RNA–Protein interactions for RNA: ENST00000433927.1

ELL3-202, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 5

Gene ELL3, Length 792 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-202ENST00000433927 ILDR1Q86SU0 546 aaPredicted RBP33.21■■■□□ 2.91
ELL3-202ENST00000433927 KIF14Q15058 1648 aa33.2■■■□□ 2.91
ELL3-202ENST00000433927 TROQ12816 1431 aaPredicted RBP33.2■■■□□ 2.91
ELL3-202ENST00000433927 CLIP1P30622 1438 aa33.19■■■□□ 2.9
ELL3-202ENST00000433927 YEATS2Q9ULM3 1422 aa33.18■■■□□ 2.9
ELL3-202ENST00000433927 LRRIQ1Q96JM4 1722 aa33.14■■■□□ 2.89
ELL3-202ENST00000433927 RIMS1Q86UR5 1692 aaKnown RBP33.13■■■□□ 2.89
ELL3-202ENST00000433927 ARHGAP5Q13017 1502 aa33.1■■■□□ 2.89
ELL3-202ENST00000433927 CASKIN1Q8WXD9 1431 aa33.1■■■□□ 2.89
ELL3-202ENST00000433927 CCDC18Q5T9S5 1454 aa33.08■■■□□ 2.89
ELL3-202ENST00000433927 SIGLEC1Q9BZZ2 1709 aa33.06■■■□□ 2.88
ELL3-202ENST00000433927 PCF11O94913 1555 aaKnown RBP33.05■■■□□ 2.88
ELL3-202ENST00000433927 ATP10AO60312 1499 aa33.05■■■□□ 2.88
ELL3-202ENST00000433927 ZNF518AQ6AHZ1 1483 aa33.05■■■□□ 2.88
ELL3-202ENST00000433927 MLECQ14165 292 aa33.03■■■□□ 2.88
ELL3-202ENST00000433927 C9orf84Q5VXU9 1444 aa33.02■■■□□ 2.88
ELL3-202ENST00000433927 LMTK3Q96Q04 1460 aa32.99■■■□□ 2.87
ELL3-202ENST00000433927 PLPPR3Q6T4P5 718 aa32.98■■■□□ 2.87
ELL3-202ENST00000433927 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
ELL3-202ENST00000433927 CDC42BPBQ9Y5S2 1711 aa32.98■■■□□ 2.87
ELL3-202ENST00000433927 FER1L4A9Z1Z3 1794 aa32.97■■■□□ 2.87
ELL3-202ENST00000433927 MYT1LQ9UL68 1186 aa32.96■■■□□ 2.87
ELL3-202ENST00000433927 FYCO1Q9BQS8 1478 aa32.96■■■□□ 2.87
ELL3-202ENST00000433927 KDM5CP41229 1560 aa32.96■■■□□ 2.87
ELL3-202ENST00000433927 PREX2Q70Z35 1606 aa32.94■■■□□ 2.86
ELL3-202ENST00000433927 ARHGEF12Q9NZN5 1544 aa32.9■■■□□ 2.86
ELL3-202ENST00000433927 ABCC1P33527 1531 aa32.86■■■□□ 2.85
ELL3-202ENST00000433927 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
ELL3-202ENST00000433927 CDC42BPAQ5VT25 1732 aa32.84■■■□□ 2.85
ELL3-202ENST00000433927 DIP2CQ9Y2E4 1556 aa32.83■■■□□ 2.85
ELL3-202ENST00000433927 HSPA2P54652 639 aa32.82■■■□□ 2.84
ELL3-202ENST00000433927 ITSN2Q9NZM3 1697 aa32.82■■■□□ 2.84
ELL3-202ENST00000433927 REREQ9P2R6 1566 aa32.81■■■□□ 2.84
ELL3-202ENST00000433927 TRAPPC8Q9Y2L5 1435 aa32.81■■■□□ 2.84
ELL3-202ENST00000433927 ABCA6Q8N139 1617 aa32.77■■■□□ 2.84
ELL3-202ENST00000433927 FBXO41Q8TF61 875 aa32.76■■■□□ 2.83
ELL3-202ENST00000433927 ZNF777Q9ULD5 760 aaPredicted RBP32.75■■■□□ 2.83
ELL3-202ENST00000433927 CEBPAP49715 358 aaPredicted RBP32.73■■■□□ 2.83
ELL3-202ENST00000433927 GPATCH8Q9UKJ3 1502 aaKnown RBP32.72■■■□□ 2.83
ELL3-202ENST00000433927 AGLP35573 1532 aa32.71■■■□□ 2.83
ELL3-202ENST00000433927 PREX1Q8TCU6 1659 aa32.7■■■□□ 2.83
ELL3-202ENST00000433927 KIDINS220Q9ULH0 1771 aa32.7■■■□□ 2.82
ELL3-202ENST00000433927 ESF1Q9H501 851 aaKnown RBP32.69■■■□□ 2.82
ELL3-202ENST00000433927 SAMD9LQ8IVG5 1584 aa32.68■■■□□ 2.82
ELL3-202ENST00000433927 MTUS2Q5JR59 1369 aa32.68■■■□□ 2.82
ELL3-202ENST00000433927 SETD1BQ9UPS6 1966 aaKnown RBP32.67■■■□□ 2.82
ELL3-202ENST00000433927 CFDP1Q9UEE9 299 aaPredicted RBP32.66■■■□□ 2.82
ELL3-202ENST00000433927 CCNB3Q8WWL7 1395 aa32.66■■■□□ 2.82
ELL3-202ENST00000433927 SYCP2Q9BX26 1530 aa32.64■■■□□ 2.82
ELL3-202ENST00000433927 PLEKHH2Q8IVE3 1493 aa32.63■■■□□ 2.81
ELL3-202ENST00000433927 SPAG9O60271 1321 aaKnown RBP32.63■■■□□ 2.81
ELL3-202ENST00000433927 HNRNPMP52272 730 aaKnown RBP eCLIP32.63■■■□□ 2.81
ELL3-202ENST00000433927 KIAA1107Q9UPP5 1409 aa32.61■■■□□ 2.81
ELL3-202ENST00000433927 UHRF1BP1Q6BDS2 1440 aa32.6■■■□□ 2.81
ELL3-202ENST00000433927 C3P01024 1663 aa32.57■■■□□ 2.8
ELL3-202ENST00000433927 CEP162Q5TB80 1403 aa32.56■■■□□ 2.8
ELL3-202ENST00000433927 CNTLNQ9NXG0 1405 aa32.56■■■□□ 2.8
ELL3-202ENST00000433927 ATP7AQ04656 1500 aa32.52■■■□□ 2.8
ELL3-202ENST00000433927 EHBP1L1Q8N3D4 1523 aa32.52■■■□□ 2.8
ELL3-202ENST00000433927 DMRT2Q9Y5R5 561 aa32.51■■■□□ 2.79
ELL3-202ENST00000433927 INO80Q9ULG1 1556 aaPredicted RBP32.48■■■□□ 2.79
ELL3-202ENST00000433927 SUPT6HQ7KZ85 1726 aaKnown RBP32.48■■■□□ 2.79
ELL3-202ENST00000433927 TIAM1Q13009 1591 aa32.47■■■□□ 2.79
ELL3-202ENST00000433927 CERKQ8TCT0 537 aa32.45■■■□□ 2.79
ELL3-202ENST00000433927 A2MP01023 1474 aa32.44■■■□□ 2.78
ELL3-202ENST00000433927 STRCQ7RTU9 1775 aa32.44■■■□□ 2.78
ELL3-202ENST00000433927 MROH2AA6NES4 1674 aa32.43■■■□□ 2.78
ELL3-202ENST00000433927 ZNF644Q9H582 1327 aaPredicted RBP32.42■■■□□ 2.78
ELL3-202ENST00000433927 PLXNC1O60486 1568 aa32.41■■■□□ 2.78
ELL3-202ENST00000433927 ZMYM3Q14202 1370 aa32.39■■■□□ 2.78
ELL3-202ENST00000433927 ADGBQ8N7X0 1667 aa32.37■■■□□ 2.77
ELL3-202ENST00000433927 MBD5Q9P267 1494 aa32.37■■■□□ 2.77
ELL3-202ENST00000433927 NPATQ14207 1427 aa32.37■■■□□ 2.77
ELL3-202ENST00000433927 GGT6Q6P531 493 aa32.35■■■□□ 2.77
ELL3-202ENST00000433927 RTEL1-TNFRSF6BF6WH68 1400 aa32.34■■■□□ 2.77
ELL3-202ENST00000433927 CLTCQ00610 1675 aaKnown RBP32.33■■■□□ 2.77
ELL3-202ENST00000433927 NCOA2Q15596 1464 aa32.32■■■□□ 2.76
ELL3-202ENST00000433927 PPP6R1Q9UPN7 881 aa32.32■■■□□ 2.76
ELL3-202ENST00000433927 PTPRTO14522 1441 aa32.31■■■□□ 2.76
ELL3-202ENST00000433927 RSPH4AQ5TD94 716 aa32.28■■■□□ 2.76
ELL3-202ENST00000433927 NCOA1Q15788 1441 aa32.26■■■□□ 2.75
ELL3-202ENST00000433927 CCDC141Q6ZP82 1450 aa32.25■■■□□ 2.75
ELL3-202ENST00000433927 DHX29Q7Z478 1369 aaKnown RBP32.25■■■□□ 2.75
ELL3-202ENST00000433927 CAMSAP2Q08AD1 1489 aa32.24■■■□□ 2.75
ELL3-202ENST00000433927 LOC105371045A0A1W2PR82 267 aa32.24■■■□□ 2.75
ELL3-202ENST00000433927 VPS8Q8N3P4 1428 aa32.24■■■□□ 2.75
ELL3-202ENST00000433927 CAMSAP1Q5T5Y3 1602 aa32.21■■■□□ 2.75
ELL3-202ENST00000433927 PTPRKQ15262 1439 aa32.2■■■□□ 2.75
ELL3-202ENST00000433927 LRRC9Q6ZRR7 1453 aa32.16■■■□□ 2.74
ELL3-202ENST00000433927 MYO3AQ8NEV4 1616 aa32.16■■■□□ 2.74
ELL3-202ENST00000433927 KIF3BO15066 747 aa32.15■■■□□ 2.74
ELL3-202ENST00000433927 TSPY4P0CV99 314 aa32.15■■■□□ 2.74
ELL3-202ENST00000433927 TSPY10P0CW01 314 aa32.15■■■□□ 2.74
ELL3-202ENST00000433927 ZNF142P52746 1687 aaPredicted RBP32.15■■■□□ 2.74
ELL3-202ENST00000433927 ARHGEF5Q12774 1597 aa32.13■■■□□ 2.73
ELL3-202ENST00000433927 CEP170BQ9Y4F5 1589 aaPredicted RBP32.12■■■□□ 2.73
ELL3-202ENST00000433927 NCKAP5LQ9HCH0 1330 aa32.09■■■□□ 2.73
ELL3-202ENST00000433927 PKD2Q13563 968 aa32.09■■■□□ 2.73
ELL3-202ENST00000433927 MAP3K1Q13233 1512 aa32.09■■■□□ 2.73
ELL3-202ENST00000433927 PLA2R1Q13018 1463 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms