RNA–Protein interactions for RNA: ENST00000440513.7

BRF1-205, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-205ENST00000440513 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
BRF1-205ENST00000440513 RBM19Q9Y4C8 960 aaKnown RBP21.76■■□□□ 1.07
BRF1-205ENST00000440513 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
BRF1-205ENST00000440513 HNRNPUQ00839 825 aaKnown RBP eCLIP21.73■■□□□ 1.07
BRF1-205ENST00000440513 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
BRF1-205ENST00000440513 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
BRF1-205ENST00000440513 GCC2Q8IWJ2 1684 aa21.69■■□□□ 1.06
BRF1-205ENST00000440513 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
BRF1-205ENST00000440513 ABCA8O94911 1581 aa21.68■■□□□ 1.06
BRF1-205ENST00000440513 WASHC2AQ641Q2 1341 aa21.68■■□□□ 1.06
BRF1-205ENST00000440513 ZNF644Q9H582 1327 aaPredicted RBP21.68■■□□□ 1.06
BRF1-205ENST00000440513 KIF14Q15058 1648 aa21.68■■□□□ 1.06
BRF1-205ENST00000440513 TCOF1Q13428 1488 aaKnown RBP21.67■■□□□ 1.06
BRF1-205ENST00000440513 PTPRGP23470 1445 aa21.66■■□□□ 1.06
BRF1-205ENST00000440513 CDK11AQ9UQ88 783 aaPredicted RBP21.64■■□□□ 1.05
BRF1-205ENST00000440513 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.051e-6■■■■■ 36.9
BRF1-205ENST00000440513 TROQ12816 1431 aaPredicted RBP21.63■■□□□ 1.05
BRF1-205ENST00000440513 DENND4BO75064 1496 aaPredicted RBP21.63■■□□□ 1.05
BRF1-205ENST00000440513 ATP10BO94823 1461 aa21.63■■□□□ 1.05
BRF1-205ENST00000440513 SHROOM2Q13796 1616 aa21.63■■□□□ 1.05
BRF1-205ENST00000440513 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
BRF1-205ENST00000440513 KDM6BO15054 1643 aa21.61■■□□□ 1.05
BRF1-205ENST00000440513 IRX6P78412 446 aaPredicted RBP21.59■■□□□ 1.05
BRF1-205ENST00000440513 CNTLNQ9NXG0 1405 aa21.59■■□□□ 1.05
BRF1-205ENST00000440513 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.05
BRF1-205ENST00000440513 ZNF777Q9ULD5 760 aaPredicted RBP21.58■■□□□ 1.04
BRF1-205ENST00000440513 MIA2Q96PC5 1412 aa21.57■■□□□ 1.04
BRF1-205ENST00000440513 CLASP1Q7Z460 1538 aa21.56■■□□□ 1.04
BRF1-205ENST00000440513 L3MBTL2Q969R5 705 aa21.55■■□□□ 1.04
BRF1-205ENST00000440513 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
BRF1-205ENST00000440513 FOXD1Q16676 465 aa21.53■■□□□ 1.04
BRF1-205ENST00000440513 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
BRF1-205ENST00000440513 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
BRF1-205ENST00000440513 ADCY10Q96PN6 1610 aa21.52■■□□□ 1.03
BRF1-205ENST00000440513 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
BRF1-205ENST00000440513 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
BRF1-205ENST00000440513 DAPK1P53355 1430 aa21.5■■□□□ 1.03
BRF1-205ENST00000440513 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
BRF1-205ENST00000440513 CAMSAP2Q08AD1 1489 aa21.49■■□□□ 1.03
BRF1-205ENST00000440513 ABCC5O15440 1437 aa21.49■■□□□ 1.03
BRF1-205ENST00000440513 C11orf95C9JLR9 678 aaPredicted RBP21.48■■□□□ 1.03
BRF1-205ENST00000440513 PRKRIP1Q9H875 184 aaPredicted RBP21.48■■□□□ 1.03
BRF1-205ENST00000440513 ERICH6BQ5W0A0 696 aa21.47■■□□□ 1.03
BRF1-205ENST00000440513 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
BRF1-205ENST00000440513 FAM9BQ8IZU0 186 aa21.46■■□□□ 1.03
BRF1-205ENST00000440513 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
BRF1-205ENST00000440513 ITSN2Q9NZM3 1697 aa21.46■■□□□ 1.03
BRF1-205ENST00000440513 MRS2Q9HD23 443 aa21.45■■□□□ 1.02
BRF1-205ENST00000440513 ABCC10Q5T3U5 1492 aa21.45■■□□□ 1.02
BRF1-205ENST00000440513 RPRD2Q5VT52 1461 aaKnown RBP21.45■■□□□ 1.02
BRF1-205ENST00000440513 MSH5O43196 834 aa21.44■■□□□ 1.02
BRF1-205ENST00000440513 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
BRF1-205ENST00000440513 FANCIQ9NVI1 1328 aa21.43■■□□□ 1.02
BRF1-205ENST00000440513 PPP4R2Q9NY27 417 aa21.43■■□□□ 1.02
BRF1-205ENST00000440513 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
BRF1-205ENST00000440513 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
BRF1-205ENST00000440513 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
BRF1-205ENST00000440513 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
BRF1-205ENST00000440513 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
BRF1-205ENST00000440513 SLC4A1APQ9BWU0 796 aaKnown RBP21.38■■□□□ 1.01
BRF1-205ENST00000440513 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
BRF1-205ENST00000440513 POLR1AO95602 1720 aaPredicted RBP21.37■■□□□ 1.01
BRF1-205ENST00000440513 TTC37Q6PGP7 1564 aa21.36■■□□□ 1.01
BRF1-205ENST00000440513 SPATA31E1Q6ZUB1 1445 aa21.35■■□□□ 1.01
BRF1-205ENST00000440513 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
BRF1-205ENST00000440513 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.012e-6■■■■■ 28
BRF1-205ENST00000440513 ZCCHC11Q5TAX3 1644 aaKnown RBP21.34■■□□□ 1.01
BRF1-205ENST00000440513 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1
BRF1-205ENST00000440513 BCL11AQ9H165 835 aa21.32■■□□□ 1
BRF1-205ENST00000440513 CROCC2H7BZ55 1655 aa21.31■■□□□ 1
BRF1-205ENST00000440513 B4GALNT3Q6L9W6 998 aa21.31■■□□□ 1
BRF1-205ENST00000440513 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.31■■□□□ 12e-7■■■■■ 33.4
BRF1-205ENST00000440513 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
BRF1-205ENST00000440513 PREX2Q70Z35 1606 aa21.28■■□□□ 1
BRF1-205ENST00000440513 ADGBQ8N7X0 1667 aa21.27■■□□□ 1
BRF1-205ENST00000440513 PZPP20742 1482 aa21.25■□□□□ 0.99
BRF1-205ENST00000440513 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
BRF1-205ENST00000440513 ARHGAP5Q13017 1502 aa21.24■□□□□ 0.99
BRF1-205ENST00000440513 C9orf84Q5VXU9 1444 aa21.23■□□□□ 0.99
BRF1-205ENST00000440513 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
BRF1-205ENST00000440513 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
BRF1-205ENST00000440513 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
BRF1-205ENST00000440513 SYCP2Q9BX26 1530 aa21.21■□□□□ 0.99
BRF1-205ENST00000440513 MBD5Q9P267 1494 aa21.21■□□□□ 0.99
BRF1-205ENST00000440513 USP47Q96K76 1375 aa21.21■□□□□ 0.99
BRF1-205ENST00000440513 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
BRF1-205ENST00000440513 DHX29Q7Z478 1369 aaKnown RBP21.21■□□□□ 0.99
BRF1-205ENST00000440513 ADGRL2O95490 1459 aa21.2■□□□□ 0.98
BRF1-205ENST00000440513 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
BRF1-205ENST00000440513 ANKRD30AQ9BXX3 1397 aa21.2■□□□□ 0.98
BRF1-205ENST00000440513 MYO5CQ9NQX4 1742 aa21.19■□□□□ 0.98
BRF1-205ENST00000440513 KIAA1107Q9UPP5 1409 aa21.19■□□□□ 0.98
BRF1-205ENST00000440513 TSPY4P0CV99 314 aa21.17■□□□□ 0.98
BRF1-205ENST00000440513 TSPY10P0CW01 314 aa21.17■□□□□ 0.98
BRF1-205ENST00000440513 BCORL1Q5H9F3 1711 aa21.17■□□□□ 0.98
BRF1-205ENST00000440513 ANKRD50Q9ULJ7 1429 aa21.15■□□□□ 0.98
BRF1-205ENST00000440513 NUDCQ9Y266 331 aa21.15■□□□□ 0.98
BRF1-205ENST00000440513 PKD2Q13563 968 aa21.14■□□□□ 0.97
BRF1-205ENST00000440513 CCDC141Q6ZP82 1450 aa21.14■□□□□ 0.97
BRF1-205ENST00000440513 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms