RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 TTC37Q6PGP7 1564 aa14.67□□□□□ -0.06
SCRN1-208ENST00000438497 CFAP74Q9C0B2 1584 aa14.67□□□□□ -0.06
SCRN1-208ENST00000438497 ZMYM4Q5VZL5 1548 aa14.66□□□□□ -0.06
SCRN1-208ENST00000438497 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
SCRN1-208ENST00000438497 SETD1BQ9UPS6 1966 aaKnown RBP14.66□□□□□ -0.06
SCRN1-208ENST00000438497 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
SCRN1-208ENST00000438497 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
SCRN1-208ENST00000438497 ATP10AO60312 1499 aa14.66□□□□□ -0.06
SCRN1-208ENST00000438497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCRN1-208ENST00000438497 STRCQ7RTU9 1775 aa14.65□□□□□ -0.06
SCRN1-208ENST00000438497 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
SCRN1-208ENST00000438497 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
SCRN1-208ENST00000438497 MYT1LQ9UL68 1186 aa14.63□□□□□ -0.07
SCRN1-208ENST00000438497 UHRF1BP1Q6BDS2 1440 aa14.62□□□□□ -0.07
SCRN1-208ENST00000438497 ARHGEF12Q9NZN5 1544 aa14.61□□□□□ -0.07
SCRN1-208ENST00000438497 PTPRTO14522 1441 aa14.6□□□□□ -0.07
SCRN1-208ENST00000438497 PLCH2O75038 1416 aa14.6□□□□□ -0.07
SCRN1-208ENST00000438497 C9orf84Q5VXU9 1444 aa14.59□□□□□ -0.07
SCRN1-208ENST00000438497 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
SCRN1-208ENST00000438497 AFAP1Q8N556 730 aa14.58□□□□□ -0.08
SCRN1-208ENST00000438497 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
SCRN1-208ENST00000438497 LTBP4Q8N2S1 1624 aa14.53□□□□□ -0.08
SCRN1-208ENST00000438497 UBAP1LF5GYI3 381 aa14.53□□□□□ -0.08
SCRN1-208ENST00000438497 CDK11AQ9UQ88 783 aaPredicted RBP14.53□□□□□ -0.08
SCRN1-208ENST00000438497 IQSEC2Q5JU85 1478 aa14.51□□□□□ -0.09
SCRN1-208ENST00000438497 TRAPPC8Q9Y2L5 1435 aa14.51□□□□□ -0.09
SCRN1-208ENST00000438497 CDK13Q14004 1512 aaKnown RBP14.51□□□□□ -0.09
SCRN1-208ENST00000438497 ZNF518AQ6AHZ1 1483 aa14.5□□□□□ -0.09
SCRN1-208ENST00000438497 C3P01024 1663 aa14.49□□□□□ -0.09
SCRN1-208ENST00000438497 NCKAP5LQ9HCH0 1330 aa14.47□□□□□ -0.09
SCRN1-208ENST00000438497 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
SCRN1-208ENST00000438497 NCOA1Q15788 1441 aa14.46□□□□□ -0.09
SCRN1-208ENST00000438497 ZNF335Q9H4Z2 1342 aaPredicted RBP14.45□□□□□ -0.1
SCRN1-208ENST00000438497 DIP2CQ9Y2E4 1556 aa14.43□□□□□ -0.1
SCRN1-208ENST00000438497 ARHGAP5Q13017 1502 aa14.43□□□□□ -0.1
SCRN1-208ENST00000438497 KDM5CP41229 1560 aa14.43□□□□□ -0.1
SCRN1-208ENST00000438497 CAMSAP1Q5T5Y3 1602 aa14.42□□□□□ -0.1
SCRN1-208ENST00000438497 MLH3Q9UHC1 1453 aa14.42□□□□□ -0.1
SCRN1-208ENST00000438497 PKD2Q13563 968 aa14.41□□□□□ -0.1
SCRN1-208ENST00000438497 REREQ9P2R6 1566 aa14.41□□□□□ -0.1
SCRN1-208ENST00000438497 AGLP35573 1532 aa14.41□□□□□ -0.1
SCRN1-208ENST00000438497 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
SCRN1-208ENST00000438497 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
SCRN1-208ENST00000438497 ZMYM3Q14202 1370 aa14.4□□□□□ -0.1
SCRN1-208ENST00000438497 EEA1Q15075 1411 aa14.4□□□□□ -0.1
SCRN1-208ENST00000438497 HSPA1LP34931 641 aa14.39□□□□□ -0.11
SCRN1-208ENST00000438497 KIF14Q15058 1648 aa14.38□□□□□ -0.11
SCRN1-208ENST00000438497 ABCA6Q8N139 1617 aa14.38□□□□□ -0.11
SCRN1-208ENST00000438497 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
SCRN1-208ENST00000438497 PIP4K2BP78356 416 aa14.38□□□□□ -0.11
SCRN1-208ENST00000438497 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
SCRN1-208ENST00000438497 TROQ12816 1431 aaPredicted RBP14.38□□□□□ -0.11
SCRN1-208ENST00000438497 FMN1Q68DA7 1419 aa14.38□□□□□ -0.11
SCRN1-208ENST00000438497 CLIP1P30622 1438 aa14.37□□□□□ -0.11
SCRN1-208ENST00000438497 NPATQ14207 1427 aa14.37□□□□□ -0.11
SCRN1-208ENST00000438497 TOM1O60784 492 aa14.36□□□□□ -0.11
SCRN1-208ENST00000438497 CDC42BPBQ9Y5S2 1711 aa14.35□□□□□ -0.11
SCRN1-208ENST00000438497 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
SCRN1-208ENST00000438497 ZNF777Q9ULD5 760 aaPredicted RBP14.34□□□□□ -0.11
SCRN1-208ENST00000438497 PHF23Q9BUL5 403 aaPredicted RBP14.33□□□□□ -0.12
SCRN1-208ENST00000438497 KIDINS220Q9ULH0 1771 aa14.32□□□□□ -0.12
SCRN1-208ENST00000438497 GGT6Q6P531 493 aa14.32□□□□□ -0.12
SCRN1-208ENST00000438497 SUPT6HQ7KZ85 1726 aaKnown RBP14.31□□□□□ -0.12
SCRN1-208ENST00000438497 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
SCRN1-208ENST00000438497 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCRN1-208ENST00000438497 SPAG9O60271 1321 aaKnown RBP14.3□□□□□ -0.12
SCRN1-208ENST00000438497 PLA2R1Q13018 1463 aa14.3□□□□□ -0.12
SCRN1-208ENST00000438497 MED1Q15648 1581 aaPredicted RBP14.29□□□□□ -0.12
SCRN1-208ENST00000438497 ABCC1P33527 1531 aa14.28□□□□□ -0.12
SCRN1-208ENST00000438497 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
SCRN1-208ENST00000438497 ITSN2Q9NZM3 1697 aa14.28□□□□□ -0.12
SCRN1-208ENST00000438497 ARHGAP35Q9NRY4 1499 aa14.27□□□□□ -0.12
SCRN1-208ENST00000438497 CLTCQ00610 1675 aaKnown RBP14.26□□□□□ -0.13
SCRN1-208ENST00000438497 PTPRKQ15262 1439 aa14.26□□□□□ -0.13
SCRN1-208ENST00000438497 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
SCRN1-208ENST00000438497 CEP170BQ9Y4F5 1589 aaPredicted RBP14.25□□□□□ -0.13
SCRN1-208ENST00000438497 LRRIQ1Q96JM4 1722 aa14.24□□□□□ -0.13
SCRN1-208ENST00000438497 SAMD9LQ8IVG5 1584 aa14.24□□□□□ -0.13
SCRN1-208ENST00000438497 MYO3AQ8NEV4 1616 aa14.23□□□□□ -0.13
SCRN1-208ENST00000438497 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
SCRN1-208ENST00000438497 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
SCRN1-208ENST00000438497 ANKLE2Q86XL3 938 aa14.22□□□□□ -0.13
SCRN1-208ENST00000438497 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
SCRN1-208ENST00000438497 CDC42BPAQ5VT25 1732 aa14.21□□□□□ -0.13
SCRN1-208ENST00000438497 CPS1P31327 1500 aa14.2□□□□□ -0.14
SCRN1-208ENST00000438497 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
SCRN1-208ENST00000438497 A2MP01023 1474 aa14.2□□□□□ -0.14
SCRN1-208ENST00000438497 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
SCRN1-208ENST00000438497 FBXO31Q5XUX0 539 aaPredicted RBP14.19□□□□□ -0.14
SCRN1-208ENST00000438497 THEMISQ8N1K5 641 aaPredicted RBP14.19□□□□□ -0.14
SCRN1-208ENST00000438497 DNMT1P26358 1616 aaKnown RBP14.19□□□□□ -0.14
SCRN1-208ENST00000438497 ATP7AQ04656 1500 aa14.17□□□□□ -0.14
SCRN1-208ENST00000438497 SYCP2Q9BX26 1530 aa14.17□□□□□ -0.14
SCRN1-208ENST00000438497 CCDC18Q5T9S5 1454 aa14.17□□□□□ -0.14
SCRN1-208ENST00000438497 CASKIN1Q8WXD9 1431 aa14.16□□□□□ -0.14
SCRN1-208ENST00000438497 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
SCRN1-208ENST00000438497 GPATCH8Q9UKJ3 1502 aaKnown RBP14.15□□□□□ -0.14
SCRN1-208ENST00000438497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.15□□□□□ -0.14
SCRN1-208ENST00000438497 TNRQ92752 1358 aa14.14□□□□□ -0.15
SCRN1-208ENST00000438497 PLEKHH2Q8IVE3 1493 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms