RNA–Protein interactions for RNA: ENST00000434013.6

NPC2-202, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-202ENST00000434013 AKNAQ7Z591 1439 aa17.34■□□□□ 0.37
NPC2-202ENST00000434013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
NPC2-202ENST00000434013 TTC37Q6PGP7 1564 aa17.33■□□□□ 0.37
NPC2-202ENST00000434013 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
NPC2-202ENST00000434013 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
NPC2-202ENST00000434013 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
NPC2-202ENST00000434013 PLCH2O75038 1416 aa17.29■□□□□ 0.36
NPC2-202ENST00000434013 POGZQ7Z3K3 1410 aa17.29■□□□□ 0.36
NPC2-202ENST00000434013 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
NPC2-202ENST00000434013 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.36
NPC2-202ENST00000434013 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
NPC2-202ENST00000434013 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
NPC2-202ENST00000434013 RICTORQ6R327 1708 aa17.26■□□□□ 0.35
NPC2-202ENST00000434013 FBXO41Q8TF61 875 aa17.25■□□□□ 0.35
NPC2-202ENST00000434013 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
NPC2-202ENST00000434013 MADDQ8WXG6 1647 aa17.23■□□□□ 0.35
NPC2-202ENST00000434013 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
NPC2-202ENST00000434013 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
NPC2-202ENST00000434013 APLP2Q06481 763 aa17.22■□□□□ 0.35
NPC2-202ENST00000434013 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
NPC2-202ENST00000434013 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.34
NPC2-202ENST00000434013 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
NPC2-202ENST00000434013 YEATS2Q9ULM3 1422 aa17.2■□□□□ 0.34
NPC2-202ENST00000434013 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
NPC2-202ENST00000434013 SUPT6HQ7KZ85 1726 aaKnown RBP17.19■□□□□ 0.34
NPC2-202ENST00000434013 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
NPC2-202ENST00000434013 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
NPC2-202ENST00000434013 ATP10AO60312 1499 aa17.16■□□□□ 0.34
NPC2-202ENST00000434013 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
NPC2-202ENST00000434013 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
NPC2-202ENST00000434013 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
NPC2-202ENST00000434013 ZNF518AQ6AHZ1 1483 aa17.15■□□□□ 0.34
NPC2-202ENST00000434013 ARHGEF12Q9NZN5 1544 aa17.15■□□□□ 0.34
NPC2-202ENST00000434013 ITSN2Q9NZM3 1697 aa17.14■□□□□ 0.33
NPC2-202ENST00000434013 NCOA2Q15596 1464 aa17.14■□□□□ 0.33
NPC2-202ENST00000434013 GPATCH8Q9UKJ3 1502 aaKnown RBP17.14■□□□□ 0.33
NPC2-202ENST00000434013 KDM5CP41229 1560 aa17.12■□□□□ 0.33
NPC2-202ENST00000434013 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
NPC2-202ENST00000434013 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
NPC2-202ENST00000434013 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
NPC2-202ENST00000434013 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
NPC2-202ENST00000434013 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
NPC2-202ENST00000434013 ABCC1P33527 1531 aa17.09■□□□□ 0.33
NPC2-202ENST00000434013 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
NPC2-202ENST00000434013 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
NPC2-202ENST00000434013 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
NPC2-202ENST00000434013 AGLP35573 1532 aa17.05■□□□□ 0.32
NPC2-202ENST00000434013 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
NPC2-202ENST00000434013 SYCP2Q9BX26 1530 aa17.04■□□□□ 0.32
NPC2-202ENST00000434013 HSPA2P54652 639 aa17.02■□□□□ 0.32
NPC2-202ENST00000434013 AFAP1Q8N556 730 aa17.01■□□□□ 0.31
NPC2-202ENST00000434013 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
NPC2-202ENST00000434013 CAMSAP2Q08AD1 1489 aa17■□□□□ 0.31
NPC2-202ENST00000434013 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
NPC2-202ENST00000434013 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
NPC2-202ENST00000434013 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
NPC2-202ENST00000434013 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
NPC2-202ENST00000434013 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
NPC2-202ENST00000434013 MLECQ14165 292 aa16.98■□□□□ 0.31
NPC2-202ENST00000434013 ZNF644Q9H582 1327 aaPredicted RBP16.97■□□□□ 0.31
NPC2-202ENST00000434013 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
NPC2-202ENST00000434013 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
NPC2-202ENST00000434013 CNTLNQ9NXG0 1405 aa16.97■□□□□ 0.31
NPC2-202ENST00000434013 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
NPC2-202ENST00000434013 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
NPC2-202ENST00000434013 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
NPC2-202ENST00000434013 PREX1Q8TCU6 1659 aa16.95■□□□□ 0.3
NPC2-202ENST00000434013 PTPRTO14522 1441 aa16.93■□□□□ 0.3
NPC2-202ENST00000434013 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
NPC2-202ENST00000434013 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
NPC2-202ENST00000434013 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
NPC2-202ENST00000434013 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
NPC2-202ENST00000434013 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
NPC2-202ENST00000434013 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
NPC2-202ENST00000434013 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
NPC2-202ENST00000434013 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
NPC2-202ENST00000434013 NPATQ14207 1427 aa16.91■□□□□ 0.3
NPC2-202ENST00000434013 KIDINS220Q9ULH0 1771 aa16.9■□□□□ 0.3
NPC2-202ENST00000434013 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
NPC2-202ENST00000434013 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
NPC2-202ENST00000434013 INO80Q9ULG1 1556 aaPredicted RBP16.89■□□□□ 0.3
NPC2-202ENST00000434013 RSPH4AQ5TD94 716 aa16.88■□□□□ 0.29
NPC2-202ENST00000434013 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
NPC2-202ENST00000434013 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
NPC2-202ENST00000434013 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
NPC2-202ENST00000434013 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
NPC2-202ENST00000434013 PPP6R1Q9UPN7 881 aa16.85■□□□□ 0.29
NPC2-202ENST00000434013 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
NPC2-202ENST00000434013 RTEL1-TNFRSF6BF6WH68 1400 aa16.84■□□□□ 0.29
NPC2-202ENST00000434013 NCOA1Q15788 1441 aa16.84■□□□□ 0.29
NPC2-202ENST00000434013 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
NPC2-202ENST00000434013 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
NPC2-202ENST00000434013 CROCC2H7BZ55 1655 aa16.82■□□□□ 0.28
NPC2-202ENST00000434013 DNMT1P26358 1616 aaKnown RBP16.82■□□□□ 0.28
NPC2-202ENST00000434013 PLXNC1O60486 1568 aa16.82■□□□□ 0.28
NPC2-202ENST00000434013 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
NPC2-202ENST00000434013 ADGBQ8N7X0 1667 aa16.81■□□□□ 0.28
NPC2-202ENST00000434013 MAST1Q9Y2H9 1570 aa16.81■□□□□ 0.28
NPC2-202ENST00000434013 STRCQ7RTU9 1775 aa16.81■□□□□ 0.28
NPC2-202ENST00000434013 C3P01024 1663 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms