RNA–Protein interactions for RNA: ENST00000437806.1

NCDN-205, Transcript of neurochondrin, humanhuman

TSL 2

Gene NCDN, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-205ENST00000437806 NISCHQ9Y2I1 1504 aa35.89■■■■□ 3.34
NCDN-205ENST00000437806 CCDC180Q9P1Z9 1646 aa32.28■■■□□ 2.76
NCDN-205ENST00000437806 ABCC9O60706 1549 aa32.13■■■□□ 2.73
NCDN-205ENST00000437806 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
NCDN-205ENST00000437806 NACADO15069 1562 aa30.5■■■□□ 2.47
NCDN-205ENST00000437806 DCAF8L2P0C7V8 631 aa30.19■■■□□ 2.42
NCDN-205ENST00000437806 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
NCDN-205ENST00000437806 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
NCDN-205ENST00000437806 UNC13AQ9UPW8 1703 aa29.92■■■□□ 2.38
NCDN-205ENST00000437806 PABPN1Q86U42 306 aaKnown RBP eCLIP29.87■■■□□ 2.37
NCDN-205ENST00000437806 ZCCHC6Q5VYS8 1495 aaKnown RBP29.75■■■□□ 2.35
NCDN-205ENST00000437806 DCAF1Q9Y4B6 1507 aa29.73■■■□□ 2.35
NCDN-205ENST00000437806 BICRAQ9NZM4 1560 aa29.73■■■□□ 2.35
NCDN-205ENST00000437806 SHROOM4Q9ULL8 1493 aa29.49■■■□□ 2.31
NCDN-205ENST00000437806 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
NCDN-205ENST00000437806 CC2D2AQ9P2K1 1620 aa29.07■■■□□ 2.24
NCDN-205ENST00000437806 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
NCDN-205ENST00000437806 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
NCDN-205ENST00000437806 NCAPD3P42695 1498 aa28.14■■■□□ 2.09
NCDN-205ENST00000437806 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
NCDN-205ENST00000437806 SMARCA4P51532 1647 aa28■■■□□ 2.07
NCDN-205ENST00000437806 SMARCA2P51531 1590 aa28■■■□□ 2.07
NCDN-205ENST00000437806 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
NCDN-205ENST00000437806 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
NCDN-205ENST00000437806 CUX2O14529 1486 aa27.8■■■□□ 2.04
NCDN-205ENST00000437806 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
NCDN-205ENST00000437806 PEG3Q9GZU2 1588 aa27.78■■■□□ 2.04
NCDN-205ENST00000437806 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
NCDN-205ENST00000437806 DNAJC5Q9H3Z4 198 aa27.7■■■□□ 2.02
NCDN-205ENST00000437806 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
NCDN-205ENST00000437806 NESP48681 1621 aa27.58■■■□□ 2.01
NCDN-205ENST00000437806 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
NCDN-205ENST00000437806 THOC2Q8NI27 1593 aaKnown RBP27.38■■□□□ 1.97
NCDN-205ENST00000437806 PDS5BQ9NTI5 1447 aa27.36■■□□□ 1.97
NCDN-205ENST00000437806 WIZO95785 1651 aa27.27■■□□□ 1.96
NCDN-205ENST00000437806 KIF21AQ7Z4S6 1674 aa27.27■■□□□ 1.96
NCDN-205ENST00000437806 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
NCDN-205ENST00000437806 MRC2Q9UBG0 1479 aa27.09■■□□□ 1.93
NCDN-205ENST00000437806 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
NCDN-205ENST00000437806 WDR62O43379 1518 aa27.03■■□□□ 1.92
NCDN-205ENST00000437806 TOP2AP11388 1531 aaKnown RBP27■■□□□ 1.91
NCDN-205ENST00000437806 CEP164Q9UPV0 1460 aa26.99■■□□□ 1.91
NCDN-205ENST00000437806 CFTRP13569 1480 aa26.96■■□□□ 1.91
NCDN-205ENST00000437806 FANCD2Q9BXW9 1451 aa26.93■■□□□ 1.9
NCDN-205ENST00000437806 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
NCDN-205ENST00000437806 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
NCDN-205ENST00000437806 CCDC88BA6NC98 1476 aa26.65■■□□□ 1.86
NCDN-205ENST00000437806 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
NCDN-205ENST00000437806 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
NCDN-205ENST00000437806 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
NCDN-205ENST00000437806 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
NCDN-205ENST00000437806 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
NCDN-205ENST00000437806 DNMBPQ6XZF7 1577 aa26.36■■□□□ 1.81
NCDN-205ENST00000437806 ZNF608Q9ULD9 1512 aaPredicted RBP26.33■■□□□ 1.81
NCDN-205ENST00000437806 EIF4G3O43432 1585 aaKnown RBP26.24■■□□□ 1.79
NCDN-205ENST00000437806 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
NCDN-205ENST00000437806 POLA1P09884 1462 aaPredicted RBP26.16■■□□□ 1.78
NCDN-205ENST00000437806 RIMBP3CA6NJZ7 1639 aa26.11■■□□□ 1.77
NCDN-205ENST00000437806 RIMBP3BA6NNM3 1639 aa26.11■■□□□ 1.77
NCDN-205ENST00000437806 RIMBP3Q9UFD9 1639 aa26.11■■□□□ 1.77
NCDN-205ENST00000437806 AQRO60306 1485 aaKnown RBP eCLIP26.1■■□□□ 1.772e-6■■■■□ 21.1
NCDN-205ENST00000437806 SOGA1O94964 1423 aa26.05■■□□□ 1.76
NCDN-205ENST00000437806 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
NCDN-205ENST00000437806 WDR97A6NE52 1622 aa26.04■■□□□ 1.76
NCDN-205ENST00000437806 CHD1O14646 1710 aa26.02■■□□□ 1.76
NCDN-205ENST00000437806 RAD54L2Q9Y4B4 1467 aa26■■□□□ 1.75
NCDN-205ENST00000437806 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
NCDN-205ENST00000437806 CUX1P39880 1505 aa25.94■■□□□ 1.74
NCDN-205ENST00000437806 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
NCDN-205ENST00000437806 FBLN2P98095 1184 aa25.93■■□□□ 1.74
NCDN-205ENST00000437806 SNAPC4Q5SXM2 1469 aa25.86■■□□□ 1.73
NCDN-205ENST00000437806 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
NCDN-205ENST00000437806 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
NCDN-205ENST00000437806 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
NCDN-205ENST00000437806 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
NCDN-205ENST00000437806 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
NCDN-205ENST00000437806 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
NCDN-205ENST00000437806 ARAP1Q96P48 1450 aa25.77■■□□□ 1.72
NCDN-205ENST00000437806 SYNJ2O15056 1496 aa25.76■■□□□ 1.71
NCDN-205ENST00000437806 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
NCDN-205ENST00000437806 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
NCDN-205ENST00000437806 GAPVD1Q14C86 1478 aa25.73■■□□□ 1.71
NCDN-205ENST00000437806 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
NCDN-205ENST00000437806 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
NCDN-205ENST00000437806 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
NCDN-205ENST00000437806 BIVM-ERCC5R4GMW8 1640 aa25.59■■□□□ 1.69
NCDN-205ENST00000437806 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
NCDN-205ENST00000437806 TRHP20396 242 aaPredicted RBP25.53■■□□□ 1.68
NCDN-205ENST00000437806 GRIN2AQ12879 1464 aa25.49■■□□□ 1.67
NCDN-205ENST00000437806 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
NCDN-205ENST00000437806 ERICH3Q5RHP9 1530 aa25.43■■□□□ 1.66
NCDN-205ENST00000437806 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
NCDN-205ENST00000437806 NUP160Q12769 1436 aa25.41■■□□□ 1.66
NCDN-205ENST00000437806 CEP170Q5SW79 1584 aa25.37■■□□□ 1.65
NCDN-205ENST00000437806 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
NCDN-205ENST00000437806 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
NCDN-205ENST00000437806 PRG4Q92954 1404 aaPredicted RBP25.14■■□□□ 1.62
NCDN-205ENST00000437806 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
NCDN-205ENST00000437806 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
NCDN-205ENST00000437806 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms