RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ITSN2Q9NZM3 1697 aa25.41■■□□□ 1.66
SNRPB-202ENST00000438552 NCOA2Q15596 1464 aa25.4■■□□□ 1.66
SNRPB-202ENST00000438552 APLP2Q06481 763 aa25.39■■□□□ 1.66
SNRPB-202ENST00000438552 KANK4Q5T7N3 995 aaPredicted RBP25.39■■□□□ 1.66
SNRPB-202ENST00000438552 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
SNRPB-202ENST00000438552 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
SNRPB-202ENST00000438552 AKNAQ7Z591 1439 aa25.36■■□□□ 1.65
SNRPB-202ENST00000438552 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
SNRPB-202ENST00000438552 PHLDB1Q86UU1 1377 aa25.34■■□□□ 1.65
SNRPB-202ENST00000438552 RICTORQ6R327 1708 aa25.33■■□□□ 1.65
SNRPB-202ENST00000438552 ADGRL1O94910 1474 aa25.33■■□□□ 1.65
SNRPB-202ENST00000438552 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
SNRPB-202ENST00000438552 EFCAB2Q5VUJ9 269 aa25.3■■□□□ 1.64
SNRPB-202ENST00000438552 ABCC1P33527 1531 aa25.3■■□□□ 1.64
SNRPB-202ENST00000438552 DENND4BO75064 1496 aaPredicted RBP25.27■■□□□ 1.64
SNRPB-202ENST00000438552 SCAPERQ9BY12 1400 aa25.25■■□□□ 1.63
SNRPB-202ENST00000438552 SYCP2Q9BX26 1530 aa25.23■■□□□ 1.63
SNRPB-202ENST00000438552 POGZQ7Z3K3 1410 aa25.23■■□□□ 1.63
SNRPB-202ENST00000438552 CFDP1Q9UEE9 299 aaPredicted RBP25.22■■□□□ 1.63
SNRPB-202ENST00000438552 ARHGEF12Q9NZN5 1544 aa25.22■■□□□ 1.63
SNRPB-202ENST00000438552 RAPGEF3O95398 923 aa25.21■■□□□ 1.63
SNRPB-202ENST00000438552 ZNF777Q9ULD5 760 aaPredicted RBP25.21■■□□□ 1.63
SNRPB-202ENST00000438552 MYOM3Q5VTT5 1437 aa25.2■■□□□ 1.63
SNRPB-202ENST00000438552 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
SNRPB-202ENST00000438552 CAMSAP2Q08AD1 1489 aa25.18■■□□□ 1.62
SNRPB-202ENST00000438552 KDM5CP41229 1560 aa25.17■■□□□ 1.62
SNRPB-202ENST00000438552 ZNF518AQ6AHZ1 1483 aa25.16■■□□□ 1.62
SNRPB-202ENST00000438552 PLEKHH2Q8IVE3 1493 aa25.16■■□□□ 1.62
SNRPB-202ENST00000438552 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
SNRPB-202ENST00000438552 TRAPPC8Q9Y2L5 1435 aa25.14■■□□□ 1.62
SNRPB-202ENST00000438552 ARHGEF40Q8TER5 1519 aa25.14■■□□□ 1.62
SNRPB-202ENST00000438552 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
SNRPB-202ENST00000438552 HECW2Q9P2P5 1572 aa25.13■■□□□ 1.61
SNRPB-202ENST00000438552 PTPN23Q9H3S7 1636 aa25.12■■□□□ 1.61
SNRPB-202ENST00000438552 KIAA1107Q9UPP5 1409 aa25.12■■□□□ 1.61
SNRPB-202ENST00000438552 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
SNRPB-202ENST00000438552 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
SNRPB-202ENST00000438552 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
SNRPB-202ENST00000438552 HNRNPMP52272 730 aaKnown RBP eCLIP25.07■■□□□ 1.6
SNRPB-202ENST00000438552 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
SNRPB-202ENST00000438552 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
SNRPB-202ENST00000438552 YEATS2Q9ULM3 1422 aa25.06■■□□□ 1.6
SNRPB-202ENST00000438552 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
SNRPB-202ENST00000438552 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
SNRPB-202ENST00000438552 ABCA6Q8N139 1617 aa25.05■■□□□ 1.6
SNRPB-202ENST00000438552 MAGI2Q86UL8 1455 aa25.05■■□□□ 1.6
SNRPB-202ENST00000438552 KIDINS220Q9ULH0 1771 aa25.05■■□□□ 1.6
SNRPB-202ENST00000438552 TCOF1Q13428 1488 aaKnown RBP25.02■■□□□ 1.6
SNRPB-202ENST00000438552 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
SNRPB-202ENST00000438552 DIP2CQ9Y2E4 1556 aa25.02■■□□□ 1.6
SNRPB-202ENST00000438552 MLH3Q9UHC1 1453 aa25.02■■□□□ 1.6
SNRPB-202ENST00000438552 CROCC2H7BZ55 1655 aa25.01■■□□□ 1.59
SNRPB-202ENST00000438552 ATP7AQ04656 1500 aa25.01■■□□□ 1.59
SNRPB-202ENST00000438552 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
SNRPB-202ENST00000438552 DNMT1P26358 1616 aaKnown RBP24.97■■□□□ 1.59
SNRPB-202ENST00000438552 MYT1LQ9UL68 1186 aa24.96■■□□□ 1.59
SNRPB-202ENST00000438552 SPAG9O60271 1321 aaKnown RBP24.95■■□□□ 1.58
SNRPB-202ENST00000438552 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
SNRPB-202ENST00000438552 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
SNRPB-202ENST00000438552 ATP10AO60312 1499 aa24.92■■□□□ 1.58
SNRPB-202ENST00000438552 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
SNRPB-202ENST00000438552 ILDR1Q86SU0 546 aaPredicted RBP24.91■■□□□ 1.58
SNRPB-202ENST00000438552 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
SNRPB-202ENST00000438552 DAPK1P53355 1430 aa24.89■■□□□ 1.58
SNRPB-202ENST00000438552 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
SNRPB-202ENST00000438552 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
SNRPB-202ENST00000438552 RTEL1-TNFRSF6BF6WH68 1400 aa24.87■■□□□ 1.57
SNRPB-202ENST00000438552 ABCC5O15440 1437 aa24.87■■□□□ 1.57
SNRPB-202ENST00000438552 BCORL1Q5H9F3 1711 aa24.86■■□□□ 1.57
SNRPB-202ENST00000438552 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
SNRPB-202ENST00000438552 PLXNC1O60486 1568 aa24.85■■□□□ 1.57
SNRPB-202ENST00000438552 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.57
SNRPB-202ENST00000438552 TSPY4P0CV99 314 aa24.81■■□□□ 1.56
SNRPB-202ENST00000438552 TSPY10P0CW01 314 aa24.81■■□□□ 1.56
SNRPB-202ENST00000438552 A2MP01023 1474 aa24.81■■□□□ 1.56
SNRPB-202ENST00000438552 ARID4BQ4LE39 1312 aaPredicted RBP24.81■■□□□ 1.56
SNRPB-202ENST00000438552 ADAMTSL3P82987 1691 aa24.79■■□□□ 1.56
SNRPB-202ENST00000438552 AGLP35573 1532 aa24.79■■□□□ 1.56
SNRPB-202ENST00000438552 MADDQ8WXG6 1647 aa24.77■■□□□ 1.56
SNRPB-202ENST00000438552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.554e-8■■□□□ 13.5
SNRPB-202ENST00000438552 FER1L4A9Z1Z3 1794 aa24.75■■□□□ 1.55
SNRPB-202ENST00000438552 KDM4FA0A1W2PPD8 638 aa24.74■■□□□ 1.55
SNRPB-202ENST00000438552 ADGRL2O95490 1459 aa24.73■■□□□ 1.55
SNRPB-202ENST00000438552 PTPRKQ15262 1439 aa24.73■■□□□ 1.55
SNRPB-202ENST00000438552 CHIC2Q9UKJ5 165 aa24.72■■□□□ 1.55
SNRPB-202ENST00000438552 RIMS1Q86UR5 1692 aaKnown RBP24.72■■□□□ 1.55
SNRPB-202ENST00000438552 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
SNRPB-202ENST00000438552 DHX29Q7Z478 1369 aaKnown RBP24.7■■□□□ 1.55
SNRPB-202ENST00000438552 KIF15Q9NS87 1388 aa24.7■■□□□ 1.55
SNRPB-202ENST00000438552 MLECQ14165 292 aa24.7■■□□□ 1.54
SNRPB-202ENST00000438552 EIF2AK4Q9P2K8 1649 aaKnown RBP24.69■■□□□ 1.54
SNRPB-202ENST00000438552 ITGAEP38570 1179 aa24.68■■□□□ 1.54
SNRPB-202ENST00000438552 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
SNRPB-202ENST00000438552 NCOA1Q15788 1441 aa24.66■■□□□ 1.54
SNRPB-202ENST00000438552 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.54
SNRPB-202ENST00000438552 RRP7BPQ9NSQ0 103 aa24.64■■□□□ 1.54
SNRPB-202ENST00000438552 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
SNRPB-202ENST00000438552 CLTCQ00610 1675 aaKnown RBP24.6■■□□□ 1.53
SNRPB-202ENST00000438552 MROH1Q8NDA8 1641 aa24.6■■□□□ 1.53
SNRPB-202ENST00000438552 ROCK1Q13464 1354 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms