RNA–Protein interactions for RNA: ENST00000439704.1

NMD3P1-201, Transcript of NMD3 ribosome export adaptor pseudogene 1, humanhuman

BASIC

Gene NMD3P1, Length 1,488 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3P1-201ENST00000439704 TMC2Q8TDI7 906 aa9.15□□□□□ -0.95
NMD3P1-201ENST00000439704 KIF3CO14782 793 aa9.14□□□□□ -0.95
NMD3P1-201ENST00000439704 C2orf72A6NCS6 295 aa9.13□□□□□ -0.95
NMD3P1-201ENST00000439704 DOK7Q18PE1 504 aa9.11□□□□□ -0.95
NMD3P1-201ENST00000439704 PAXIP1Q6ZW49 1069 aaPredicted RBP9.1□□□□□ -0.95
NMD3P1-201ENST00000439704 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
NMD3P1-201ENST00000439704 ST18O60284 1047 aa9.09□□□□□ -0.95
NMD3P1-201ENST00000439704 HOXB3P14651 431 aaPredicted RBP9.09□□□□□ -0.95
NMD3P1-201ENST00000439704 LCE2DQ5TA82 110 aaPredicted RBP9.08□□□□□ -0.96
NMD3P1-201ENST00000439704 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
NMD3P1-201ENST00000439704 PDE4AP27815 886 aa9.08□□□□□ -0.96
NMD3P1-201ENST00000439704 RIMBP2O15034 1052 aa9.07□□□□□ -0.96
NMD3P1-201ENST00000439704 FOXK1P85037 733 aa9.07□□□□□ -0.96
NMD3P1-201ENST00000439704 ZNF710Q8N1W2 664 aa9.06□□□□□ -0.96
NMD3P1-201ENST00000439704 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
NMD3P1-201ENST00000439704 ZSWIM6Q9HCJ5 1215 aa9.05□□□□□ -0.96
NMD3P1-201ENST00000439704 NCKAP5LQ9HCH0 1330 aa9.03□□□□□ -0.96
NMD3P1-201ENST00000439704 SLC34A2O95436 690 aa9.02□□□□□ -0.96
NMD3P1-201ENST00000439704 DSG2Q14126 1118 aa9.02□□□□□ -0.96
NMD3P1-201ENST00000439704 PLPP6Q8IY26 295 aa9.02□□□□□ -0.96
NMD3P1-201ENST00000439704 POTEMA6NI47 508 aa9.02□□□□□ -0.97
NMD3P1-201ENST00000439704 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
NMD3P1-201ENST00000439704 HOXB1P14653 301 aaPredicted RBP9.01□□□□□ -0.97
NMD3P1-201ENST00000439704 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
NMD3P1-201ENST00000439704 CADPS2Q86UW7 1296 aa9.01□□□□□ -0.97
NMD3P1-201ENST00000439704 GPR153Q6NV75 609 aa8.99□□□□□ -0.97
NMD3P1-201ENST00000439704 PPP1R15BQ5SWA1 713 aa8.98□□□□□ -0.97
NMD3P1-201ENST00000439704 DDX27Q96GQ7 796 aaKnown RBP8.98□□□□□ -0.97
NMD3P1-201ENST00000439704 MFSD10Q14728 455 aa8.97□□□□□ -0.97
NMD3P1-201ENST00000439704 MARVELD3Q96A59 401 aa8.97□□□□□ -0.97
NMD3P1-201ENST00000439704 ARSIQ5FYB1 569 aa8.96□□□□□ -0.97
NMD3P1-201ENST00000439704 EMP3P54852 163 aa8.96□□□□□ -0.98
NMD3P1-201ENST00000439704 PTCD2Q8WV60 388 aaKnown RBP8.96□□□□□ -0.98
NMD3P1-201ENST00000439704 PCDHGA4Q9Y5G9 962 aa8.95□□□□□ -0.98
NMD3P1-201ENST00000439704 TBC1D12O60347 775 aa8.94□□□□□ -0.98
NMD3P1-201ENST00000439704 PLCB2Q00722 1185 aa8.94□□□□□ -0.98
NMD3P1-201ENST00000439704 PCDH10Q9P2E7 1040 aa8.93□□□□□ -0.98
NMD3P1-201ENST00000439704 TSHZ2Q9NRE2 1034 aa8.91□□□□□ -0.98
NMD3P1-201ENST00000439704 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
NMD3P1-201ENST00000439704 KHSRPQ92945 711 aaKnown RBP eCLIP8.9□□□□□ -0.98
NMD3P1-201ENST00000439704 ERBB3P21860 1342 aa8.9□□□□□ -0.98
NMD3P1-201ENST00000439704 FAM205CA6NFA0 338 aa8.89□□□□□ -0.99
NMD3P1-201ENST00000439704 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
NMD3P1-201ENST00000439704 NUDT7P0C024 238 aa8.88□□□□□ -0.99
NMD3P1-201ENST00000439704 HS3ST6Q96QI5 342 aa8.88□□□□□ -0.99
NMD3P1-201ENST00000439704 KDM4FA0A1W2PPD8 638 aa8.87□□□□□ -0.99
NMD3P1-201ENST00000439704 CAMK2BQ13554 666 aa8.87□□□□□ -0.99
NMD3P1-201ENST00000439704 UPF1Q92900 1129 aaKnown RBP eCLIP8.87□□□□□ -0.99
NMD3P1-201ENST00000439704 ZNF316A6NFI3 1004 aaPredicted RBP8.86□□□□□ -0.99
NMD3P1-201ENST00000439704 CDAN1Q8IWY9 1227 aa8.86□□□□□ -0.99
NMD3P1-201ENST00000439704 POTEB3A0JP26 581 aa8.85□□□□□ -0.99
NMD3P1-201ENST00000439704 POTEBQ6S5H4 581 aa8.85□□□□□ -0.99
NMD3P1-201ENST00000439704 MAP3K9P80192 1104 aa8.84□□□□□ -0.99
NMD3P1-201ENST00000439704 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
NMD3P1-201ENST00000439704 EMILIN3Q9NT22 766 aa8.84□□□□□ -0.99
NMD3P1-201ENST00000439704 LHX6Q9UPM6 363 aa8.83□□□□□ -1
NMD3P1-201ENST00000439704 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
NMD3P1-201ENST00000439704 E2F4Q16254 413 aa8.83□□□□□ -1
NMD3P1-201ENST00000439704 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
NMD3P1-201ENST00000439704 ZNF687Q8N1G0 1237 aa8.81□□□□□ -1
NMD3P1-201ENST00000439704 EVI5O60447 810 aa8.8□□□□□ -1
NMD3P1-201ENST00000439704 HAP1P54257 671 aaPredicted RBP8.78□□□□□ -1
NMD3P1-201ENST00000439704 ARIH1Q9Y4X5 557 aaPredicted RBP8.77□□□□□ -1
NMD3P1-201ENST00000439704 DPYSL4O14531 572 aa8.77□□□□□ -1.01
NMD3P1-201ENST00000439704 PPP4R3BQ5MIZ7 849 aa8.75□□□□□ -1.01
NMD3P1-201ENST00000439704 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
NMD3P1-201ENST00000439704 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
NMD3P1-201ENST00000439704 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
NMD3P1-201ENST00000439704 PBX2P40425 430 aa8.72□□□□□ -1.01
NMD3P1-201ENST00000439704 FOSBP53539 338 aa8.72□□□□□ -1.01
NMD3P1-201ENST00000439704 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.01
NMD3P1-201ENST00000439704 JPH4Q96JJ6 628 aa8.71□□□□□ -1.01
NMD3P1-201ENST00000439704 PTGER2P43116 358 aa8.7□□□□□ -1.02
NMD3P1-201ENST00000439704 PDIA6Q15084 440 aa8.7□□□□□ -1.02
NMD3P1-201ENST00000439704 ARHGEF1Q92888 912 aaKnown RBP8.7□□□□□ -1.02
NMD3P1-201ENST00000439704 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
NMD3P1-201ENST00000439704 ARHGAP33O14559 1287 aa8.69□□□□□ -1.02
NMD3P1-201ENST00000439704 P3H3Q8IVL6 736 aa8.69□□□□□ -1.02
NMD3P1-201ENST00000439704 PHF14O94880 888 aa8.68□□□□□ -1.02
NMD3P1-201ENST00000439704 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
NMD3P1-201ENST00000439704 POTEEQ6S8J3 1075 aa8.67□□□□□ -1.02
NMD3P1-201ENST00000439704 KCNV2Q8TDN2 545 aa8.67□□□□□ -1.02
NMD3P1-201ENST00000439704 BCL2L12Q9HB09 334 aa8.67□□□□□ -1.02
NMD3P1-201ENST00000439704 KDM2AQ9Y2K7 1162 aa8.67□□□□□ -1.02
NMD3P1-201ENST00000439704 PCDHGA10Q9Y5H3 936 aa8.67□□□□□ -1.02
NMD3P1-201ENST00000439704 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
NMD3P1-201ENST00000439704 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
NMD3P1-201ENST00000439704 EPAS1Q99814 870 aa8.66□□□□□ -1.02
NMD3P1-201ENST00000439704 AXIN2Q9Y2T1 843 aa8.66□□□□□ -1.02
NMD3P1-201ENST00000439704 LSM11P83369 360 aaKnown RBP eCLIP8.65□□□□□ -1.02
NMD3P1-201ENST00000439704 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.02
NMD3P1-201ENST00000439704 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
NMD3P1-201ENST00000439704 SPNS2Q8IVW8 549 aa8.64□□□□□ -1.03
NMD3P1-201ENST00000439704 DDX12PQ92771 950 aa8.64□□□□□ -1.03
NMD3P1-201ENST00000439704 PTPREP23469 700 aa8.63□□□□□ -1.03
NMD3P1-201ENST00000439704 ADAM33Q9BZ11 813 aa8.63□□□□□ -1.03
NMD3P1-201ENST00000439704 PSEN2P49810 448 aa8.62□□□□□ -1.03
NMD3P1-201ENST00000439704 KCNK17Q96T54 332 aa8.62□□□□□ -1.03
NMD3P1-201ENST00000439704 PLSCR2Q9NRY7 297 aa8.62□□□□□ -1.03
NMD3P1-201ENST00000439704 TK2O00142 265 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms