RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 PTPRMP28827 1452 aa27.95■■■□□ 2.07
CPSF4-203ENST00000430038 ARID4BQ4LE39 1312 aaPredicted RBP27.94■■■□□ 2.06
CPSF4-203ENST00000430038 MADDQ8WXG6 1647 aa27.94■■■□□ 2.06
CPSF4-203ENST00000430038 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
CPSF4-203ENST00000430038 CDC42BPBQ9Y5S2 1711 aa27.92■■■□□ 2.06
CPSF4-203ENST00000430038 EFCAB2Q5VUJ9 269 aa27.92■■■□□ 2.06
CPSF4-203ENST00000430038 ZFYVE16Q7Z3T8 1539 aa27.9■■■□□ 2.06
CPSF4-203ENST00000430038 CLIP1P30622 1438 aa27.9■■■□□ 2.06
CPSF4-203ENST00000430038 MAGI2Q86UL8 1455 aa27.86■■■□□ 2.05
CPSF4-203ENST00000430038 ARHGAP5Q13017 1502 aa27.85■■■□□ 2.05
CPSF4-203ENST00000430038 RIMS1Q86UR5 1692 aaKnown RBP27.84■■■□□ 2.05
CPSF4-203ENST00000430038 CCDC18Q5T9S5 1454 aa27.84■■■□□ 2.05
CPSF4-203ENST00000430038 AFAP1Q8N556 730 aa27.84■■■□□ 2.05
CPSF4-203ENST00000430038 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.04
CPSF4-203ENST00000430038 ARHGEF12Q9NZN5 1544 aa27.8■■■□□ 2.04
CPSF4-203ENST00000430038 PREX2Q70Z35 1606 aa27.8■■■□□ 2.04
CPSF4-203ENST00000430038 CDC42BPAQ5VT25 1732 aa27.8■■■□□ 2.04
CPSF4-203ENST00000430038 KDM5CP41229 1560 aa27.77■■■□□ 2.04
CPSF4-203ENST00000430038 ATP10AO60312 1499 aa27.77■■■□□ 2.04
CPSF4-203ENST00000430038 MLECQ14165 292 aa27.77■■■□□ 2.04
CPSF4-203ENST00000430038 ZNF518AQ6AHZ1 1483 aa27.75■■■□□ 2.03
CPSF4-203ENST00000430038 TRAPPC8Q9Y2L5 1435 aa27.75■■■□□ 2.03
CPSF4-203ENST00000430038 ABCC1P33527 1531 aa27.71■■■□□ 2.03
CPSF4-203ENST00000430038 C9orf84Q5VXU9 1444 aa27.7■■■□□ 2.03
CPSF4-203ENST00000430038 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.02
CPSF4-203ENST00000430038 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.02
CPSF4-203ENST00000430038 FER1L4A9Z1Z3 1794 aa27.7■■■□□ 2.02
CPSF4-203ENST00000430038 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
CPSF4-203ENST00000430038 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
CPSF4-203ENST00000430038 ILDR1Q86SU0 546 aaPredicted RBP27.68■■■□□ 2.02
CPSF4-203ENST00000430038 GPATCH8Q9UKJ3 1502 aaKnown RBP27.67■■■□□ 2.02
CPSF4-203ENST00000430038 ABCA6Q8N139 1617 aa27.67■■■□□ 2.02
CPSF4-203ENST00000430038 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
CPSF4-203ENST00000430038 MLH3Q9UHC1 1453 aa27.64■■■□□ 2.02
CPSF4-203ENST00000430038 CEP162Q5TB80 1403 aa27.64■■■□□ 2.02
CPSF4-203ENST00000430038 KIDINS220Q9ULH0 1771 aa27.63■■■□□ 2.01
CPSF4-203ENST00000430038 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
CPSF4-203ENST00000430038 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
CPSF4-203ENST00000430038 MYT1LQ9UL68 1186 aa27.61■■■□□ 2.01
CPSF4-203ENST00000430038 CEBPAP49715 358 aaPredicted RBP27.59■■■□□ 2.01
CPSF4-203ENST00000430038 HNRNPMP52272 730 aaKnown RBP eCLIP27.58■■■□□ 2.01
CPSF4-203ENST00000430038 HSPA2P54652 639 aa27.58■■■□□ 2.01
CPSF4-203ENST00000430038 REREQ9P2R6 1566 aa27.57■■■□□ 2
CPSF4-203ENST00000430038 SYCP2Q9BX26 1530 aa27.57■■■□□ 2
CPSF4-203ENST00000430038 MTUS2Q5JR59 1369 aa27.54■■■□□ 2
CPSF4-203ENST00000430038 CCNB3Q8WWL7 1395 aa27.51■■□□□ 1.99
CPSF4-203ENST00000430038 ZNF644Q9H582 1327 aaPredicted RBP27.51■■□□□ 1.99
CPSF4-203ENST00000430038 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
CPSF4-203ENST00000430038 TIAM1Q13009 1591 aa27.5■■□□□ 1.99
CPSF4-203ENST00000430038 AGLP35573 1532 aa27.49■■□□□ 1.99
CPSF4-203ENST00000430038 KIAA1107Q9UPP5 1409 aa27.46■■□□□ 1.99
CPSF4-203ENST00000430038 EHBP1L1Q8N3D4 1523 aa27.45■■□□□ 1.98
CPSF4-203ENST00000430038 SPAG9O60271 1321 aaKnown RBP27.43■■□□□ 1.98
CPSF4-203ENST00000430038 C3P01024 1663 aa27.43■■□□□ 1.98
CPSF4-203ENST00000430038 PREX1Q8TCU6 1659 aa27.42■■□□□ 1.98
CPSF4-203ENST00000430038 SUPT6HQ7KZ85 1726 aaKnown RBP27.41■■□□□ 1.98
CPSF4-203ENST00000430038 INO80Q9ULG1 1556 aaPredicted RBP27.41■■□□□ 1.98
CPSF4-203ENST00000430038 ATP7AQ04656 1500 aa27.41■■□□□ 1.98
CPSF4-203ENST00000430038 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
CPSF4-203ENST00000430038 MBD5Q9P267 1494 aa27.39■■□□□ 1.98
CPSF4-203ENST00000430038 PLEKHH2Q8IVE3 1493 aa27.38■■□□□ 1.97
CPSF4-203ENST00000430038 NCOA2Q15596 1464 aa27.36■■□□□ 1.97
CPSF4-203ENST00000430038 PLXNC1O60486 1568 aa27.34■■□□□ 1.97
CPSF4-203ENST00000430038 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.96
CPSF4-203ENST00000430038 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
CPSF4-203ENST00000430038 A2MP01023 1474 aa27.32■■□□□ 1.96
CPSF4-203ENST00000430038 KANK4Q5T7N3 995 aaPredicted RBP27.28■■□□□ 1.96
CPSF4-203ENST00000430038 ESF1Q9H501 851 aaKnown RBP27.26■■□□□ 1.95
CPSF4-203ENST00000430038 ADGBQ8N7X0 1667 aa27.26■■□□□ 1.95
CPSF4-203ENST00000430038 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
CPSF4-203ENST00000430038 LRRC9Q6ZRR7 1453 aa27.25■■□□□ 1.95
CPSF4-203ENST00000430038 UHRF1BP1Q6BDS2 1440 aa27.25■■□□□ 1.95
CPSF4-203ENST00000430038 CLTCQ00610 1675 aaKnown RBP27.25■■□□□ 1.95
CPSF4-203ENST00000430038 FBXO41Q8TF61 875 aa27.25■■□□□ 1.95
CPSF4-203ENST00000430038 ZMYM3Q14202 1370 aa27.24■■□□□ 1.95
CPSF4-203ENST00000430038 MROH2AA6NES4 1674 aa27.24■■□□□ 1.95
CPSF4-203ENST00000430038 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
CPSF4-203ENST00000430038 GGT6Q6P531 493 aa27.22■■□□□ 1.95
CPSF4-203ENST00000430038 RTEL1-TNFRSF6BF6WH68 1400 aa27.22■■□□□ 1.95
CPSF4-203ENST00000430038 DHX29Q7Z478 1369 aaKnown RBP27.17■■□□□ 1.94
CPSF4-203ENST00000430038 CCDC141Q6ZP82 1450 aa27.17■■□□□ 1.94
CPSF4-203ENST00000430038 MAP3K1Q13233 1512 aa27.14■■□□□ 1.94
CPSF4-203ENST00000430038 NPATQ14207 1427 aa27.13■■□□□ 1.93
CPSF4-203ENST00000430038 ARHGEF5Q12774 1597 aa27.13■■□□□ 1.93
CPSF4-203ENST00000430038 PTPRKQ15262 1439 aa27.12■■□□□ 1.93
CPSF4-203ENST00000430038 CERKQ8TCT0 537 aa27.11■■□□□ 1.93
CPSF4-203ENST00000430038 RSPH4AQ5TD94 716 aa27.09■■□□□ 1.93
CPSF4-203ENST00000430038 KIF3BO15066 747 aa27.08■■□□□ 1.93
CPSF4-203ENST00000430038 NCOA1Q15788 1441 aa27.06■■□□□ 1.92
CPSF4-203ENST00000430038 PPP6R1Q9UPN7 881 aa27.05■■□□□ 1.92
CPSF4-203ENST00000430038 CAMSAP1Q5T5Y3 1602 aa27.05■■□□□ 1.92
CPSF4-203ENST00000430038 MYO3AQ8NEV4 1616 aa27.05■■□□□ 1.92
CPSF4-203ENST00000430038 DMRT2Q9Y5R5 561 aa27.04■■□□□ 1.92
CPSF4-203ENST00000430038 MYOM3Q5VTT5 1437 aa27.04■■□□□ 1.92
CPSF4-203ENST00000430038 PTPRTO14522 1441 aa27.03■■□□□ 1.92
CPSF4-203ENST00000430038 FBXO31Q5XUX0 539 aaPredicted RBP27.02■■□□□ 1.92
CPSF4-203ENST00000430038 ZNF142P52746 1687 aaPredicted RBP27.01■■□□□ 1.92
CPSF4-203ENST00000430038 TSPY4P0CV99 314 aa27.01■■□□□ 1.91
CPSF4-203ENST00000430038 TSPY10P0CW01 314 aa27.01■■□□□ 1.91
CPSF4-203ENST00000430038 NCKAP5LQ9HCH0 1330 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms