RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 BCL11AQ9H165 835 aa21.23■□□□□ 0.99
CDC42EP4-202ENST00000439510 WASHC2AQ641Q2 1341 aa21.23■□□□□ 0.99
CDC42EP4-202ENST00000439510 HNRNPUQ00839 825 aaKnown RBP eCLIP21.2■□□□□ 0.98
CDC42EP4-202ENST00000439510 KDM6BO15054 1643 aa21.19■□□□□ 0.98
CDC42EP4-202ENST00000439510 HSPA5P11021 654 aaKnown RBP21.19■□□□□ 0.98
CDC42EP4-202ENST00000439510 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
CDC42EP4-202ENST00000439510 CNTLNQ9NXG0 1405 aa21.17■□□□□ 0.98
CDC42EP4-202ENST00000439510 MIA2Q96PC5 1412 aa21.15■□□□□ 0.98
CDC42EP4-202ENST00000439510 RRP7BPQ9NSQ0 103 aa21.15■□□□□ 0.98
CDC42EP4-202ENST00000439510 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
CDC42EP4-202ENST00000439510 ERCC6L2Q5T890 1561 aa21.14■□□□□ 0.97
CDC42EP4-202ENST00000439510 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.97
CDC42EP4-202ENST00000439510 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.971e-6■■■■■ 34.3
CDC42EP4-202ENST00000439510 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
CDC42EP4-202ENST00000439510 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
CDC42EP4-202ENST00000439510 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
CDC42EP4-202ENST00000439510 POLR1AO95602 1720 aaPredicted RBP21.11■□□□□ 0.97
CDC42EP4-202ENST00000439510 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
CDC42EP4-202ENST00000439510 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
CDC42EP4-202ENST00000439510 PLB1Q6P1J6 1458 aa21.09■□□□□ 0.97
CDC42EP4-202ENST00000439510 CHIC2Q9UKJ5 165 aa21.08■□□□□ 0.97
CDC42EP4-202ENST00000439510 MPHOSPH9Q99550 1183 aa21.08■□□□□ 0.96
CDC42EP4-202ENST00000439510 CCDC7Q96M83 1385 aa21.07■□□□□ 0.96
CDC42EP4-202ENST00000439510 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
CDC42EP4-202ENST00000439510 MSH5O43196 834 aa21.06■□□□□ 0.96
CDC42EP4-202ENST00000439510 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
CDC42EP4-202ENST00000439510 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
CDC42EP4-202ENST00000439510 CDK11AQ9UQ88 783 aaPredicted RBP21.06■□□□□ 0.96
CDC42EP4-202ENST00000439510 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
CDC42EP4-202ENST00000439510 RPRD2Q5VT52 1461 aaKnown RBP21.05■□□□□ 0.96
CDC42EP4-202ENST00000439510 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
CDC42EP4-202ENST00000439510 ROCK1Q13464 1354 aa21.03■□□□□ 0.96
CDC42EP4-202ENST00000439510 TEX14Q8IWB6 1497 aa21.03■□□□□ 0.96
CDC42EP4-202ENST00000439510 PRKRIP1Q9H875 184 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP4-202ENST00000439510 RAPGEF6Q8TEU7 1601 aa21.03■□□□□ 0.96
CDC42EP4-202ENST00000439510 IRX6P78412 446 aaPredicted RBP21.03■□□□□ 0.96
CDC42EP4-202ENST00000439510 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
CDC42EP4-202ENST00000439510 ANKRD30BQ9BXX2 1392 aa21.02■□□□□ 0.96
CDC42EP4-202ENST00000439510 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
CDC42EP4-202ENST00000439510 DNMT1P26358 1616 aaKnown RBP21.01■□□□□ 0.95
CDC42EP4-202ENST00000439510 PPP4R2Q9NY27 417 aa21.01■□□□□ 0.95
CDC42EP4-202ENST00000439510 PTPRGP23470 1445 aa21■□□□□ 0.95
CDC42EP4-202ENST00000439510 SPATA31E1Q6ZUB1 1445 aa21■□□□□ 0.95
CDC42EP4-202ENST00000439510 NUP153P49790 1475 aaKnown RBP20.99■□□□□ 0.95
CDC42EP4-202ENST00000439510 ZBED9Q6R2W3 1325 aa20.99■□□□□ 0.95
CDC42EP4-202ENST00000439510 DAPK1P53355 1430 aa20.99■□□□□ 0.95
CDC42EP4-202ENST00000439510 NBPF8Q3BBV2 869 aa20.95■□□□□ 0.94
CDC42EP4-202ENST00000439510 FOXD1Q16676 465 aa20.94■□□□□ 0.94
CDC42EP4-202ENST00000439510 MRS2Q9HD23 443 aa20.93■□□□□ 0.94
CDC42EP4-202ENST00000439510 ABCC5O15440 1437 aa20.93■□□□□ 0.94
CDC42EP4-202ENST00000439510 KIF7Q2M1P5 1343 aa20.91■□□□□ 0.94
CDC42EP4-202ENST00000439510 ABCA8O94911 1581 aa20.9■□□□□ 0.94
CDC42EP4-202ENST00000439510 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
CDC42EP4-202ENST00000439510 MBD5Q9P267 1494 aa20.87■□□□□ 0.93
CDC42EP4-202ENST00000439510 PZPP20742 1482 aa20.85■□□□□ 0.93
CDC42EP4-202ENST00000439510 ADGBQ8N7X0 1667 aa20.84■□□□□ 0.93
CDC42EP4-202ENST00000439510 SLC4A1APQ9BWU0 796 aaKnown RBP20.83■□□□□ 0.93
CDC42EP4-202ENST00000439510 ATP10BO94823 1461 aa20.83■□□□□ 0.92
CDC42EP4-202ENST00000439510 SMG6Q86US8 1419 aaKnown RBP20.82■□□□□ 0.92
CDC42EP4-202ENST00000439510 DHX29Q7Z478 1369 aaKnown RBP20.82■□□□□ 0.92
CDC42EP4-202ENST00000439510 BCORL1Q5H9F3 1711 aa20.81■□□□□ 0.92
CDC42EP4-202ENST00000439510 KIF14Q15058 1648 aa20.8■□□□□ 0.92
CDC42EP4-202ENST00000439510 B4GALNT3Q6L9W6 998 aa20.8■□□□□ 0.92
CDC42EP4-202ENST00000439510 ITSN2Q9NZM3 1697 aa20.79■□□□□ 0.92
CDC42EP4-202ENST00000439510 ZNF644Q9H582 1327 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP4-202ENST00000439510 CROCC2H7BZ55 1655 aa20.78■□□□□ 0.92
CDC42EP4-202ENST00000439510 KDM5CP41229 1560 aa20.77■□□□□ 0.92
CDC42EP4-202ENST00000439510 ABCC2Q92887 1545 aa20.77■□□□□ 0.92
CDC42EP4-202ENST00000439510 ADGRL2O95490 1459 aa20.76■□□□□ 0.91
CDC42EP4-202ENST00000439510 CAMSAP2Q08AD1 1489 aa20.76■□□□□ 0.91
CDC42EP4-202ENST00000439510 RNF123Q5XPI4 1314 aa20.75■□□□□ 0.91
CDC42EP4-202ENST00000439510 KIAA1107Q9UPP5 1409 aa20.75■□□□□ 0.91
CDC42EP4-202ENST00000439510 ARID4BQ4LE39 1312 aaPredicted RBP20.75■□□□□ 0.91
CDC42EP4-202ENST00000439510 PLEKHD1A6NEE1 506 aa20.75■□□□□ 0.91
CDC42EP4-202ENST00000439510 ADCY10Q96PN6 1610 aa20.74■□□□□ 0.91
CDC42EP4-202ENST00000439510 USP47Q96K76 1375 aa20.73■□□□□ 0.91
CDC42EP4-202ENST00000439510 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
CDC42EP4-202ENST00000439510 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
CDC42EP4-202ENST00000439510 NUDCQ9Y266 331 aa20.71■□□□□ 0.91
CDC42EP4-202ENST00000439510 ZCCHC11Q5TAX3 1644 aaKnown RBP20.69■□□□□ 0.9
CDC42EP4-202ENST00000439510 UHRF1BP1Q6BDS2 1440 aa20.69■□□□□ 0.9
CDC42EP4-202ENST00000439510 GPATCH8Q9UKJ3 1502 aaKnown RBP20.68■□□□□ 0.9
CDC42EP4-202ENST00000439510 RALGAPBQ86X10 1494 aa20.67■□□□□ 0.9
CDC42EP4-202ENST00000439510 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
CDC42EP4-202ENST00000439510 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
CDC42EP4-202ENST00000439510 ARHGEF12Q9NZN5 1544 aa20.64■□□□□ 0.9
CDC42EP4-202ENST00000439510 CFDP1Q9UEE9 299 aaPredicted RBP20.64■□□□□ 0.89
CDC42EP4-202ENST00000439510 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
CDC42EP4-202ENST00000439510 UHRF1BP1LA0JNW5 1464 aa20.63■□□□□ 0.89
CDC42EP4-202ENST00000439510 RIMBP3CA6NJZ7 1639 aa20.63■□□□□ 0.89
CDC42EP4-202ENST00000439510 RIMBP3BA6NNM3 1639 aa20.63■□□□□ 0.89
CDC42EP4-202ENST00000439510 RIMBP3Q9UFD9 1639 aa20.63■□□□□ 0.89
CDC42EP4-202ENST00000439510 ANKRD30AQ9BXX3 1397 aa20.62■□□□□ 0.89
CDC42EP4-202ENST00000439510 PNISRQ8TF01 805 aaKnown RBP20.62■□□□□ 0.89
CDC42EP4-202ENST00000439510 PKD2Q13563 968 aa20.61■□□□□ 0.89
CDC42EP4-202ENST00000439510 E9PCH4 1651 aa20.6■□□□□ 0.89
CDC42EP4-202ENST00000439510 ANKRD50Q9ULJ7 1429 aa20.6■□□□□ 0.89
CDC42EP4-202ENST00000439510 KDM5DQ9BY66 1539 aa20.6■□□□□ 0.89
CDC42EP4-202ENST00000439510 NOP58Q9Y2X3 529 aaKnown RBP20.6■□□□□ 0.89
CDC42EP4-202ENST00000439510 SHANK2Q9UPX8 1470 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms