RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
SNHG20-202ENST00000434411 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
SNHG20-202ENST00000434411 TTC37Q6PGP7 1564 aa17.99■□□□□ 0.47
SNHG20-202ENST00000434411 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
SNHG20-202ENST00000434411 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
SNHG20-202ENST00000434411 MYO5CQ9NQX4 1742 aa17.96■□□□□ 0.47
SNHG20-202ENST00000434411 KIF14Q15058 1648 aa17.96■□□□□ 0.47
SNHG20-202ENST00000434411 FYCO1Q9BQS8 1478 aa17.95■□□□□ 0.46
SNHG20-202ENST00000434411 FANCAO15360 1455 aa17.95■□□□□ 0.46
SNHG20-202ENST00000434411 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
SNHG20-202ENST00000434411 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
SNHG20-202ENST00000434411 PLCH2O75038 1416 aa17.91■□□□□ 0.46
SNHG20-202ENST00000434411 KDM4FA0A1W2PPD8 638 aa17.9■□□□□ 0.46
SNHG20-202ENST00000434411 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
SNHG20-202ENST00000434411 PODXL2Q9NZ53 605 aa17.89■□□□□ 0.45
SNHG20-202ENST00000434411 RICTORQ6R327 1708 aa17.89■□□□□ 0.45
SNHG20-202ENST00000434411 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
SNHG20-202ENST00000434411 ADGRL1O94910 1474 aa17.88■□□□□ 0.45
SNHG20-202ENST00000434411 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
SNHG20-202ENST00000434411 EFCAB2Q5VUJ9 269 aa17.85■□□□□ 0.45
SNHG20-202ENST00000434411 ANP32EQ9BTT0 268 aa17.84■□□□□ 0.45
SNHG20-202ENST00000434411 CDC42BPBQ9Y5S2 1711 aa17.84■□□□□ 0.45
SNHG20-202ENST00000434411 ARHGAP5Q13017 1502 aa17.83■□□□□ 0.45
SNHG20-202ENST00000434411 MAP3K1Q13233 1512 aa17.83■□□□□ 0.45
SNHG20-202ENST00000434411 PREX2Q70Z35 1606 aa17.81■□□□□ 0.44
SNHG20-202ENST00000434411 SCAPERQ9BY12 1400 aa17.81■□□□□ 0.44
SNHG20-202ENST00000434411 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
SNHG20-202ENST00000434411 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
SNHG20-202ENST00000434411 ARHGEF40Q8TER5 1519 aa17.78■□□□□ 0.44
SNHG20-202ENST00000434411 TIAM1Q13009 1591 aa17.78■□□□□ 0.44
SNHG20-202ENST00000434411 MAGI2Q86UL8 1455 aa17.77■□□□□ 0.44
SNHG20-202ENST00000434411 POGZQ7Z3K3 1410 aa17.77■□□□□ 0.44
SNHG20-202ENST00000434411 ARXQ96QS3 562 aa17.77■□□□□ 0.43
SNHG20-202ENST00000434411 MTUS2Q5JR59 1369 aa17.76■□□□□ 0.43
SNHG20-202ENST00000434411 ZFYVE16Q7Z3T8 1539 aa17.75■□□□□ 0.43
SNHG20-202ENST00000434411 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
SNHG20-202ENST00000434411 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
SNHG20-202ENST00000434411 ZNF518AQ6AHZ1 1483 aa17.74■□□□□ 0.43
SNHG20-202ENST00000434411 ARID4BQ4LE39 1312 aaPredicted RBP17.74■□□□□ 0.43
SNHG20-202ENST00000434411 BCORL1Q5H9F3 1711 aa17.73■□□□□ 0.43
SNHG20-202ENST00000434411 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
SNHG20-202ENST00000434411 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
SNHG20-202ENST00000434411 ITSN2Q9NZM3 1697 aa17.72■□□□□ 0.43
SNHG20-202ENST00000434411 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
SNHG20-202ENST00000434411 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.42
SNHG20-202ENST00000434411 ABCC1P33527 1531 aa17.7■□□□□ 0.42
SNHG20-202ENST00000434411 KDM5CP41229 1560 aa17.69■□□□□ 0.42
SNHG20-202ENST00000434411 YEATS2Q9ULM3 1422 aa17.69■□□□□ 0.42
SNHG20-202ENST00000434411 GPATCH8Q9UKJ3 1502 aaKnown RBP17.69■□□□□ 0.42
SNHG20-202ENST00000434411 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
SNHG20-202ENST00000434411 KANK4Q5T7N3 995 aaPredicted RBP17.68■□□□□ 0.42
SNHG20-202ENST00000434411 MYT1LQ9UL68 1186 aa17.68■□□□□ 0.42
SNHG20-202ENST00000434411 HECW2Q9P2P5 1572 aa17.68■□□□□ 0.42
SNHG20-202ENST00000434411 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
SNHG20-202ENST00000434411 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
SNHG20-202ENST00000434411 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
SNHG20-202ENST00000434411 ATP10AO60312 1499 aa17.67■□□□□ 0.42
SNHG20-202ENST00000434411 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
SNHG20-202ENST00000434411 LRRC9Q6ZRR7 1453 aa17.66■□□□□ 0.42
SNHG20-202ENST00000434411 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
SNHG20-202ENST00000434411 ACIN1Q9UKV3 1341 aaKnown RBP17.66■□□□□ 0.42
SNHG20-202ENST00000434411 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
SNHG20-202ENST00000434411 MADDQ8WXG6 1647 aa17.64■□□□□ 0.41
SNHG20-202ENST00000434411 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
SNHG20-202ENST00000434411 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
SNHG20-202ENST00000434411 C9orf84Q5VXU9 1444 aa17.64■□□□□ 0.41
SNHG20-202ENST00000434411 PLEKHH2Q8IVE3 1493 aa17.63■□□□□ 0.41
SNHG20-202ENST00000434411 TRAPPC8Q9Y2L5 1435 aa17.63■□□□□ 0.41
SNHG20-202ENST00000434411 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
SNHG20-202ENST00000434411 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
SNHG20-202ENST00000434411 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
SNHG20-202ENST00000434411 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
SNHG20-202ENST00000434411 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
SNHG20-202ENST00000434411 PTPRMP28827 1452 aa17.61■□□□□ 0.41
SNHG20-202ENST00000434411 DIP2CQ9Y2E4 1556 aa17.6■□□□□ 0.41
SNHG20-202ENST00000434411 KIAA1107Q9UPP5 1409 aa17.6■□□□□ 0.41
SNHG20-202ENST00000434411 FER1L4A9Z1Z3 1794 aa17.6■□□□□ 0.41
SNHG20-202ENST00000434411 KIDINS220Q9ULH0 1771 aa17.6■□□□□ 0.41
SNHG20-202ENST00000434411 ABCA6Q8N139 1617 aa17.59■□□□□ 0.41
SNHG20-202ENST00000434411 PKNOX2Q96KN3 472 aa17.59■□□□□ 0.41
SNHG20-202ENST00000434411 NCOA2Q15596 1464 aa17.59■□□□□ 0.41
SNHG20-202ENST00000434411 HNRNPMP52272 730 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNHG20-202ENST00000434411 REREQ9P2R6 1566 aa17.58■□□□□ 0.41
SNHG20-202ENST00000434411 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
SNHG20-202ENST00000434411 MLECQ14165 292 aa17.57■□□□□ 0.4
SNHG20-202ENST00000434411 SPAG9O60271 1321 aaKnown RBP17.55■□□□□ 0.4
SNHG20-202ENST00000434411 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
SNHG20-202ENST00000434411 ATP7AQ04656 1500 aa17.53■□□□□ 0.4
SNHG20-202ENST00000434411 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
SNHG20-202ENST00000434411 INO80Q9ULG1 1556 aaPredicted RBP17.51■□□□□ 0.39
SNHG20-202ENST00000434411 AGLP35573 1532 aa17.51■□□□□ 0.39
SNHG20-202ENST00000434411 ZNF644Q9H582 1327 aaPredicted RBP17.51■□□□□ 0.39
SNHG20-202ENST00000434411 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
SNHG20-202ENST00000434411 ADGBQ8N7X0 1667 aa17.49■□□□□ 0.39
SNHG20-202ENST00000434411 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
SNHG20-202ENST00000434411 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
SNHG20-202ENST00000434411 MBD5Q9P267 1494 aa17.48■□□□□ 0.39
SNHG20-202ENST00000434411 ESF1Q9H501 851 aaKnown RBP17.46■□□□□ 0.39
SNHG20-202ENST00000434411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNHG20-202ENST00000434411 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms