MAP3K1Q13233 1512 aa30.09■■■□□ 2.41
HMGB3P22-201ENST00000442010 INO80Q9ULG1 1556 aaPredicted RBP30.09■■■□□ 2.41
HMGB3P22-201ENST00000442010 LRRC9Q6ZRR7 1453 aa30.08■■■□□ 2.41
HMGB3P22-201ENST00000442010 ZNF644Q9H582 1327 aaPredicted RBP30.07■■■□□ 2.4
HMGB3P22-201ENST00000442010 MBD5Q9P267 1494 aa30.06■■■□□ 2.4
HMGB3P22-201ENST00000442010 ATP7AQ04656 1500 aa30.06■■■□□ 2.4
HMGB3P22-201ENST00000442010 SPAG9O60271 1321 aaKnown RBP30.05■■■□□ 2.4
HMGB3P22-201ENST00000442010 LMTK3Q96Q04 1460 aa30.03■■■□□ 2.4
HMGB3P22-201ENST00000442010 KANK4Q5T7N3 995 aaPredicted RBP29.98■■■□□ 2.39
HMGB3P22-201ENST00000442010 PLXNC1O60486 1568 aa29.98■■■□□ 2.39
HMGB3P22-201ENST00000442010 CAMSAP2Q08AD1 1489 aa29.97■■■□□ 2.39
HMGB3P22-201ENST00000442010 ADGBQ8N7X0 1667 aa29.95■■■□□ 2.38
HMGB3P22-201ENST00000442010 PLPPR3Q6T4P5 718 aa29.94■■■□□ 2.38
HMGB3P22-201ENST00000442010 SETD1BQ9UPS6 1966 aaKnown RBP29.92■■■□□ 2.38
HMGB3P22-201ENST00000442010 RTEL1-TNFRSF6BF6WH68 1400 aa29.92■■■□□ 2.38
HMGB3P22-201ENST00000442010 A2MP01023 1474 aa29.92■■■□□ 2.38
HMGB3P22-201ENST00000442010 C3P01024 1663 aa29.91■■■□□ 2.38
HMGB3P22-201ENST00000442010 CEBPAP49715 358 aaPredicted RBP29.9■■■□□ 2.38
HMGB3P22-201ENST00000442010 CCDC141Q6ZP82 1450 aa29.89■■■□□ 2.38
HMGB3P22-201ENST00000442010 ARHGEF5Q12774 1597 aa29.89■■■□□ 2.38
HMGB3P22-201ENST00000442010 PREX1Q8TCU6 1659 aa29.88■■■□□ 2.37
HMGB3P22-201ENST00000442010 RSPH4AQ5TD94 716 aa29.85■■■□□ 2.37
HMGB3P22-201ENST00000442010 MROH2AA6NES4 1674 aa29.84■■■□□ 2.37
HMGB3P22-201ENST00000442010 CNTLNQ9NXG0 1405 aa29.83■■■□□ 2.37
HMGB3P22-201ENST00000442010 MYOM3Q5VTT5 1437 aa29.82■■■□□ 2.36
HMGB3P22-201ENST00000442010 MIA2Q96PC5 1412 aa29.81■■■□□ 2.36
HMGB3P22-201ENST00000442010 HSPA2P54652 639 aa29.8■■■□□ 2.36
HMGB3P22-201ENST00000442010 ESF1Q9H501 851 aaKnown RBP29.78■■■□□ 2.36
HMGB3P22-201ENST00000442010 CLTCQ00610 1675 aaKnown RBP29.78■■■□□ 2.36
HMGB3P22-201ENST00000442010 DHX29Q7Z478 1369 aaKnown RBP29.77■■■□□ 2.36
HMGB3P22-201ENST00000442010 APLP2Q06481 763 aa29.75■■■□□ 2.35
HMGB3P22-201ENST00000442010 MAST1Q9Y2H9 1570 aa29.75■■■□□ 2.35
HMGB3P22-201ENST00000442010 ZMYM3Q14202 1370 aa29.71■■■□□ 2.35
HMGB3P22-201ENST00000442010 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
HMGB3P22-201ENST00000442010 GGT6Q6P531 493 aa29.7■■■□□ 2.35
HMGB3P22-201ENST00000442010 TSPY4P0CV99 314 aa29.69■■■□□ 2.34
HMGB3P22-201ENST00000442010 TSPY10P0CW01 314 aa29.69■■■□□ 2.34
HMGB3P22-201ENST00000442010 PPP6R1Q9UPN7 881 aa29.69■■■□□ 2.34
HMGB3P22-201ENST00000442010 PTPN23Q9H3S7 1636 aa29.67■■■□□ 2.34
HMGB3P22-201ENST00000442010 NPATQ14207 1427 aa29.67■■■□□ 2.34
HMGB3P22-201ENST00000442010 STRCQ7RTU9 1775 aa29.65■■■□□ 2.34
HMGB3P22-201ENST00000442010 CROCC2H7BZ55 1655 aa29.63■■■□□ 2.33
HMGB3P22-201ENST00000442010 KIF3BO15066 747 aa29.62■■■□□ 2.33
HMGB3P22-201ENST00000442010 FGD6Q6ZV73 1430 aa29.61■■■□□ 2.33
HMGB3P22-201ENST00000442010 TCOF1Q13428 1488 aaKnown RBP29.61■■■□□ 2.33
HMGB3P22-201ENST00000442010 PTPRKQ15262 1439 aa29.6■■■□□ 2.33
HMGB3P22-201ENST00000442010 FAM135AQ9P2D6 1515 aa29.6■■■□□ 2.33
HMGB3P22-201ENST00000442010 RNF17Q9BXT8 1623 aaKnown RBP29.57■■■□□ 2.32
HMGB3P22-201ENST00000442010 ABCC5O15440 1437 aa29.57■■■□□ 2.32
HMGB3P22-201ENST00000442010 DNMT1P26358 1616 aaKnown RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms