RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
SNRNP200-202ENST00000429650 ABCC5O15440 1437 aa18.64■□□□□ 0.57
SNRNP200-202ENST00000429650 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
SNRNP200-202ENST00000429650 WASHC2AQ641Q2 1341 aa18.63■□□□□ 0.57
SNRNP200-202ENST00000429650 BCANQ96GW7 911 aa18.62■□□□□ 0.57
SNRNP200-202ENST00000429650 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
SNRNP200-202ENST00000429650 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
SNRNP200-202ENST00000429650 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNRNP200-202ENST00000429650 FOXD1Q16676 465 aa18.6■□□□□ 0.57
SNRNP200-202ENST00000429650 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
SNRNP200-202ENST00000429650 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
SNRNP200-202ENST00000429650 NEFLP07196 543 aa18.58■□□□□ 0.56
SNRNP200-202ENST00000429650 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.56
SNRNP200-202ENST00000429650 CDK11AQ9UQ88 783 aaPredicted RBP18.57■□□□□ 0.56
SNRNP200-202ENST00000429650 TEX14Q8IWB6 1497 aa18.55■□□□□ 0.56
SNRNP200-202ENST00000429650 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
SNRNP200-202ENST00000429650 TROQ12816 1431 aaPredicted RBP18.54■□□□□ 0.56
SNRNP200-202ENST00000429650 CNTLNQ9NXG0 1405 aa18.54■□□□□ 0.56
SNRNP200-202ENST00000429650 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
SNRNP200-202ENST00000429650 NCOA1Q15788 1441 aa18.53■□□□□ 0.56
SNRNP200-202ENST00000429650 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
SNRNP200-202ENST00000429650 ITSN2Q9NZM3 1697 aa18.52■□□□□ 0.56
SNRNP200-202ENST00000429650 CEP170Q5SW79 1584 aa18.52■□□□□ 0.55
SNRNP200-202ENST00000429650 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.55
SNRNP200-202ENST00000429650 NBPF8Q3BBV2 869 aa18.51■□□□□ 0.55
SNRNP200-202ENST00000429650 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
SNRNP200-202ENST00000429650 PLB1Q6P1J6 1458 aa18.5■□□□□ 0.55
SNRNP200-202ENST00000429650 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
SNRNP200-202ENST00000429650 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
SNRNP200-202ENST00000429650 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNRNP200-202ENST00000429650 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
SNRNP200-202ENST00000429650 ADGBQ8N7X0 1667 aa18.49■□□□□ 0.55
SNRNP200-202ENST00000429650 PZPP20742 1482 aa18.49■□□□□ 0.55
SNRNP200-202ENST00000429650 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
SNRNP200-202ENST00000429650 SYNJ2O15056 1496 aa18.48■□□□□ 0.55
SNRNP200-202ENST00000429650 KIF14Q15058 1648 aa18.48■□□□□ 0.55
SNRNP200-202ENST00000429650 CFDP1Q9UEE9 299 aaPredicted RBP18.48■□□□□ 0.55
SNRNP200-202ENST00000429650 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
SNRNP200-202ENST00000429650 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
SNRNP200-202ENST00000429650 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
SNRNP200-202ENST00000429650 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
SNRNP200-202ENST00000429650 ADGRL2O95490 1459 aa18.45■□□□□ 0.54
SNRNP200-202ENST00000429650 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
SNRNP200-202ENST00000429650 PRKRIP1Q9H875 184 aaPredicted RBP18.42■□□□□ 0.54
SNRNP200-202ENST00000429650 CARMIL2Q6F5E8 1435 aa18.42■□□□□ 0.54
SNRNP200-202ENST00000429650 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
SNRNP200-202ENST00000429650 NUP160Q12769 1436 aa18.42■□□□□ 0.54
SNRNP200-202ENST00000429650 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
SNRNP200-202ENST00000429650 ZNF777Q9ULD5 760 aaPredicted RBP18.4■□□□□ 0.54
SNRNP200-202ENST00000429650 MBD5Q9P267 1494 aa18.4■□□□□ 0.54
SNRNP200-202ENST00000429650 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
SNRNP200-202ENST00000429650 FBLN2P98095 1184 aa18.39■□□□□ 0.54
SNRNP200-202ENST00000429650 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
SNRNP200-202ENST00000429650 ANKRD30AQ9BXX3 1397 aa18.38■□□□□ 0.53
SNRNP200-202ENST00000429650 CDC42BPAQ5VT25 1732 aa18.37■□□□□ 0.53
SNRNP200-202ENST00000429650 ABCA8O94911 1581 aa18.36■□□□□ 0.53
SNRNP200-202ENST00000429650 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
SNRNP200-202ENST00000429650 ABCC10Q5T3U5 1492 aa18.34■□□□□ 0.53
SNRNP200-202ENST00000429650 PKD2Q13563 968 aa18.34■□□□□ 0.53
SNRNP200-202ENST00000429650 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
SNRNP200-202ENST00000429650 SHANK2Q9UPX8 1470 aa18.33■□□□□ 0.52
SNRNP200-202ENST00000429650 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
SNRNP200-202ENST00000429650 ATP10BO94823 1461 aa18.31■□□□□ 0.52
SNRNP200-202ENST00000429650 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
SNRNP200-202ENST00000429650 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
SNRNP200-202ENST00000429650 RBM19Q9Y4C8 960 aaKnown RBP18.3■□□□□ 0.52
SNRNP200-202ENST00000429650 USP47Q96K76 1375 aa18.3■□□□□ 0.52
SNRNP200-202ENST00000429650 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
SNRNP200-202ENST00000429650 IRX6P78412 446 aaPredicted RBP18.29■□□□□ 0.52
SNRNP200-202ENST00000429650 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
SNRNP200-202ENST00000429650 KDM5CP41229 1560 aa18.28■□□□□ 0.52
SNRNP200-202ENST00000429650 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.51
SNRNP200-202ENST00000429650 KDM5DQ9BY66 1539 aa18.27■□□□□ 0.51
SNRNP200-202ENST00000429650 NUP155O75694 1391 aa18.26■□□□□ 0.51
SNRNP200-202ENST00000429650 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
SNRNP200-202ENST00000429650 UHRF1BP1Q6BDS2 1440 aa18.26■□□□□ 0.51
SNRNP200-202ENST00000429650 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
SNRNP200-202ENST00000429650 ANP32EQ9BTT0 268 aa18.25■□□□□ 0.51
SNRNP200-202ENST00000429650 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
SNRNP200-202ENST00000429650 RALGAPBQ86X10 1494 aa18.24■□□□□ 0.51
SNRNP200-202ENST00000429650 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
SNRNP200-202ENST00000429650 ARHGEF5Q12774 1597 aa18.23■□□□□ 0.51
SNRNP200-202ENST00000429650 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
SNRNP200-202ENST00000429650 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
SNRNP200-202ENST00000429650 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
SNRNP200-202ENST00000429650 CNGB1Q14028 1251 aaPredicted RBP18.21■□□□□ 0.51
SNRNP200-202ENST00000429650 PTPRGP23470 1445 aa18.21■□□□□ 0.51
SNRNP200-202ENST00000429650 KIF15Q9NS87 1388 aa18.2■□□□□ 0.5
SNRNP200-202ENST00000429650 HNRNPMP52272 730 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNRNP200-202ENST00000429650 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
SNRNP200-202ENST00000429650 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
SNRNP200-202ENST00000429650 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
SNRNP200-202ENST00000429650 CDC42BPBQ9Y5S2 1711 aa18.17■□□□□ 0.5
SNRNP200-202ENST00000429650 ROCK2O75116 1388 aaKnown RBP18.16■□□□□ 0.5
SNRNP200-202ENST00000429650 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
SNRNP200-202ENST00000429650 CARD11Q9BXL7 1154 aa18.16■□□□□ 0.5
SNRNP200-202ENST00000429650 CCDC141Q6ZP82 1450 aa18.15■□□□□ 0.5
SNRNP200-202ENST00000429650 FAM135AQ9P2D6 1515 aa18.12■□□□□ 0.49
SNRNP200-202ENST00000429650 SMG6Q86US8 1419 aaKnown RBP18.11■□□□□ 0.49
SNRNP200-202ENST00000429650 KDM2AQ9Y2K7 1162 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms