RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CCDC18Q5T9S5 1454 aa20.7■□□□□ 0.9
DDX56-205ENST00000433257 PLEKHD1A6NEE1 506 aa20.69■□□□□ 0.9
DDX56-205ENST00000433257 FAM69CQ0P6D2 419 aa20.68■□□□□ 0.9
DDX56-205ENST00000433257 HECW1Q76N89 1606 aa20.68■□□□□ 0.9
DDX56-205ENST00000433257 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
DDX56-205ENST00000433257 PTPN23Q9H3S7 1636 aa20.67■□□□□ 0.9
DDX56-205ENST00000433257 KCNH8Q96L42 1107 aa20.67■□□□□ 0.9
DDX56-205ENST00000433257 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
DDX56-205ENST00000433257 SUPT6HQ7KZ85 1726 aaKnown RBP20.65■□□□□ 0.9
DDX56-205ENST00000433257 EHBP1L1Q8N3D4 1523 aa20.65■□□□□ 0.9
DDX56-205ENST00000433257 FKBP8Q14318 412 aa20.65■□□□□ 0.9
DDX56-205ENST00000433257 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
DDX56-205ENST00000433257 EPRSP07814 1512 aaKnown RBP20.64■□□□□ 0.89
DDX56-205ENST00000433257 WDR7Q9Y4E6 1490 aa20.63■□□□□ 0.89
DDX56-205ENST00000433257 MTUS2Q5JR59 1369 aa20.62■□□□□ 0.89
DDX56-205ENST00000433257 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
DDX56-205ENST00000433257 AKNAQ7Z591 1439 aa20.61■□□□□ 0.89
DDX56-205ENST00000433257 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
DDX56-205ENST00000433257 CDK13Q14004 1512 aaKnown RBP20.59■□□□□ 0.89
DDX56-205ENST00000433257 GCC2Q8IWJ2 1684 aa20.57■□□□□ 0.88
DDX56-205ENST00000433257 DIP2BQ9P265 1576 aa20.56■□□□□ 0.88
DDX56-205ENST00000433257 NAIPQ13075 1403 aa20.54■□□□□ 0.88
DDX56-205ENST00000433257 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
DDX56-205ENST00000433257 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
DDX56-205ENST00000433257 KIF13AQ9H1H9 1805 aa20.52■□□□□ 0.88
DDX56-205ENST00000433257 GLI2P10070 1586 aa20.51■□□□□ 0.87
DDX56-205ENST00000433257 LRRIQ1Q96JM4 1722 aa20.5■□□□□ 0.87
DDX56-205ENST00000433257 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
DDX56-205ENST00000433257 CD109Q6YHK3 1445 aa20.47■□□□□ 0.87
DDX56-205ENST00000433257 BCANQ96GW7 911 aa20.45■□□□□ 0.86
DDX56-205ENST00000433257 MIA2Q96PC5 1412 aa20.45■□□□□ 0.86
DDX56-205ENST00000433257 RBM19Q9Y4C8 960 aaKnown RBP20.44■□□□□ 0.86
DDX56-205ENST00000433257 PTPRKQ15262 1439 aa20.43■□□□□ 0.86
DDX56-205ENST00000433257 TSPOAP1O95153 1857 aa20.41■□□□□ 0.86
DDX56-205ENST00000433257 MAP3K4Q9Y6R4 1608 aa20.41■□□□□ 0.86
DDX56-205ENST00000433257 TRIM52Q96A61 297 aa20.4■□□□□ 0.86
DDX56-205ENST00000433257 ABCA9Q8IUA7 1624 aa20.4■□□□□ 0.86
DDX56-205ENST00000433257 TEX14Q8IWB6 1497 aa20.38■□□□□ 0.85
DDX56-205ENST00000433257 MAGI3Q5TCQ9 1506 aa20.38■□□□□ 0.85
DDX56-205ENST00000433257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.38■□□□□ 0.85
DDX56-205ENST00000433257 KIF14Q15058 1648 aa20.38■□□□□ 0.85
DDX56-205ENST00000433257 CNTLNQ9NXG0 1405 aa20.38■□□□□ 0.85
DDX56-205ENST00000433257 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
DDX56-205ENST00000433257 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.85
DDX56-205ENST00000433257 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
DDX56-205ENST00000433257 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
DDX56-205ENST00000433257 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
DDX56-205ENST00000433257 PLCH2O75038 1416 aa20.32■□□□□ 0.84
DDX56-205ENST00000433257 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX56-205ENST00000433257 TTC37Q6PGP7 1564 aa20.32■□□□□ 0.84
DDX56-205ENST00000433257 EFCAB2Q5VUJ9 269 aa20.31■□□□□ 0.84
DDX56-205ENST00000433257 PPRC1Q5VV67 1664 aaKnown RBP20.3■□□□□ 0.84
DDX56-205ENST00000433257 HIRIP3Q9BW71 556 aaPredicted RBP20.29■□□□□ 0.84
DDX56-205ENST00000433257 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
DDX56-205ENST00000433257 PPP4R2Q9NY27 417 aa20.28■□□□□ 0.84
DDX56-205ENST00000433257 NCOA1Q15788 1441 aa20.28■□□□□ 0.84
DDX56-205ENST00000433257 FANCAO15360 1455 aa20.27■□□□□ 0.83
DDX56-205ENST00000433257 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
DDX56-205ENST00000433257 NEO1Q92859 1461 aa20.26■□□□□ 0.83
DDX56-205ENST00000433257 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
DDX56-205ENST00000433257 MYO5CQ9NQX4 1742 aa20.25■□□□□ 0.83
DDX56-205ENST00000433257 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
DDX56-205ENST00000433257 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
DDX56-205ENST00000433257 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
DDX56-205ENST00000433257 GPATCH8Q9UKJ3 1502 aaKnown RBP20.23■□□□□ 0.83
DDX56-205ENST00000433257 ZBED9Q6R2W3 1325 aa20.23■□□□□ 0.83
DDX56-205ENST00000433257 ARAP3Q8WWN8 1544 aa20.23■□□□□ 0.83
DDX56-205ENST00000433257 CCDC7Q96M83 1385 aa20.22■□□□□ 0.83
DDX56-205ENST00000433257 DENND4BO75064 1496 aaPredicted RBP20.21■□□□□ 0.83
DDX56-205ENST00000433257 KDM6BO15054 1643 aa20.21■□□□□ 0.83
DDX56-205ENST00000433257 DNMT1P26358 1616 aaKnown RBP20.21■□□□□ 0.83
DDX56-205ENST00000433257 CFAP74Q9C0B2 1584 aa20.21■□□□□ 0.83
DDX56-205ENST00000433257 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
DDX56-205ENST00000433257 ERICH6Q7L0X2 663 aa20.19■□□□□ 0.82
DDX56-205ENST00000433257 CDC42BPAQ5VT25 1732 aa20.18■□□□□ 0.82
DDX56-205ENST00000433257 CDC42BPBQ9Y5S2 1711 aa20.18■□□□□ 0.82
DDX56-205ENST00000433257 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
DDX56-205ENST00000433257 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
DDX56-205ENST00000433257 RAPGEF3O95398 923 aa20.16■□□□□ 0.82
DDX56-205ENST00000433257 ADGRL1O94910 1474 aa20.16■□□□□ 0.82
DDX56-205ENST00000433257 COL17A1Q9UMD9 1497 aaPredicted RBP20.16■□□□□ 0.82
DDX56-205ENST00000433257 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
DDX56-205ENST00000433257 ARID4BQ4LE39 1312 aaPredicted RBP20.16■□□□□ 0.82
DDX56-205ENST00000433257 ANKRD30BQ9BXX2 1392 aa20.15■□□□□ 0.82
DDX56-205ENST00000433257 RRP7BPQ9NSQ0 103 aa20.15■□□□□ 0.82
DDX56-205ENST00000433257 DAPK1P53355 1430 aa20.15■□□□□ 0.82
DDX56-205ENST00000433257 ITSN2Q9NZM3 1697 aa20.13■□□□□ 0.81
DDX56-205ENST00000433257 L3MBTL2Q969R5 705 aa20.12■□□□□ 0.81
DDX56-205ENST00000433257 SPATA31E1Q6ZUB1 1445 aa20.11■□□□□ 0.81
DDX56-205ENST00000433257 ADGBQ8N7X0 1667 aa20.11■□□□□ 0.81
DDX56-205ENST00000433257 HNRNPMP52272 730 aaKnown RBP eCLIP20.1■□□□□ 0.81
DDX56-205ENST00000433257 ZNF644Q9H582 1327 aaPredicted RBP20.1■□□□□ 0.81
DDX56-205ENST00000433257 PLEKHH2Q8IVE3 1493 aa20.09■□□□□ 0.81
DDX56-205ENST00000433257 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
DDX56-205ENST00000433257 AFAP1Q8N556 730 aa20.08■□□□□ 0.81
DDX56-205ENST00000433257 BCL11AQ9H165 835 aa20.08■□□□□ 0.81
DDX56-205ENST00000433257 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
DDX56-205ENST00000433257 ROCK2O75116 1388 aaKnown RBP20.07■□□□□ 0.8
DDX56-205ENST00000433257 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
DDX56-205ENST00000433257 KIAA1107Q9UPP5 1409 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms