RNA–Protein interactions for RNA: ENST00000431678.5

PBRM1-213, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-213ENST00000431678 ZFYVE16Q7Z3T8 1539 aa38.93■■■■□ 3.82
PBRM1-213ENST00000431678 SCAPERQ9BY12 1400 aa38.89■■■■□ 3.82
PBRM1-213ENST00000431678 POGZQ7Z3K3 1410 aa38.86■■■■□ 3.81
PBRM1-213ENST00000431678 MAGI2Q86UL8 1455 aa38.82■■■■□ 3.81
PBRM1-213ENST00000431678 PCF11O94913 1555 aaKnown RBP38.81■■■■□ 3.8
PBRM1-213ENST00000431678 LMTK3Q96Q04 1460 aa38.79■■■■□ 3.8
PBRM1-213ENST00000431678 TROQ12816 1431 aaPredicted RBP38.79■■■■□ 3.8
PBRM1-213ENST00000431678 PLPPR3Q6T4P5 718 aa38.77■■■■□ 3.8
PBRM1-213ENST00000431678 CDK11AQ9UQ88 783 aaPredicted RBP38.77■■■■□ 3.8
PBRM1-213ENST00000431678 EFCAB2Q5VUJ9 269 aa38.76■■■■□ 3.8
PBRM1-213ENST00000431678 MLECQ14165 292 aa38.74■■■■□ 3.79
PBRM1-213ENST00000431678 FER1L4A9Z1Z3 1794 aa38.73■■■■□ 3.79
PBRM1-213ENST00000431678 CDC42BPBQ9Y5S2 1711 aa38.72■■■■□ 3.79
PBRM1-213ENST00000431678 ARHGAP5Q13017 1502 aa38.71■■■■□ 3.79
PBRM1-213ENST00000431678 ATP10AO60312 1499 aa38.66■■■■□ 3.78
PBRM1-213ENST00000431678 CLIP1P30622 1438 aa38.66■■■■□ 3.78
PBRM1-213ENST00000431678 C9orf84Q5VXU9 1444 aa38.63■■■■□ 3.77
PBRM1-213ENST00000431678 AFAP1Q8N556 730 aa38.62■■■■□ 3.77
PBRM1-213ENST00000431678 CASKIN1Q8WXD9 1431 aa38.62■■■■□ 3.77
PBRM1-213ENST00000431678 KDM5CP41229 1560 aa38.61■■■■□ 3.77
PBRM1-213ENST00000431678 HSPA2P54652 639 aa38.61■■■■□ 3.77
PBRM1-213ENST00000431678 ZNF518AQ6AHZ1 1483 aa38.6■■■■□ 3.77
PBRM1-213ENST00000431678 ARHGEF12Q9NZN5 1544 aa38.59■■■■□ 3.77
PBRM1-213ENST00000431678 PREX2Q70Z35 1606 aa38.58■■■■□ 3.77
PBRM1-213ENST00000431678 CCDC18Q5T9S5 1454 aa38.54■■■■□ 3.76
PBRM1-213ENST00000431678 CDC42BPAQ5VT25 1732 aa38.53■■■■□ 3.76
PBRM1-213ENST00000431678 DIP2CQ9Y2E4 1556 aa38.53■■■■□ 3.76
PBRM1-213ENST00000431678 ABCA6Q8N139 1617 aa38.5■■■■□ 3.75
PBRM1-213ENST00000431678 ITSN2Q9NZM3 1697 aa38.49■■■■□ 3.75
PBRM1-213ENST00000431678 ABCC1P33527 1531 aa38.48■■■■□ 3.75
PBRM1-213ENST00000431678 TRAPPC8Q9Y2L5 1435 aa38.47■■■■□ 3.75
PBRM1-213ENST00000431678 CEBPAP49715 358 aaPredicted RBP38.46■■■■□ 3.75
PBRM1-213ENST00000431678 FBXO41Q8TF61 875 aa38.46■■■■□ 3.75
PBRM1-213ENST00000431678 MYT1LQ9UL68 1186 aa38.46■■■■□ 3.75
PBRM1-213ENST00000431678 FYCO1Q9BQS8 1478 aa38.44■■■■□ 3.74
PBRM1-213ENST00000431678 MLH3Q9UHC1 1453 aa38.41■■■■□ 3.74
PBRM1-213ENST00000431678 REREQ9P2R6 1566 aa38.4■■■■□ 3.74
PBRM1-213ENST00000431678 PREX1Q8TCU6 1659 aa38.39■■■■□ 3.74
PBRM1-213ENST00000431678 KIDINS220Q9ULH0 1771 aa38.38■■■■□ 3.73
PBRM1-213ENST00000431678 SAMD9LQ8IVG5 1584 aa38.33■■■■□ 3.73
PBRM1-213ENST00000431678 C3P01024 1663 aa38.29■■■■□ 3.72
PBRM1-213ENST00000431678 GPATCH8Q9UKJ3 1502 aaKnown RBP38.28■■■■□ 3.72
PBRM1-213ENST00000431678 ZNF777Q9ULD5 760 aaPredicted RBP38.28■■■■□ 3.72
PBRM1-213ENST00000431678 AGLP35573 1532 aa38.27■■■■□ 3.72
PBRM1-213ENST00000431678 SYCP2Q9BX26 1530 aa38.24■■■■□ 3.71
PBRM1-213ENST00000431678 SETD1BQ9UPS6 1966 aaKnown RBP38.23■■■■□ 3.71
PBRM1-213ENST00000431678 STRCQ7RTU9 1775 aa38.23■■■■□ 3.71
PBRM1-213ENST00000431678 HNRNPMP52272 730 aaKnown RBP eCLIP38.18■■■■□ 3.7
PBRM1-213ENST00000431678 UHRF1BP1Q6BDS2 1440 aa38.14■■■■□ 3.7
PBRM1-213ENST00000431678 SUPT6HQ7KZ85 1726 aaKnown RBP38.13■■■■□ 3.69
PBRM1-213ENST00000431678 CERKQ8TCT0 537 aa38.09■■■■□ 3.69
PBRM1-213ENST00000431678 SPAG9O60271 1321 aaKnown RBP38.09■■■■□ 3.69
PBRM1-213ENST00000431678 CFDP1Q9UEE9 299 aaPredicted RBP38.08■■■■□ 3.69
PBRM1-213ENST00000431678 CCNB3Q8WWL7 1395 aa38.07■■■■□ 3.69
PBRM1-213ENST00000431678 ATP7AQ04656 1500 aa38.07■■■■□ 3.68
PBRM1-213ENST00000431678 MTUS2Q5JR59 1369 aa38.06■■■■□ 3.68
PBRM1-213ENST00000431678 INO80Q9ULG1 1556 aaPredicted RBP38.06■■■■□ 3.68
PBRM1-213ENST00000431678 ESF1Q9H501 851 aaKnown RBP38.06■■■■□ 3.68
PBRM1-213ENST00000431678 KIAA1107Q9UPP5 1409 aa38.04■■■■□ 3.68
PBRM1-213ENST00000431678 TIAM1Q13009 1591 aa38.03■■■■□ 3.68
PBRM1-213ENST00000431678 MROH2AA6NES4 1674 aa38■■■■□ 3.67
PBRM1-213ENST00000431678 PLXNC1O60486 1568 aa37.99■■■■□ 3.67
PBRM1-213ENST00000431678 PLEKHH2Q8IVE3 1493 aa37.99■■■■□ 3.67
PBRM1-213ENST00000431678 CNTLNQ9NXG0 1405 aa37.99■■■■□ 3.67
PBRM1-213ENST00000431678 ZNF644Q9H582 1327 aaPredicted RBP37.99■■■■□ 3.67
PBRM1-213ENST00000431678 CLTCQ00610 1675 aaKnown RBP37.97■■■■□ 3.67
PBRM1-213ENST00000431678 EHBP1L1Q8N3D4 1523 aa37.97■■■■□ 3.67
PBRM1-213ENST00000431678 CEP162Q5TB80 1403 aa37.96■■■■□ 3.67
PBRM1-213ENST00000431678 A2MP01023 1474 aa37.94■■■■□ 3.66
PBRM1-213ENST00000431678 DMRT2Q9Y5R5 561 aa37.91■■■■□ 3.66
PBRM1-213ENST00000431678 ZMYM3Q14202 1370 aa37.91■■■■□ 3.66
PBRM1-213ENST00000431678 MBD5Q9P267 1494 aa37.9■■■■□ 3.66
PBRM1-213ENST00000431678 ADGBQ8N7X0 1667 aa37.88■■■■□ 3.66
PBRM1-213ENST00000431678 PTPRTO14522 1441 aa37.84■■■■□ 3.65
PBRM1-213ENST00000431678 NPATQ14207 1427 aa37.84■■■■□ 3.65
PBRM1-213ENST00000431678 NCOA1Q15788 1441 aa37.82■■■■□ 3.64
PBRM1-213ENST00000431678 GGT6Q6P531 493 aa37.82■■■■□ 3.64
PBRM1-213ENST00000431678 CAMSAP1Q5T5Y3 1602 aa37.8■■■■□ 3.64
PBRM1-213ENST00000431678 MYO3AQ8NEV4 1616 aa37.77■■■■□ 3.64
PBRM1-213ENST00000431678 NCOA2Q15596 1464 aa37.77■■■■□ 3.64
PBRM1-213ENST00000431678 PTPRKQ15262 1439 aa37.74■■■■□ 3.63
PBRM1-213ENST00000431678 LTBP4Q8N2S1 1624 aa37.74■■■■□ 3.63
PBRM1-213ENST00000431678 ZNF142P52746 1687 aaPredicted RBP37.72■■■■□ 3.63
PBRM1-213ENST00000431678 RTEL1-TNFRSF6BF6WH68 1400 aa37.71■■■■□ 3.63
PBRM1-213ENST00000431678 CAMSAP2Q08AD1 1489 aa37.71■■■■□ 3.63
PBRM1-213ENST00000431678 NCKAP5LQ9HCH0 1330 aa37.67■■■■□ 3.62
PBRM1-213ENST00000431678 LOC105371045A0A1W2PR82 267 aa37.67■■■■□ 3.62
PBRM1-213ENST00000431678 CEP170BQ9Y4F5 1589 aaPredicted RBP37.67■■■■□ 3.62
PBRM1-213ENST00000431678 DHX29Q7Z478 1369 aaKnown RBP37.66■■■■□ 3.62
PBRM1-213ENST00000431678 CCDC141Q6ZP82 1450 aa37.65■■■■□ 3.62
PBRM1-213ENST00000431678 PPP6R1Q9UPN7 881 aa37.6■■■■□ 3.61
PBRM1-213ENST00000431678 KIF3BO15066 747 aa37.57■■■■□ 3.6
PBRM1-213ENST00000431678 VPS8Q8N3P4 1428 aa37.55■■■■□ 3.6
PBRM1-213ENST00000431678 ARHGEF5Q12774 1597 aa37.55■■■■□ 3.6
PBRM1-213ENST00000431678 PLA2R1Q13018 1463 aa37.54■■■■□ 3.6
PBRM1-213ENST00000431678 LRRC9Q6ZRR7 1453 aa37.54■■■■□ 3.6
PBRM1-213ENST00000431678 TCOF1Q13428 1488 aaKnown RBP37.52■■■■□ 3.6
PBRM1-213ENST00000431678 DNMT1P26358 1616 aaKnown RBP37.52■■■■□ 3.6
PBRM1-213ENST00000431678 FBXO31Q5XUX0 539 aaPredicted RBP37.51■■■■□ 3.6
PBRM1-213ENST00000431678 ZNF335Q9H4Z2 1342 aaPredicted RBP37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms