RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 YEATS2Q9ULM3 1422 aa28.54■■■□□ 2.16
RCC1-209ENST00000430407 PLPPR3Q6T4P5 718 aa28.54■■■□□ 2.16
RCC1-209ENST00000430407 CLIP1P30622 1438 aa28.52■■■□□ 2.16
RCC1-209ENST00000430407 MLECQ14165 292 aa28.52■■■□□ 2.16
RCC1-209ENST00000430407 RIMS1Q86UR5 1692 aaKnown RBP28.49■■■□□ 2.15
RCC1-209ENST00000430407 PCF11O94913 1555 aaKnown RBP28.49■■■□□ 2.15
RCC1-209ENST00000430407 TROQ12816 1431 aaPredicted RBP28.48■■■□□ 2.15
RCC1-209ENST00000430407 MYT1LQ9UL68 1186 aa28.47■■■□□ 2.15
RCC1-209ENST00000430407 KIF14Q15058 1648 aa28.47■■■□□ 2.15
RCC1-209ENST00000430407 LMTK3Q96Q04 1460 aa28.45■■■□□ 2.14
RCC1-209ENST00000430407 CASKIN1Q8WXD9 1431 aa28.44■■■□□ 2.14
RCC1-209ENST00000430407 MYO5CQ9NQX4 1742 aa28.44■■■□□ 2.14
RCC1-209ENST00000430407 ATP10AO60312 1499 aa28.43■■■□□ 2.14
RCC1-209ENST00000430407 ARHGAP5Q13017 1502 aa28.43■■■□□ 2.14
RCC1-209ENST00000430407 FBXO41Q8TF61 875 aa28.42■■■□□ 2.14
RCC1-209ENST00000430407 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
RCC1-209ENST00000430407 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
RCC1-209ENST00000430407 AFAP1Q8N556 730 aa28.38■■■□□ 2.13
RCC1-209ENST00000430407 HSPA2P54652 639 aa28.37■■■□□ 2.13
RCC1-209ENST00000430407 CCDC18Q5T9S5 1454 aa28.36■■■□□ 2.13
RCC1-209ENST00000430407 FYCO1Q9BQS8 1478 aa28.34■■■□□ 2.13
RCC1-209ENST00000430407 SIGLEC1Q9BZZ2 1709 aa28.33■■■□□ 2.13
RCC1-209ENST00000430407 CEP162Q5TB80 1403 aa28.31■■■□□ 2.12
RCC1-209ENST00000430407 FER1L4A9Z1Z3 1794 aa28.3■■■□□ 2.12
RCC1-209ENST00000430407 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
RCC1-209ENST00000430407 LRRIQ1Q96JM4 1722 aa28.28■■■□□ 2.12
RCC1-209ENST00000430407 LOC105371045A0A1W2PR82 267 aa28.27■■■□□ 2.12
RCC1-209ENST00000430407 KDM5CP41229 1560 aa28.27■■■□□ 2.12
RCC1-209ENST00000430407 CEBPAP49715 358 aaPredicted RBP28.24■■■□□ 2.11
RCC1-209ENST00000430407 ESF1Q9H501 851 aaKnown RBP28.24■■■□□ 2.11
RCC1-209ENST00000430407 MLH3Q9UHC1 1453 aa28.21■■■□□ 2.11
RCC1-209ENST00000430407 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
RCC1-209ENST00000430407 CDC42BPBQ9Y5S2 1711 aa28.2■■■□□ 2.1
RCC1-209ENST00000430407 PREX2Q70Z35 1606 aa28.19■■■□□ 2.1
RCC1-209ENST00000430407 TRAPPC8Q9Y2L5 1435 aa28.18■■■□□ 2.1
RCC1-209ENST00000430407 DIP2CQ9Y2E4 1556 aa28.18■■■□□ 2.1
RCC1-209ENST00000430407 ABCC1P33527 1531 aa28.17■■■□□ 2.1
RCC1-209ENST00000430407 REREQ9P2R6 1566 aa28.14■■■□□ 2.1
RCC1-209ENST00000430407 UHRF1BP1Q6BDS2 1440 aa28.12■■■□□ 2.09
RCC1-209ENST00000430407 DMRT2Q9Y5R5 561 aa28.11■■■□□ 2.09
RCC1-209ENST00000430407 ABCA6Q8N139 1617 aa28.1■■■□□ 2.09
RCC1-209ENST00000430407 PREX1Q8TCU6 1659 aa28.1■■■□□ 2.09
RCC1-209ENST00000430407 AGLP35573 1532 aa28.09■■■□□ 2.09
RCC1-209ENST00000430407 CERKQ8TCT0 537 aa28.09■■■□□ 2.09
RCC1-209ENST00000430407 ITSN2Q9NZM3 1697 aa28.09■■■□□ 2.09
RCC1-209ENST00000430407 CFDP1Q9UEE9 299 aaPredicted RBP28.07■■■□□ 2.08
RCC1-209ENST00000430407 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
RCC1-209ENST00000430407 MTUS2Q5JR59 1369 aa28.06■■■□□ 2.08
RCC1-209ENST00000430407 HNRNPMP52272 730 aaKnown RBP eCLIP28.05■■■□□ 2.088e-6■■□□□ 11.4
RCC1-209ENST00000430407 CDC42BPAQ5VT25 1732 aa28.05■■■□□ 2.08
RCC1-209ENST00000430407 CCNB3Q8WWL7 1395 aa28.05■■■□□ 2.08
RCC1-209ENST00000430407 GPATCH8Q9UKJ3 1502 aaKnown RBP28.05■■■□□ 2.08
RCC1-209ENST00000430407 CNTLNQ9NXG0 1405 aa28.02■■■□□ 2.08
RCC1-209ENST00000430407 PLEKHH2Q8IVE3 1493 aa28.01■■■□□ 2.07
RCC1-209ENST00000430407 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
RCC1-209ENST00000430407 SAMD9LQ8IVG5 1584 aa28■■■□□ 2.07
RCC1-209ENST00000430407 SYCP2Q9BX26 1530 aa28■■■□□ 2.07
RCC1-209ENST00000430407 KIDINS220Q9ULH0 1771 aa28■■■□□ 2.07
RCC1-209ENST00000430407 KIAA1107Q9UPP5 1409 aa27.97■■■□□ 2.07
RCC1-209ENST00000430407 SETD1BQ9UPS6 1966 aaKnown RBP27.96■■■□□ 2.07
RCC1-209ENST00000430407 EHBP1L1Q8N3D4 1523 aa27.95■■■□□ 2.06
RCC1-209ENST00000430407 C3P01024 1663 aa27.94■■■□□ 2.06
RCC1-209ENST00000430407 ATP7AQ04656 1500 aa27.91■■■□□ 2.06
RCC1-209ENST00000430407 ZMYM3Q14202 1370 aa27.88■■■□□ 2.05
RCC1-209ENST00000430407 GGT6Q6P531 493 aa27.87■■■□□ 2.05
RCC1-209ENST00000430407 A2MP01023 1474 aa27.87■■■□□ 2.05
RCC1-209ENST00000430407 TIAM1Q13009 1591 aa27.86■■■□□ 2.05
RCC1-209ENST00000430407 STRCQ7RTU9 1775 aa27.86■■■□□ 2.05
RCC1-209ENST00000430407 PTPRTO14522 1441 aa27.86■■■□□ 2.05
RCC1-209ENST00000430407 NPATQ14207 1427 aa27.86■■■□□ 2.05
RCC1-209ENST00000430407 SUPT6HQ7KZ85 1726 aaKnown RBP27.84■■■□□ 2.05
RCC1-209ENST00000430407 ZNF644Q9H582 1327 aaPredicted RBP27.83■■■□□ 2.05
RCC1-209ENST00000430407 INO80Q9ULG1 1556 aaPredicted RBP27.82■■■□□ 2.04
RCC1-209ENST00000430407 PPP6R1Q9UPN7 881 aa27.81■■■□□ 2.04
RCC1-209ENST00000430407 MAP3K1Q13233 1512 aa27.81■■■□□ 2.04
RCC1-209ENST00000430407 MROH2AA6NES4 1674 aa27.81■■■□□ 2.04
RCC1-209ENST00000430407 NCOA2Q15596 1464 aa27.78■■■□□ 2.04
RCC1-209ENST00000430407 LRRC9Q6ZRR7 1453 aa27.78■■■□□ 2.04
RCC1-209ENST00000430407 NCOA1Q15788 1441 aa27.78■■■□□ 2.04
RCC1-209ENST00000430407 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
RCC1-209ENST00000430407 RTEL1-TNFRSF6BF6WH68 1400 aa27.75■■■□□ 2.03
RCC1-209ENST00000430407 APLP2Q06481 763 aa27.74■■■□□ 2.03
RCC1-209ENST00000430407 MBD5Q9P267 1494 aa27.74■■■□□ 2.03
RCC1-209ENST00000430407 RSPH4AQ5TD94 716 aa27.73■■■□□ 2.03
RCC1-209ENST00000430407 CAMSAP1Q5T5Y3 1602 aa27.73■■■□□ 2.03
RCC1-209ENST00000430407 CLTCQ00610 1675 aaKnown RBP27.72■■■□□ 2.03
RCC1-209ENST00000430407 ADGBQ8N7X0 1667 aa27.72■■■□□ 2.03
RCC1-209ENST00000430407 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
RCC1-209ENST00000430407 DHX29Q7Z478 1369 aaKnown RBP27.71■■■□□ 2.03
RCC1-209ENST00000430407 NCKAP5LQ9HCH0 1330 aa27.69■■■□□ 2.02
RCC1-209ENST00000430407 PTPRKQ15262 1439 aa27.69■■■□□ 2.02
RCC1-209ENST00000430407 PKD2Q13563 968 aa27.68■■■□□ 2.02
RCC1-209ENST00000430407 KIF3BO15066 747 aa27.67■■■□□ 2.02
RCC1-209ENST00000430407 CCDC141Q6ZP82 1450 aa27.66■■■□□ 2.02
RCC1-209ENST00000430407 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
RCC1-209ENST00000430407 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
RCC1-209ENST00000430407 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.01
RCC1-209ENST00000430407 LTBP4Q8N2S1 1624 aa27.62■■■□□ 2.01
RCC1-209ENST00000430407 MYO3AQ8NEV4 1616 aa27.62■■■□□ 2.01
RCC1-209ENST00000430407 PLA2R1Q13018 1463 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms