RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
SPTLC3-202ENST00000431275 RAPGEF3O95398 923 aa17.37■□□□□ 0.37
SPTLC3-202ENST00000431275 CFAP74Q9C0B2 1584 aa17.36■□□□□ 0.37
SPTLC3-202ENST00000431275 NCOA2Q15596 1464 aa17.36■□□□□ 0.37
SPTLC3-202ENST00000431275 CFDP1Q9UEE9 299 aaPredicted RBP17.35■□□□□ 0.37
SPTLC3-202ENST00000431275 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
SPTLC3-202ENST00000431275 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
SPTLC3-202ENST00000431275 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
SPTLC3-202ENST00000431275 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
SPTLC3-202ENST00000431275 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
SPTLC3-202ENST00000431275 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
SPTLC3-202ENST00000431275 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
SPTLC3-202ENST00000431275 DENND4BO75064 1496 aaPredicted RBP17.33■□□□□ 0.37
SPTLC3-202ENST00000431275 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.36
SPTLC3-202ENST00000431275 AFAP1Q8N556 730 aa17.27■□□□□ 0.36
SPTLC3-202ENST00000431275 HNRNPMP52272 730 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPTLC3-202ENST00000431275 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
SPTLC3-202ENST00000431275 FRMPD1Q5SYB0 1578 aa17.26■□□□□ 0.35
SPTLC3-202ENST00000431275 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
SPTLC3-202ENST00000431275 ARHGEF12Q9NZN5 1544 aa17.26■□□□□ 0.35
SPTLC3-202ENST00000431275 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
SPTLC3-202ENST00000431275 ABCC1P33527 1531 aa17.25■□□□□ 0.35
SPTLC3-202ENST00000431275 RICTORQ6R327 1708 aa17.24■□□□□ 0.35
SPTLC3-202ENST00000431275 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
SPTLC3-202ENST00000431275 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
SPTLC3-202ENST00000431275 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
SPTLC3-202ENST00000431275 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
SPTLC3-202ENST00000431275 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
SPTLC3-202ENST00000431275 ZNF518AQ6AHZ1 1483 aa17.22■□□□□ 0.35
SPTLC3-202ENST00000431275 MIA2Q96PC5 1412 aa17.21■□□□□ 0.34
SPTLC3-202ENST00000431275 MYT1LQ9UL68 1186 aa17.2■□□□□ 0.34
SPTLC3-202ENST00000431275 ZMYM4Q5VZL5 1548 aa17.2■□□□□ 0.34
SPTLC3-202ENST00000431275 SYCP2Q9BX26 1530 aa17.2■□□□□ 0.34
SPTLC3-202ENST00000431275 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
SPTLC3-202ENST00000431275 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
SPTLC3-202ENST00000431275 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
SPTLC3-202ENST00000431275 KDM5CP41229 1560 aa17.17■□□□□ 0.34
SPTLC3-202ENST00000431275 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
SPTLC3-202ENST00000431275 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
SPTLC3-202ENST00000431275 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
SPTLC3-202ENST00000431275 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
SPTLC3-202ENST00000431275 MLH3Q9UHC1 1453 aa17.15■□□□□ 0.34
SPTLC3-202ENST00000431275 FGD6Q6ZV73 1430 aa17.14■□□□□ 0.33
SPTLC3-202ENST00000431275 ARHGEF40Q8TER5 1519 aa17.12■□□□□ 0.33
SPTLC3-202ENST00000431275 HECW2Q9P2P5 1572 aa17.12■□□□□ 0.33
SPTLC3-202ENST00000431275 ATP10AO60312 1499 aa17.12■□□□□ 0.33
SPTLC3-202ENST00000431275 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
SPTLC3-202ENST00000431275 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
SPTLC3-202ENST00000431275 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
SPTLC3-202ENST00000431275 ARID4BQ4LE39 1312 aaPredicted RBP17.1■□□□□ 0.33
SPTLC3-202ENST00000431275 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
SPTLC3-202ENST00000431275 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
SPTLC3-202ENST00000431275 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
SPTLC3-202ENST00000431275 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
SPTLC3-202ENST00000431275 KDM4FA0A1W2PPD8 638 aa17.08■□□□□ 0.32
SPTLC3-202ENST00000431275 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.32
SPTLC3-202ENST00000431275 RTEL1-TNFRSF6BF6WH68 1400 aa17.07■□□□□ 0.32
SPTLC3-202ENST00000431275 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
SPTLC3-202ENST00000431275 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
SPTLC3-202ENST00000431275 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
SPTLC3-202ENST00000431275 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
SPTLC3-202ENST00000431275 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
SPTLC3-202ENST00000431275 ABCC5O15440 1437 aa17.04■□□□□ 0.32
SPTLC3-202ENST00000431275 DAPK1P53355 1430 aa17.02■□□□□ 0.31
SPTLC3-202ENST00000431275 REREQ9P2R6 1566 aa17.02■□□□□ 0.31
SPTLC3-202ENST00000431275 MLECQ14165 292 aa17.01■□□□□ 0.31
SPTLC3-202ENST00000431275 SIGLEC1Q9BZZ2 1709 aa17.01■□□□□ 0.31
SPTLC3-202ENST00000431275 A2MP01023 1474 aa17■□□□□ 0.31
SPTLC3-202ENST00000431275 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
SPTLC3-202ENST00000431275 MAST1Q9Y2H9 1570 aa16.99■□□□□ 0.31
SPTLC3-202ENST00000431275 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
SPTLC3-202ENST00000431275 DHX29Q7Z478 1369 aaKnown RBP16.99■□□□□ 0.31
SPTLC3-202ENST00000431275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPTLC3-202ENST00000431275 AGLP35573 1532 aa16.97■□□□□ 0.31
SPTLC3-202ENST00000431275 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
SPTLC3-202ENST00000431275 SHANK2Q9UPX8 1470 aa16.97■□□□□ 0.31
SPTLC3-202ENST00000431275 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
SPTLC3-202ENST00000431275 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
SPTLC3-202ENST00000431275 AEBP2Q6ZN18 517 aaPredicted RBP16.95■□□□□ 0.3
SPTLC3-202ENST00000431275 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
SPTLC3-202ENST00000431275 ADAMTSL3P82987 1691 aa16.94■□□□□ 0.3
SPTLC3-202ENST00000431275 ITGAEP38570 1179 aa16.94■□□□□ 0.3
SPTLC3-202ENST00000431275 CROCC2H7BZ55 1655 aa16.94■□□□□ 0.3
SPTLC3-202ENST00000431275 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
SPTLC3-202ENST00000431275 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
SPTLC3-202ENST00000431275 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
SPTLC3-202ENST00000431275 KIF3BO15066 747 aa16.92■□□□□ 0.3
SPTLC3-202ENST00000431275 GGT6Q6P531 493 aa16.92■□□□□ 0.3
SPTLC3-202ENST00000431275 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
SPTLC3-202ENST00000431275 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
SPTLC3-202ENST00000431275 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
SPTLC3-202ENST00000431275 ADGRL2O95490 1459 aa16.89■□□□□ 0.29
SPTLC3-202ENST00000431275 DUOX2Q9NRD8 1548 aa16.89■□□□□ 0.29
SPTLC3-202ENST00000431275 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
SPTLC3-202ENST00000431275 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
SPTLC3-202ENST00000431275 PTPRMP28827 1452 aa16.86■□□□□ 0.29
SPTLC3-202ENST00000431275 ROCK1Q13464 1354 aa16.85■□□□□ 0.29
SPTLC3-202ENST00000431275 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
SPTLC3-202ENST00000431275 ERBINQ96RT1 1412 aa16.84■□□□□ 0.29
SPTLC3-202ENST00000431275 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms