RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
SCRN1-208ENST00000438497 ABCC9O60706 1549 aa20.48■□□□□ 0.87
SCRN1-208ENST00000438497 CCDC180Q9P1Z9 1646 aa19.93■□□□□ 0.78
SCRN1-208ENST00000438497 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
SCRN1-208ENST00000438497 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
SCRN1-208ENST00000438497 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
SCRN1-208ENST00000438497 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
SCRN1-208ENST00000438497 NACADO15069 1562 aa19■□□□□ 0.63
SCRN1-208ENST00000438497 UNC13AQ9UPW8 1703 aa18.79■□□□□ 0.6
SCRN1-208ENST00000438497 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
SCRN1-208ENST00000438497 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
SCRN1-208ENST00000438497 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
SCRN1-208ENST00000438497 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
SCRN1-208ENST00000438497 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
SCRN1-208ENST00000438497 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
SCRN1-208ENST00000438497 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
SCRN1-208ENST00000438497 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
SCRN1-208ENST00000438497 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
SCRN1-208ENST00000438497 ZCCHC6Q5VYS8 1495 aaKnown RBP18.12■□□□□ 0.49
SCRN1-208ENST00000438497 CUX2O14529 1486 aa17.8■□□□□ 0.44
SCRN1-208ENST00000438497 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
SCRN1-208ENST00000438497 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
SCRN1-208ENST00000438497 TRIM41Q8WV44 630 aa17.47■□□□□ 0.39
SCRN1-208ENST00000438497 NESP48681 1621 aa17.45■□□□□ 0.38
SCRN1-208ENST00000438497 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
SCRN1-208ENST00000438497 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
SCRN1-208ENST00000438497 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
SCRN1-208ENST00000438497 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
SCRN1-208ENST00000438497 THOC2Q8NI27 1593 aaKnown RBP17.28■□□□□ 0.36
SCRN1-208ENST00000438497 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
SCRN1-208ENST00000438497 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
SCRN1-208ENST00000438497 PDS5BQ9NTI5 1447 aa17.2■□□□□ 0.34
SCRN1-208ENST00000438497 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
SCRN1-208ENST00000438497 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
SCRN1-208ENST00000438497 PEG3Q9GZU2 1588 aa17.08■□□□□ 0.32
SCRN1-208ENST00000438497 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
SCRN1-208ENST00000438497 CADPSQ9ULU8 1353 aa17.05■□□□□ 0.32
SCRN1-208ENST00000438497 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
SCRN1-208ENST00000438497 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
SCRN1-208ENST00000438497 WDR62O43379 1518 aa16.96■□□□□ 0.3
SCRN1-208ENST00000438497 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
SCRN1-208ENST00000438497 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
SCRN1-208ENST00000438497 WIZO95785 1651 aa16.77■□□□□ 0.28
SCRN1-208ENST00000438497 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
SCRN1-208ENST00000438497 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
SCRN1-208ENST00000438497 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
SCRN1-208ENST00000438497 CYB5RLQ6IPT4 315 aa16.71■□□□□ 0.27
SCRN1-208ENST00000438497 CFTRP13569 1480 aa16.71■□□□□ 0.27
SCRN1-208ENST00000438497 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
SCRN1-208ENST00000438497 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
SCRN1-208ENST00000438497 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
SCRN1-208ENST00000438497 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
SCRN1-208ENST00000438497 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
SCRN1-208ENST00000438497 IFT140Q96RY7 1462 aa16.55■□□□□ 0.24
SCRN1-208ENST00000438497 FBLN2P98095 1184 aa16.51■□□□□ 0.23
SCRN1-208ENST00000438497 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
SCRN1-208ENST00000438497 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
SCRN1-208ENST00000438497 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
SCRN1-208ENST00000438497 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
SCRN1-208ENST00000438497 ARAP1Q96P48 1450 aa16.44■□□□□ 0.22
SCRN1-208ENST00000438497 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCRN1-208ENST00000438497 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
SCRN1-208ENST00000438497 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
SCRN1-208ENST00000438497 CHD1O14646 1710 aa16.4■□□□□ 0.22
SCRN1-208ENST00000438497 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
SCRN1-208ENST00000438497 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
SCRN1-208ENST00000438497 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
SCRN1-208ENST00000438497 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
SCRN1-208ENST00000438497 TDRD9Q8NDG6 1382 aaKnown RBP16.27■□□□□ 0.2
SCRN1-208ENST00000438497 POLA1P09884 1462 aaPredicted RBP16.23■□□□□ 0.19
SCRN1-208ENST00000438497 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
SCRN1-208ENST00000438497 SOGA1O94964 1423 aa16.23■□□□□ 0.19
SCRN1-208ENST00000438497 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
SCRN1-208ENST00000438497 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
SCRN1-208ENST00000438497 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
SCRN1-208ENST00000438497 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
SCRN1-208ENST00000438497 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
SCRN1-208ENST00000438497 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
SCRN1-208ENST00000438497 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
SCRN1-208ENST00000438497 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
SCRN1-208ENST00000438497 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
SCRN1-208ENST00000438497 CUX1P39880 1505 aa15.98■□□□□ 0.15
SCRN1-208ENST00000438497 PBRM1Q86U86 1689 aa15.94■□□□□ 0.14
SCRN1-208ENST00000438497 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
SCRN1-208ENST00000438497 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
SCRN1-208ENST00000438497 CEP170Q5SW79 1584 aa15.87■□□□□ 0.13
SCRN1-208ENST00000438497 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
SCRN1-208ENST00000438497 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
SCRN1-208ENST00000438497 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
SCRN1-208ENST00000438497 FAM69CQ0P6D2 419 aa15.85■□□□□ 0.13
SCRN1-208ENST00000438497 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCRN1-208ENST00000438497 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.12
SCRN1-208ENST00000438497 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
SCRN1-208ENST00000438497 NUP160Q12769 1436 aa15.81■□□□□ 0.12
SCRN1-208ENST00000438497 KDM4FA0A1W2PPD8 638 aa15.8■□□□□ 0.12
SCRN1-208ENST00000438497 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
SCRN1-208ENST00000438497 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
SCRN1-208ENST00000438497 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
SCRN1-208ENST00000438497 FHAD1B1AJZ9 1412 aa15.76■□□□□ 0.11
SCRN1-208ENST00000438497 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms