RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 BCORL1Q5H9F3 1711 aa28.21■■■□□ 2.11
CCDC188-201ENST00000439765 VPS8Q8N3P4 1428 aa28.19■■■□□ 2.1
CCDC188-201ENST00000439765 HECW2Q9P2P5 1572 aa28.14■■■□□ 2.1
CCDC188-201ENST00000439765 MAGI2Q86UL8 1455 aa28.14■■■□□ 2.1
CCDC188-201ENST00000439765 CDC42BPBQ9Y5S2 1711 aa28.14■■■□□ 2.09
CCDC188-201ENST00000439765 POGZQ7Z3K3 1410 aa28.13■■■□□ 2.09
CCDC188-201ENST00000439765 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
CCDC188-201ENST00000439765 SCAPERQ9BY12 1400 aa28.11■■■□□ 2.09
CCDC188-201ENST00000439765 MADDQ8WXG6 1647 aa28.1■■■□□ 2.09
CCDC188-201ENST00000439765 PREX2Q70Z35 1606 aa28.09■■■□□ 2.09
CCDC188-201ENST00000439765 SIGLEC1Q9BZZ2 1709 aa28.09■■■□□ 2.09
CCDC188-201ENST00000439765 TIAM1Q13009 1591 aa28.08■■■□□ 2.09
CCDC188-201ENST00000439765 ARHGAP5Q13017 1502 aa28.08■■■□□ 2.09
CCDC188-201ENST00000439765 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
CCDC188-201ENST00000439765 CDC42BPAQ5VT25 1732 aa28.07■■■□□ 2.08
CCDC188-201ENST00000439765 PTPRMP28827 1452 aa28.06■■■□□ 2.08
CCDC188-201ENST00000439765 EHBP1L1Q8N3D4 1523 aa28.06■■■□□ 2.08
CCDC188-201ENST00000439765 YEATS2Q9ULM3 1422 aa28.06■■■□□ 2.08
CCDC188-201ENST00000439765 MTUS2Q5JR59 1369 aa28.05■■■□□ 2.08
CCDC188-201ENST00000439765 KDM5CP41229 1560 aa28.03■■■□□ 2.08
CCDC188-201ENST00000439765 RIMS1Q86UR5 1692 aaKnown RBP28.02■■■□□ 2.08
CCDC188-201ENST00000439765 ARID4BQ4LE39 1312 aaPredicted RBP28.01■■■□□ 2.08
CCDC188-201ENST00000439765 ZNF518AQ6AHZ1 1483 aa28.01■■■□□ 2.07
CCDC188-201ENST00000439765 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
CCDC188-201ENST00000439765 ABCC1P33527 1531 aa27.96■■■□□ 2.07
CCDC188-201ENST00000439765 SUPT6HQ7KZ85 1726 aaKnown RBP27.96■■■□□ 2.07
CCDC188-201ENST00000439765 FER1L4A9Z1Z3 1794 aa27.95■■■□□ 2.06
CCDC188-201ENST00000439765 ATP10AO60312 1499 aa27.94■■■□□ 2.06
CCDC188-201ENST00000439765 C9orf84Q5VXU9 1444 aa27.92■■■□□ 2.06
CCDC188-201ENST00000439765 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
CCDC188-201ENST00000439765 LRRC9Q6ZRR7 1453 aa27.89■■■□□ 2.06
CCDC188-201ENST00000439765 GPATCH8Q9UKJ3 1502 aaKnown RBP27.89■■■□□ 2.06
CCDC188-201ENST00000439765 DIP2CQ9Y2E4 1556 aa27.89■■■□□ 2.05
CCDC188-201ENST00000439765 REREQ9P2R6 1566 aa27.88■■■□□ 2.05
CCDC188-201ENST00000439765 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
CCDC188-201ENST00000439765 MLH3Q9UHC1 1453 aa27.86■■■□□ 2.05
CCDC188-201ENST00000439765 ABCA6Q8N139 1617 aa27.86■■■□□ 2.05
CCDC188-201ENST00000439765 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
CCDC188-201ENST00000439765 AFAP1Q8N556 730 aa27.86■■■□□ 2.05
CCDC188-201ENST00000439765 SAMD9LQ8IVG5 1584 aa27.86■■■□□ 2.05
CCDC188-201ENST00000439765 NCOA2Q15596 1464 aa27.86■■■□□ 2.05
CCDC188-201ENST00000439765 KIDINS220Q9ULH0 1771 aa27.83■■■□□ 2.05
CCDC188-201ENST00000439765 TRAPPC8Q9Y2L5 1435 aa27.83■■■□□ 2.05
CCDC188-201ENST00000439765 LMTK3Q96Q04 1460 aa27.79■■■□□ 2.04
CCDC188-201ENST00000439765 SYCP2Q9BX26 1530 aa27.79■■■□□ 2.04
CCDC188-201ENST00000439765 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
CCDC188-201ENST00000439765 APLP2Q06481 763 aa27.77■■■□□ 2.04
CCDC188-201ENST00000439765 ZNF777Q9ULD5 760 aaPredicted RBP27.76■■■□□ 2.04
CCDC188-201ENST00000439765 MLECQ14165 292 aa27.76■■■□□ 2.03
CCDC188-201ENST00000439765 AGLP35573 1532 aa27.75■■■□□ 2.03
CCDC188-201ENST00000439765 CFDP1Q9UEE9 299 aaPredicted RBP27.74■■■□□ 2.03
CCDC188-201ENST00000439765 PLEKHH2Q8IVE3 1493 aa27.72■■■□□ 2.03
CCDC188-201ENST00000439765 KIAA1107Q9UPP5 1409 aa27.71■■■□□ 2.03
CCDC188-201ENST00000439765 MYT1LQ9UL68 1186 aa27.7■■■□□ 2.03
CCDC188-201ENST00000439765 SETD1BQ9UPS6 1966 aaKnown RBP27.7■■■□□ 2.02
CCDC188-201ENST00000439765 INO80Q9ULG1 1556 aaPredicted RBP27.68■■■□□ 2.02
CCDC188-201ENST00000439765 PREX1Q8TCU6 1659 aa27.67■■■□□ 2.02
CCDC188-201ENST00000439765 CAMSAP2Q08AD1 1489 aa27.65■■■□□ 2.02
CCDC188-201ENST00000439765 ATP7AQ04656 1500 aa27.64■■■□□ 2.02
CCDC188-201ENST00000439765 ZNF644Q9H582 1327 aaPredicted RBP27.63■■■□□ 2.01
CCDC188-201ENST00000439765 C3P01024 1663 aa27.63■■■□□ 2.01
CCDC188-201ENST00000439765 MYOM3Q5VTT5 1437 aa27.61■■■□□ 2.01
CCDC188-201ENST00000439765 HNRNPMP52272 730 aaKnown RBP eCLIP27.61■■■□□ 2.01
CCDC188-201ENST00000439765 PLPPR3Q6T4P5 718 aa27.6■■■□□ 2.01
CCDC188-201ENST00000439765 PLXNC1O60486 1568 aa27.59■■■□□ 2.01
CCDC188-201ENST00000439765 SPAG9O60271 1321 aaKnown RBP27.59■■■□□ 2.01
CCDC188-201ENST00000439765 ADGBQ8N7X0 1667 aa27.58■■■□□ 2.01
CCDC188-201ENST00000439765 MBD5Q9P267 1494 aa27.56■■■□□ 2
CCDC188-201ENST00000439765 MROH2AA6NES4 1674 aa27.56■■■□□ 2
CCDC188-201ENST00000439765 ILDR1Q86SU0 546 aaPredicted RBP27.55■■■□□ 2
CCDC188-201ENST00000439765 CEBPAP49715 358 aaPredicted RBP27.52■■■□□ 2
CCDC188-201ENST00000439765 HSPA2P54652 639 aa27.52■■■□□ 2
CCDC188-201ENST00000439765 PTPN23Q9H3S7 1636 aa27.52■■■□□ 2
CCDC188-201ENST00000439765 MIA2Q96PC5 1412 aa27.52■■■□□ 2
CCDC188-201ENST00000439765 CNTLNQ9NXG0 1405 aa27.52■■■□□ 2
CCDC188-201ENST00000439765 ARHGEF5Q12774 1597 aa27.51■■■□□ 2
CCDC188-201ENST00000439765 CCDC141Q6ZP82 1450 aa27.51■■□□□ 1.99
CCDC188-201ENST00000439765 A2MP01023 1474 aa27.5■■□□□ 1.99
CCDC188-201ENST00000439765 RTEL1-TNFRSF6BF6WH68 1400 aa27.46■■□□□ 1.99
CCDC188-201ENST00000439765 FGD6Q6ZV73 1430 aa27.46■■□□□ 1.99
CCDC188-201ENST00000439765 UHRF1BP1Q6BDS2 1440 aa27.46■■□□□ 1.99
CCDC188-201ENST00000439765 ESF1Q9H501 851 aaKnown RBP27.45■■□□□ 1.99
CCDC188-201ENST00000439765 CROCC2H7BZ55 1655 aa27.44■■□□□ 1.98
CCDC188-201ENST00000439765 CLTCQ00610 1675 aaKnown RBP27.44■■□□□ 1.98
CCDC188-201ENST00000439765 STRCQ7RTU9 1775 aa27.43■■□□□ 1.98
CCDC188-201ENST00000439765 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
CCDC188-201ENST00000439765 TCOF1Q13428 1488 aaKnown RBP27.38■■□□□ 1.97
CCDC188-201ENST00000439765 DNMT1P26358 1616 aaKnown RBP27.38■■□□□ 1.97
CCDC188-201ENST00000439765 NPATQ14207 1427 aa27.37■■□□□ 1.97
CCDC188-201ENST00000439765 MAST1Q9Y2H9 1570 aa27.37■■□□□ 1.97
CCDC188-201ENST00000439765 RSPH4AQ5TD94 716 aa27.37■■□□□ 1.97
CCDC188-201ENST00000439765 ZMYM3Q14202 1370 aa27.34■■□□□ 1.97
CCDC188-201ENST00000439765 DHX29Q7Z478 1369 aaKnown RBP27.32■■□□□ 1.96
CCDC188-201ENST00000439765 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
CCDC188-201ENST00000439765 ZNF142P52746 1687 aaPredicted RBP27.3■■□□□ 1.96
CCDC188-201ENST00000439765 FBXO41Q8TF61 875 aa27.3■■□□□ 1.96
CCDC188-201ENST00000439765 TSPY4P0CV99 314 aa27.29■■□□□ 1.96
CCDC188-201ENST00000439765 TSPY10P0CW01 314 aa27.29■■□□□ 1.96
CCDC188-201ENST00000439765 FAM135AQ9P2D6 1515 aa27.29■■□□□ 1.96
CCDC188-201ENST00000439765 SHANK2Q9UPX8 1470 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms