RNA–Protein interactions for RNA: ENST00000437806.1

NCDN-205, Transcript of neurochondrin, humanhuman

TSL 2

Gene NCDN, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-205ENST00000437806 SCAPERQ9BY12 1400 aa23.52■■□□□ 1.36
NCDN-205ENST00000437806 EFCAB2Q5VUJ9 269 aa23.52■■□□□ 1.36
NCDN-205ENST00000437806 CLIP1P30622 1438 aa23.51■■□□□ 1.35
NCDN-205ENST00000437806 TROQ12816 1431 aaPredicted RBP23.5■■□□□ 1.35
NCDN-205ENST00000437806 YEATS2Q9ULM3 1422 aa23.48■■□□□ 1.35
NCDN-205ENST00000437806 RIMS1Q86UR5 1692 aaKnown RBP23.47■■□□□ 1.35
NCDN-205ENST00000437806 PCF11O94913 1555 aaKnown RBP23.45■■□□□ 1.34
NCDN-205ENST00000437806 CCDC18Q5T9S5 1454 aa23.45■■□□□ 1.34
NCDN-205ENST00000437806 LRRIQ1Q96JM4 1722 aa23.44■■□□□ 1.34
NCDN-205ENST00000437806 ZNF518AQ6AHZ1 1483 aa23.43■■□□□ 1.34
NCDN-205ENST00000437806 ARHGAP5Q13017 1502 aa23.43■■□□□ 1.34
NCDN-205ENST00000437806 CASKIN1Q8WXD9 1431 aa23.42■■□□□ 1.34
NCDN-205ENST00000437806 ATP10AO60312 1499 aa23.42■■□□□ 1.34
NCDN-205ENST00000437806 SIGLEC1Q9BZZ2 1709 aa23.4■■□□□ 1.34
NCDN-205ENST00000437806 LMTK3Q96Q04 1460 aa23.4■■□□□ 1.34
NCDN-205ENST00000437806 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
NCDN-205ENST00000437806 KDM5CP41229 1560 aa23.38■■□□□ 1.33
NCDN-205ENST00000437806 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
NCDN-205ENST00000437806 FYCO1Q9BQS8 1478 aa23.36■■□□□ 1.33
NCDN-205ENST00000437806 ARHGEF12Q9NZN5 1544 aa23.34■■□□□ 1.33
NCDN-205ENST00000437806 PREX2Q70Z35 1606 aa23.34■■□□□ 1.33
NCDN-205ENST00000437806 CDC42BPBQ9Y5S2 1711 aa23.34■■□□□ 1.33
NCDN-205ENST00000437806 MLECQ14165 292 aa23.32■■□□□ 1.32
NCDN-205ENST00000437806 AFAP1Q8N556 730 aa23.3■■□□□ 1.32
NCDN-205ENST00000437806 REREQ9P2R6 1566 aa23.3■■□□□ 1.32
NCDN-205ENST00000437806 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
NCDN-205ENST00000437806 ABCC1P33527 1531 aa23.28■■□□□ 1.32
NCDN-205ENST00000437806 DIP2CQ9Y2E4 1556 aa23.27■■□□□ 1.32
NCDN-205ENST00000437806 FBXO41Q8TF61 875 aa23.26■■□□□ 1.31
NCDN-205ENST00000437806 MYT1LQ9UL68 1186 aa23.26■■□□□ 1.31
NCDN-205ENST00000437806 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
NCDN-205ENST00000437806 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
NCDN-205ENST00000437806 CDC42BPAQ5VT25 1732 aa23.24■■□□□ 1.31
NCDN-205ENST00000437806 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
NCDN-205ENST00000437806 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
NCDN-205ENST00000437806 AGLP35573 1532 aa23.21■■□□□ 1.31
NCDN-205ENST00000437806 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
NCDN-205ENST00000437806 HSPA2P54652 639 aa23.2■■□□□ 1.3
NCDN-205ENST00000437806 KIDINS220Q9ULH0 1771 aa23.15■■□□□ 1.3
NCDN-205ENST00000437806 GPATCH8Q9UKJ3 1502 aaKnown RBP23.15■■□□□ 1.3
NCDN-205ENST00000437806 SAMD9LQ8IVG5 1584 aa23.14■■□□□ 1.29
NCDN-205ENST00000437806 PLEKHH2Q8IVE3 1493 aa23.13■■□□□ 1.29
NCDN-205ENST00000437806 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
NCDN-205ENST00000437806 UHRF1BP1Q6BDS2 1440 aa23.11■■□□□ 1.29
NCDN-205ENST00000437806 KIAA1107Q9UPP5 1409 aa23.11■■□□□ 1.29
NCDN-205ENST00000437806 CEBPAP49715 358 aaPredicted RBP23.11■■□□□ 1.29
NCDN-205ENST00000437806 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
NCDN-205ENST00000437806 SYCP2Q9BX26 1530 aa23.11■■□□□ 1.29
NCDN-205ENST00000437806 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
NCDN-205ENST00000437806 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
NCDN-205ENST00000437806 CCNB3Q8WWL7 1395 aa23.09■■□□□ 1.29
NCDN-205ENST00000437806 SETD1BQ9UPS6 1966 aaKnown RBP23.09■■□□□ 1.29
NCDN-205ENST00000437806 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
NCDN-205ENST00000437806 C3P01024 1663 aa23.08■■□□□ 1.29
NCDN-205ENST00000437806 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
NCDN-205ENST00000437806 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
NCDN-205ENST00000437806 ATP7AQ04656 1500 aa23.04■■□□□ 1.28
NCDN-205ENST00000437806 EHBP1L1Q8N3D4 1523 aa23.04■■□□□ 1.28
NCDN-205ENST00000437806 HNRNPMP52272 730 aaKnown RBP eCLIP23.04■■□□□ 1.28
NCDN-205ENST00000437806 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
NCDN-205ENST00000437806 INO80Q9ULG1 1556 aaPredicted RBP23.02■■□□□ 1.28
NCDN-205ENST00000437806 CERKQ8TCT0 537 aa23■■□□□ 1.27
NCDN-205ENST00000437806 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
NCDN-205ENST00000437806 PLXNC1O60486 1568 aa22.99■■□□□ 1.27
NCDN-205ENST00000437806 TIAM1Q13009 1591 aa22.99■■□□□ 1.27
NCDN-205ENST00000437806 STRCQ7RTU9 1775 aa22.99■■□□□ 1.27
NCDN-205ENST00000437806 NPATQ14207 1427 aa22.98■■□□□ 1.27
NCDN-205ENST00000437806 A2MP01023 1474 aa22.98■■□□□ 1.27
NCDN-205ENST00000437806 SUPT6HQ7KZ85 1726 aaKnown RBP22.97■■□□□ 1.27
NCDN-205ENST00000437806 ADGBQ8N7X0 1667 aa22.95■■□□□ 1.26
NCDN-205ENST00000437806 PTPRTO14522 1441 aa22.93■■□□□ 1.26
NCDN-205ENST00000437806 RTEL1-TNFRSF6BF6WH68 1400 aa22.92■■□□□ 1.26
NCDN-205ENST00000437806 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
NCDN-205ENST00000437806 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
NCDN-205ENST00000437806 MBD5Q9P267 1494 aa22.92■■□□□ 1.26
NCDN-205ENST00000437806 CLTCQ00610 1675 aaKnown RBP22.89■■□□□ 1.25
NCDN-205ENST00000437806 ZNF644Q9H582 1327 aaPredicted RBP22.87■■□□□ 1.25
NCDN-205ENST00000437806 NCOA1Q15788 1441 aa22.87■■□□□ 1.25
NCDN-205ENST00000437806 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
NCDN-205ENST00000437806 NCOA2Q15596 1464 aa22.85■■□□□ 1.25
NCDN-205ENST00000437806 GGT6Q6P531 493 aa22.85■■□□□ 1.25
NCDN-205ENST00000437806 CCDC141Q6ZP82 1450 aa22.84■■□□□ 1.25
NCDN-205ENST00000437806 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.25
NCDN-205ENST00000437806 ZNF142P52746 1687 aaPredicted RBP22.83■■□□□ 1.24
NCDN-205ENST00000437806 CAMSAP1Q5T5Y3 1602 aa22.82■■□□□ 1.24
NCDN-205ENST00000437806 CAMSAP2Q08AD1 1489 aa22.81■■□□□ 1.24
NCDN-205ENST00000437806 MYO3AQ8NEV4 1616 aa22.81■■□□□ 1.24
NCDN-205ENST00000437806 FAM135AQ9P2D6 1515 aa22.81■■□□□ 1.24
NCDN-205ENST00000437806 PTPRKQ15262 1439 aa22.81■■□□□ 1.24
NCDN-205ENST00000437806 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
NCDN-205ENST00000437806 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
NCDN-205ENST00000437806 ARHGEF5Q12774 1597 aa22.77■■□□□ 1.24
NCDN-205ENST00000437806 CEP170BQ9Y4F5 1589 aaPredicted RBP22.77■■□□□ 1.24
NCDN-205ENST00000437806 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.24
NCDN-205ENST00000437806 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
NCDN-205ENST00000437806 PKD2Q13563 968 aa22.75■■□□□ 1.23
NCDN-205ENST00000437806 LTBP4Q8N2S1 1624 aa22.75■■□□□ 1.23
NCDN-205ENST00000437806 MAP3K1Q13233 1512 aa22.74■■□□□ 1.23
NCDN-205ENST00000437806 TSPY4P0CV99 314 aa22.73■■□□□ 1.23
NCDN-205ENST00000437806 TSPY10P0CW01 314 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms