RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 PDE4AP27815 886 aa9.2□□□□□ -0.94
NCL-204ENST00000436894 E2F4Q16254 413 aa9.2□□□□□ -0.94
NCL-204ENST00000436894 MFSD10Q14728 455 aa9.18□□□□□ -0.94
NCL-204ENST00000436894 MICALL2Q8IY33 904 aa9.18□□□□□ -0.94
NCL-204ENST00000436894 CC2D2AQ9P2K1 1620 aa9.18□□□□□ -0.94
NCL-204ENST00000436894 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
NCL-204ENST00000436894 OCEL1Q9H607 264 aa9.16□□□□□ -0.94
NCL-204ENST00000436894 COLQQ9Y215 455 aaPredicted RBP9.15□□□□□ -0.94
NCL-204ENST00000436894 IER5LQ5T953 404 aa9.14□□□□□ -0.95
NCL-204ENST00000436894 DCBLD2Q96PD2 775 aa9.14□□□□□ -0.95
NCL-204ENST00000436894 ARHGEF1Q92888 912 aaKnown RBP9.13□□□□□ -0.95
NCL-204ENST00000436894 GPHNQ9NQX3 736 aaPredicted RBP9.13□□□□□ -0.95
NCL-204ENST00000436894 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
NCL-204ENST00000436894 DCAF1Q9Y4B6 1507 aa9.12□□□□□ -0.95
NCL-204ENST00000436894 SEMA3EO15041 775 aa9.12□□□□□ -0.95
NCL-204ENST00000436894 POTEIP0CG38 1075 aa9.12□□□□□ -0.95
NCL-204ENST00000436894 PLCG2P16885 1265 aa9.12□□□□□ -0.95
NCL-204ENST00000436894 EIF4G1Q04637 1599 aaKnown RBP9.12□□□□□ -0.95
NCL-204ENST00000436894 POTEFA5A3E0 1075 aa9.11□□□□□ -0.95
NCL-204ENST00000436894 DSG2Q14126 1118 aa9.11□□□□□ -0.95
NCL-204ENST00000436894 PPP1R15BQ5SWA1 713 aa9.11□□□□□ -0.95
NCL-204ENST00000436894 TMEM121BQ9BXQ6 578 aaPredicted RBP9.11□□□□□ -0.95
NCL-204ENST00000436894 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
NCL-204ENST00000436894 SEC24BO95487 1268 aa9.08□□□□□ -0.96
NCL-204ENST00000436894 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
NCL-204ENST00000436894 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
NCL-204ENST00000436894 LMOD2Q6P5Q4 547 aa9.07□□□□□ -0.96
NCL-204ENST00000436894 TMEM92Q6UXU6 159 aa9.07□□□□□ -0.96
NCL-204ENST00000436894 TMC2Q8TDI7 906 aa9.07□□□□□ -0.96
NCL-204ENST00000436894 EMILIN3Q9NT22 766 aa9.07□□□□□ -0.96
NCL-204ENST00000436894 TESPA1A2RU30 521 aaPredicted RBP9.05□□□□□ -0.96
NCL-204ENST00000436894 KIF3CO14782 793 aa9.05□□□□□ -0.96
NCL-204ENST00000436894 METRNQ9UJH8 293 aa9.05□□□□□ -0.96
NCL-204ENST00000436894 ZCCHC6Q5VYS8 1495 aaKnown RBP9.04□□□□□ -0.96
NCL-204ENST00000436894 G3V3G9 751 aa9.04□□□□□ -0.96
NCL-204ENST00000436894 FOXK1P85037 733 aa9.04□□□□□ -0.96
NCL-204ENST00000436894 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
NCL-204ENST00000436894 DPYSL4O14531 572 aa9.03□□□□□ -0.96
NCL-204ENST00000436894 PLPP6Q8IY26 295 aa9.03□□□□□ -0.96
NCL-204ENST00000436894 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
NCL-204ENST00000436894 C7P10643 843 aa9.02□□□□□ -0.97
NCL-204ENST00000436894 L3MBTL3Q96JM7 780 aaPredicted RBP9.02□□□□□ -0.97
NCL-204ENST00000436894 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
NCL-204ENST00000436894 SCRIBQ14160 1630 aa9.01□□□□□ -0.97
NCL-204ENST00000436894 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.98
NCL-204ENST00000436894 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
NCL-204ENST00000436894 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
NCL-204ENST00000436894 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
NCL-204ENST00000436894 PDIA6Q15084 440 aa8.93□□□□□ -0.98
NCL-204ENST00000436894 C3orf67Q6ZVT6 689 aa8.93□□□□□ -0.98
NCL-204ENST00000436894 CUX2O14529 1486 aa8.93□□□□□ -0.98
NCL-204ENST00000436894 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
NCL-204ENST00000436894 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
NCL-204ENST00000436894 POTEJP0CG39 1038 aa8.89□□□□□ -0.99
NCL-204ENST00000436894 SMYD5Q6GMV2 418 aa8.89□□□□□ -0.99
NCL-204ENST00000436894 SPDYE16A6NNV3 312 aaPredicted RBP8.88□□□□□ -0.99
NCL-204ENST00000436894 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
NCL-204ENST00000436894 GRXCR2A6NFK2 248 aa8.86□□□□□ -0.99
NCL-204ENST00000436894 SLC24A3Q9HC58 644 aa8.86□□□□□ -0.99
NCL-204ENST00000436894 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.85□□□□□ -0.99
NCL-204ENST00000436894 ZMYND10O75800 440 aa8.84□□□□□ -0.99
NCL-204ENST00000436894 LHX8Q68G74 356 aa8.84□□□□□ -0.99
NCL-204ENST00000436894 DDX12PQ92771 950 aa8.84□□□□□ -0.99
NCL-204ENST00000436894 ERCC6Q03468 1493 aa8.83□□□□□ -1
NCL-204ENST00000436894 GPIHBP1Q8IV16 184 aa8.83□□□□□ -1
NCL-204ENST00000436894 EVI5O60447 810 aa8.82□□□□□ -1
NCL-204ENST00000436894 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
NCL-204ENST00000436894 OSBPP22059 807 aa8.81□□□□□ -1
NCL-204ENST00000436894 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
NCL-204ENST00000436894 NCAPD3P42695 1498 aa8.79□□□□□ -1
NCL-204ENST00000436894 GPR37O15354 613 aa8.79□□□□□ -1
NCL-204ENST00000436894 TBC1D12O60347 775 aa8.79□□□□□ -1
NCL-204ENST00000436894 BARGINQ6ZT62 677 aa8.79□□□□□ -1
NCL-204ENST00000436894 SLC34A2O95436 690 aa8.78□□□□□ -1
NCL-204ENST00000436894 PTGER2P43116 358 aa8.77□□□□□ -1.01
NCL-204ENST00000436894 BRPF1P55201 1214 aaPredicted RBP8.77□□□□□ -1.01
NCL-204ENST00000436894 NUTM2FA1L443 756 aa8.76□□□□□ -1.01
NCL-204ENST00000436894 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
NCL-204ENST00000436894 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.01
NCL-204ENST00000436894 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
NCL-204ENST00000436894 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
NCL-204ENST00000436894 SLAIN1Q8ND83 568 aa8.73□□□□□ -1.01
NCL-204ENST00000436894 HOXB3P14651 431 aaPredicted RBP8.72□□□□□ -1.01
NCL-204ENST00000436894 FECHP22830 423 aa8.72□□□□□ -1.01
NCL-204ENST00000436894 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
NCL-204ENST00000436894 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
NCL-204ENST00000436894 ARSIQ5FYB1 569 aa8.7□□□□□ -1.02
NCL-204ENST00000436894 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
NCL-204ENST00000436894 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
NCL-204ENST00000436894 ATAD2BQ9ULI0 1458 aa8.7□□□□□ -1.02
NCL-204ENST00000436894 SMARCA2P51531 1590 aa8.69□□□□□ -1.02
NCL-204ENST00000436894 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
NCL-204ENST00000436894 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
NCL-204ENST00000436894 HMGXB3Q12766 1538 aa8.69□□□□□ -1.02
NCL-204ENST00000436894 NUDT7P0C024 238 aa8.68□□□□□ -1.02
NCL-204ENST00000436894 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
NCL-204ENST00000436894 AK7Q96M32 723 aa8.68□□□□□ -1.02
NCL-204ENST00000436894 SCUBE2Q9NQ36 999 aa8.68□□□□□ -1.02
NCL-204ENST00000436894 PHF14O94880 888 aa8.67□□□□□ -1.02
NCL-204ENST00000436894 EN1Q05925 392 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms