RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 CASKIN1Q8WXD9 1431 aa23.73■■□□□ 1.39
TNFRSF1A-203ENST00000437813 SCAPERQ9BY12 1400 aa23.72■■□□□ 1.39
TNFRSF1A-203ENST00000437813 ZFYVE16Q7Z3T8 1539 aa23.72■■□□□ 1.39
TNFRSF1A-203ENST00000437813 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF1A-203ENST00000437813 ATP1B4Q9UN42 357 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF1A-203ENST00000437813 CDC42BPBQ9Y5S2 1711 aa23.66■■□□□ 1.38
TNFRSF1A-203ENST00000437813 CCDC18Q5T9S5 1454 aa23.66■■□□□ 1.38
TNFRSF1A-203ENST00000437813 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
TNFRSF1A-203ENST00000437813 KDM5CP41229 1560 aa23.65■■□□□ 1.38
TNFRSF1A-203ENST00000437813 CLIP1P30622 1438 aa23.64■■□□□ 1.37
TNFRSF1A-203ENST00000437813 FYCO1Q9BQS8 1478 aa23.63■■□□□ 1.37
TNFRSF1A-203ENST00000437813 RIMS1Q86UR5 1692 aaKnown RBP23.62■■□□□ 1.37
TNFRSF1A-203ENST00000437813 PREX2Q70Z35 1606 aa23.62■■□□□ 1.37
TNFRSF1A-203ENST00000437813 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
TNFRSF1A-203ENST00000437813 ARHGAP5Q13017 1502 aa23.61■■□□□ 1.37
TNFRSF1A-203ENST00000437813 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
TNFRSF1A-203ENST00000437813 ATP10AO60312 1499 aa23.58■■□□□ 1.37
TNFRSF1A-203ENST00000437813 LMTK3Q96Q04 1460 aa23.57■■□□□ 1.36
TNFRSF1A-203ENST00000437813 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
TNFRSF1A-203ENST00000437813 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
TNFRSF1A-203ENST00000437813 ABCC1P33527 1531 aa23.55■■□□□ 1.36
TNFRSF1A-203ENST00000437813 C9orf84Q5VXU9 1444 aa23.55■■□□□ 1.36
TNFRSF1A-203ENST00000437813 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
TNFRSF1A-203ENST00000437813 DIP2CQ9Y2E4 1556 aa23.52■■□□□ 1.36
TNFRSF1A-203ENST00000437813 FER1L4A9Z1Z3 1794 aa23.52■■□□□ 1.36
TNFRSF1A-203ENST00000437813 REREQ9P2R6 1566 aa23.52■■□□□ 1.36
TNFRSF1A-203ENST00000437813 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
TNFRSF1A-203ENST00000437813 MLH3Q9UHC1 1453 aa23.51■■□□□ 1.35
TNFRSF1A-203ENST00000437813 ILDR1Q86SU0 546 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF1A-203ENST00000437813 TRAPPC8Q9Y2L5 1435 aa23.5■■□□□ 1.35
TNFRSF1A-203ENST00000437813 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
TNFRSF1A-203ENST00000437813 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
TNFRSF1A-203ENST00000437813 SAMD9LQ8IVG5 1584 aa23.45■■□□□ 1.34
TNFRSF1A-203ENST00000437813 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
TNFRSF1A-203ENST00000437813 AGLP35573 1532 aa23.43■■□□□ 1.34
TNFRSF1A-203ENST00000437813 MLECQ14165 292 aa23.42■■□□□ 1.34
TNFRSF1A-203ENST00000437813 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
TNFRSF1A-203ENST00000437813 SYCP2Q9BX26 1530 aa23.37■■□□□ 1.33
TNFRSF1A-203ENST00000437813 KIAA1107Q9UPP5 1409 aa23.35■■□□□ 1.33
TNFRSF1A-203ENST00000437813 HSPA2P54652 639 aa23.33■■□□□ 1.33
TNFRSF1A-203ENST00000437813 PREX1Q8TCU6 1659 aa23.32■■□□□ 1.32
TNFRSF1A-203ENST00000437813 TIAM1Q13009 1591 aa23.32■■□□□ 1.32
TNFRSF1A-203ENST00000437813 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
TNFRSF1A-203ENST00000437813 EHBP1L1Q8N3D4 1523 aa23.31■■□□□ 1.32
TNFRSF1A-203ENST00000437813 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
TNFRSF1A-203ENST00000437813 CEBPAP49715 358 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF1A-203ENST00000437813 PLEKHH2Q8IVE3 1493 aa23.3■■□□□ 1.32
TNFRSF1A-203ENST00000437813 C3P01024 1663 aa23.29■■□□□ 1.32
TNFRSF1A-203ENST00000437813 SETD1BQ9UPS6 1966 aaKnown RBP23.29■■□□□ 1.32
TNFRSF1A-203ENST00000437813 CCNB3Q8WWL7 1395 aa23.28■■□□□ 1.32
TNFRSF1A-203ENST00000437813 ATP7AQ04656 1500 aa23.28■■□□□ 1.32
TNFRSF1A-203ENST00000437813 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
TNFRSF1A-203ENST00000437813 HNRNPMP52272 730 aaKnown RBP eCLIP23.27■■□□□ 1.32
TNFRSF1A-203ENST00000437813 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
TNFRSF1A-203ENST00000437813 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF1A-203ENST00000437813 ZNF777Q9ULD5 760 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF1A-203ENST00000437813 MBD5Q9P267 1494 aa23.25■■□□□ 1.31
TNFRSF1A-203ENST00000437813 MYT1LQ9UL68 1186 aa23.24■■□□□ 1.31
TNFRSF1A-203ENST00000437813 SPAG9O60271 1321 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-203ENST00000437813 ZNF644Q9H582 1327 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1A-203ENST00000437813 STRCQ7RTU9 1775 aa23.21■■□□□ 1.31
TNFRSF1A-203ENST00000437813 MROH2AA6NES4 1674 aa23.2■■□□□ 1.3
TNFRSF1A-203ENST00000437813 CNTLNQ9NXG0 1405 aa23.19■■□□□ 1.3
TNFRSF1A-203ENST00000437813 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
TNFRSF1A-203ENST00000437813 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
TNFRSF1A-203ENST00000437813 A2MP01023 1474 aa23.17■■□□□ 1.3
TNFRSF1A-203ENST00000437813 UHRF1BP1Q6BDS2 1440 aa23.17■■□□□ 1.3
TNFRSF1A-203ENST00000437813 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
TNFRSF1A-203ENST00000437813 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
TNFRSF1A-203ENST00000437813 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.29
TNFRSF1A-203ENST00000437813 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
TNFRSF1A-203ENST00000437813 RTEL1-TNFRSF6BF6WH68 1400 aa23.13■■□□□ 1.29
TNFRSF1A-203ENST00000437813 NPATQ14207 1427 aa23.12■■□□□ 1.29
TNFRSF1A-203ENST00000437813 CAMSAP2Q08AD1 1489 aa23.1■■□□□ 1.29
TNFRSF1A-203ENST00000437813 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
TNFRSF1A-203ENST00000437813 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-203ENST00000437813 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.29
TNFRSF1A-203ENST00000437813 MAP3K1Q13233 1512 aa23.08■■□□□ 1.28
TNFRSF1A-203ENST00000437813 CCDC141Q6ZP82 1450 aa23.06■■□□□ 1.28
TNFRSF1A-203ENST00000437813 ESF1Q9H501 851 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1A-203ENST00000437813 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
TNFRSF1A-203ENST00000437813 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
TNFRSF1A-203ENST00000437813 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1A-203ENST00000437813 PTPRTO14522 1441 aa23.03■■□□□ 1.28
TNFRSF1A-203ENST00000437813 NCOA1Q15788 1441 aa23.03■■□□□ 1.28
TNFRSF1A-203ENST00000437813 CERKQ8TCT0 537 aa23.02■■□□□ 1.28
TNFRSF1A-203ENST00000437813 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
TNFRSF1A-203ENST00000437813 ZNF142P52746 1687 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF1A-203ENST00000437813 MYO3AQ8NEV4 1616 aa23■■□□□ 1.27
TNFRSF1A-203ENST00000437813 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
TNFRSF1A-203ENST00000437813 RSPH4AQ5TD94 716 aa22.99■■□□□ 1.27
TNFRSF1A-203ENST00000437813 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
TNFRSF1A-203ENST00000437813 GGT6Q6P531 493 aa22.97■■□□□ 1.27
TNFRSF1A-203ENST00000437813 FAM135AQ9P2D6 1515 aa22.97■■□□□ 1.27
TNFRSF1A-203ENST00000437813 CAMSAP1Q5T5Y3 1602 aa22.96■■□□□ 1.27
TNFRSF1A-203ENST00000437813 MAST1Q9Y2H9 1570 aa22.95■■□□□ 1.26
TNFRSF1A-203ENST00000437813 LTBP4Q8N2S1 1624 aa22.94■■□□□ 1.26
TNFRSF1A-203ENST00000437813 CEP170BQ9Y4F5 1589 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF1A-203ENST00000437813 MIA2Q96PC5 1412 aa22.92■■□□□ 1.26
TNFRSF1A-203ENST00000437813 PLA2R1Q13018 1463 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms