RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 CFAP74Q9C0B2 1584 aa17.62■□□□□ 0.41
HOXD3-203ENST00000432796 CEBPAP49715 358 aaPredicted RBP17.61■□□□□ 0.41
HOXD3-203ENST00000432796 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
HOXD3-203ENST00000432796 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
HOXD3-203ENST00000432796 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
HOXD3-203ENST00000432796 ATP10AO60312 1499 aa17.56■□□□□ 0.4
HOXD3-203ENST00000432796 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
HOXD3-203ENST00000432796 C9orf84Q5VXU9 1444 aa17.55■□□□□ 0.4
HOXD3-203ENST00000432796 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
HOXD3-203ENST00000432796 PLEKHD1A6NEE1 506 aa17.53■□□□□ 0.4
HOXD3-203ENST00000432796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.52■□□□□ 0.4
HOXD3-203ENST00000432796 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
HOXD3-203ENST00000432796 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
HOXD3-203ENST00000432796 NCOA1Q15788 1441 aa17.49■□□□□ 0.39
HOXD3-203ENST00000432796 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
HOXD3-203ENST00000432796 SETD1BQ9UPS6 1966 aaKnown RBP17.45■□□□□ 0.38
HOXD3-203ENST00000432796 TRAPPC8Q9Y2L5 1435 aa17.44■□□□□ 0.38
HOXD3-203ENST00000432796 PLCH2O75038 1416 aa17.43■□□□□ 0.38
HOXD3-203ENST00000432796 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
HOXD3-203ENST00000432796 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
HOXD3-203ENST00000432796 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
HOXD3-203ENST00000432796 C3P01024 1663 aa17.38■□□□□ 0.37
HOXD3-203ENST00000432796 REREQ9P2R6 1566 aa17.36■□□□□ 0.37
HOXD3-203ENST00000432796 HSPA1LP34931 641 aa17.36■□□□□ 0.37
HOXD3-203ENST00000432796 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
HOXD3-203ENST00000432796 ESF1Q9H501 851 aaKnown RBP17.36■□□□□ 0.37
HOXD3-203ENST00000432796 CAMSAP1Q5T5Y3 1602 aa17.36■□□□□ 0.37
HOXD3-203ENST00000432796 KDM5CP41229 1560 aa17.34■□□□□ 0.37
HOXD3-203ENST00000432796 AGLP35573 1532 aa17.33■□□□□ 0.37
HOXD3-203ENST00000432796 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
HOXD3-203ENST00000432796 CNTLNQ9NXG0 1405 aa17.32■□□□□ 0.36
HOXD3-203ENST00000432796 NCKAP5LQ9HCH0 1330 aa17.32■□□□□ 0.36
HOXD3-203ENST00000432796 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
HOXD3-203ENST00000432796 NPATQ14207 1427 aa17.31■□□□□ 0.36
HOXD3-203ENST00000432796 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
HOXD3-203ENST00000432796 PKD2Q13563 968 aa17.3■□□□□ 0.36
HOXD3-203ENST00000432796 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
HOXD3-203ENST00000432796 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
HOXD3-203ENST00000432796 PLA2R1Q13018 1463 aa17.28■□□□□ 0.36
HOXD3-203ENST00000432796 CDK13Q14004 1512 aaKnown RBP17.27■□□□□ 0.36
HOXD3-203ENST00000432796 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
HOXD3-203ENST00000432796 PIP4K2BP78356 416 aa17.27■□□□□ 0.36
HOXD3-203ENST00000432796 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
HOXD3-203ENST00000432796 TOM1O60784 492 aa17.25■□□□□ 0.35
HOXD3-203ENST00000432796 RANGAP1P46060 587 aaPredicted RBP17.25■□□□□ 0.35
HOXD3-203ENST00000432796 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
HOXD3-203ENST00000432796 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
HOXD3-203ENST00000432796 MYO5CQ9NQX4 1742 aa17.23■□□□□ 0.35
HOXD3-203ENST00000432796 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.35
HOXD3-203ENST00000432796 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
HOXD3-203ENST00000432796 CPS1P31327 1500 aa17.18■□□□□ 0.34
HOXD3-203ENST00000432796 MROH2AA6NES4 1674 aa17.18■□□□□ 0.34
HOXD3-203ENST00000432796 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
HOXD3-203ENST00000432796 ZNF142P52746 1687 aaPredicted RBP17.17■□□□□ 0.34
HOXD3-203ENST00000432796 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
HOXD3-203ENST00000432796 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
HOXD3-203ENST00000432796 KIF14Q15058 1648 aa17.15■□□□□ 0.34
HOXD3-203ENST00000432796 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
HOXD3-203ENST00000432796 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
HOXD3-203ENST00000432796 TROQ12816 1431 aaPredicted RBP17.13■□□□□ 0.33
HOXD3-203ENST00000432796 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
HOXD3-203ENST00000432796 ABCC1P33527 1531 aa17.11■□□□□ 0.33
HOXD3-203ENST00000432796 CLIP1P30622 1438 aa17.1■□□□□ 0.33
HOXD3-203ENST00000432796 RGS17Q9UGC6 210 aaPredicted RBP17.09■□□□□ 0.33
HOXD3-203ENST00000432796 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
HOXD3-203ENST00000432796 ALKQ9UM73 1620 aa17.08■□□□□ 0.32
HOXD3-203ENST00000432796 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.32
HOXD3-203ENST00000432796 A2ML1A8K2U0 1454 aa17.06■□□□□ 0.32
HOXD3-203ENST00000432796 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
HOXD3-203ENST00000432796 EEA1Q15075 1411 aa17.04■□□□□ 0.32
HOXD3-203ENST00000432796 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
HOXD3-203ENST00000432796 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
HOXD3-203ENST00000432796 NEURL4Q96JN8 1562 aa17.03■□□□□ 0.32
HOXD3-203ENST00000432796 CLTCQ00610 1675 aaKnown RBP17.03■□□□□ 0.32
HOXD3-203ENST00000432796 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
HOXD3-203ENST00000432796 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.32
HOXD3-203ENST00000432796 PREX2Q70Z35 1606 aa17.02■□□□□ 0.31
HOXD3-203ENST00000432796 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
HOXD3-203ENST00000432796 SAMD9LQ8IVG5 1584 aa17.01■□□□□ 0.31
HOXD3-203ENST00000432796 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
HOXD3-203ENST00000432796 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
HOXD3-203ENST00000432796 PLXNC1O60486 1568 aa16.99■□□□□ 0.31
HOXD3-203ENST00000432796 GGT6Q6P531 493 aa16.98■□□□□ 0.31
HOXD3-203ENST00000432796 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-203ENST00000432796 A2MP01023 1474 aa16.97■□□□□ 0.31
HOXD3-203ENST00000432796 ANKLE2Q86XL3 938 aa16.96■□□□□ 0.31
HOXD3-203ENST00000432796 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
HOXD3-203ENST00000432796 ATP7AQ04656 1500 aa16.94■□□□□ 0.3
HOXD3-203ENST00000432796 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-203ENST00000432796 MED14O60244 1454 aa16.93■□□□□ 0.3
HOXD3-203ENST00000432796 TNRQ92752 1358 aa16.93■□□□□ 0.3
HOXD3-203ENST00000432796 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
HOXD3-203ENST00000432796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.93■□□□□ 0.3
HOXD3-203ENST00000432796 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
HOXD3-203ENST00000432796 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
HOXD3-203ENST00000432796 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
HOXD3-203ENST00000432796 THEMISQ8N1K5 641 aaPredicted RBP16.9■□□□□ 0.3
HOXD3-203ENST00000432796 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
HOXD3-203ENST00000432796 INO80Q9ULG1 1556 aaPredicted RBP16.89■□□□□ 0.3
HOXD3-203ENST00000432796 SYNMO15061 1565 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms