RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 EFCAB2Q5VUJ9 269 aa29.07■■■□□ 2.24
SSR4P1-202ENST00000429427 ZMYM4Q5VZL5 1548 aa29.07■■■□□ 2.24
SSR4P1-202ENST00000429427 POGZQ7Z3K3 1410 aa29.07■■■□□ 2.24
SSR4P1-202ENST00000429427 PREX2Q70Z35 1606 aa29.06■■■□□ 2.24
SSR4P1-202ENST00000429427 ARHGEF40Q8TER5 1519 aa29.05■■■□□ 2.24
SSR4P1-202ENST00000429427 CDC42BPAQ5VT25 1732 aa29.02■■■□□ 2.24
SSR4P1-202ENST00000429427 YEATS2Q9ULM3 1422 aa29■■■□□ 2.23
SSR4P1-202ENST00000429427 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
SSR4P1-202ENST00000429427 GPATCH8Q9UKJ3 1502 aaKnown RBP28.98■■■□□ 2.23
SSR4P1-202ENST00000429427 ARHGEF12Q9NZN5 1544 aa28.97■■■□□ 2.23
SSR4P1-202ENST00000429427 ZFYVE16Q7Z3T8 1539 aa28.96■■■□□ 2.23
SSR4P1-202ENST00000429427 MTUS2Q5JR59 1369 aa28.96■■■□□ 2.23
SSR4P1-202ENST00000429427 ABCC1P33527 1531 aa28.95■■■□□ 2.23
SSR4P1-202ENST00000429427 SIGLEC1Q9BZZ2 1709 aa28.94■■■□□ 2.22
SSR4P1-202ENST00000429427 MAGI2Q86UL8 1455 aa28.94■■■□□ 2.22
SSR4P1-202ENST00000429427 EHBP1L1Q8N3D4 1523 aa28.94■■■□□ 2.22
SSR4P1-202ENST00000429427 KDM5CP41229 1560 aa28.93■■■□□ 2.22
SSR4P1-202ENST00000429427 ZNF518AQ6AHZ1 1483 aa28.91■■■□□ 2.22
SSR4P1-202ENST00000429427 AFAP1Q8N556 730 aa28.91■■■□□ 2.22
SSR4P1-202ENST00000429427 TIAM1Q13009 1591 aa28.9■■■□□ 2.22
SSR4P1-202ENST00000429427 SAMD9LQ8IVG5 1584 aa28.89■■■□□ 2.22
SSR4P1-202ENST00000429427 TRAPPC8Q9Y2L5 1435 aa28.89■■■□□ 2.22
SSR4P1-202ENST00000429427 ADAMTSL3P82987 1691 aa28.88■■■□□ 2.21
SSR4P1-202ENST00000429427 ITSN2Q9NZM3 1697 aa28.88■■■□□ 2.21
SSR4P1-202ENST00000429427 BCORL1Q5H9F3 1711 aa28.86■■■□□ 2.21
SSR4P1-202ENST00000429427 CCNB3Q8WWL7 1395 aa28.85■■■□□ 2.21
SSR4P1-202ENST00000429427 SYCP2Q9BX26 1530 aa28.82■■■□□ 2.2
SSR4P1-202ENST00000429427 HECW2Q9P2P5 1572 aa28.81■■■□□ 2.2
SSR4P1-202ENST00000429427 ARID4BQ4LE39 1312 aaPredicted RBP28.8■■■□□ 2.2
SSR4P1-202ENST00000429427 ZNF777Q9ULD5 760 aaPredicted RBP28.8■■■□□ 2.2
SSR4P1-202ENST00000429427 ATP10AO60312 1499 aa28.79■■■□□ 2.2
SSR4P1-202ENST00000429427 MLH3Q9UHC1 1453 aa28.79■■■□□ 2.2
SSR4P1-202ENST00000429427 CFDP1Q9UEE9 299 aaPredicted RBP28.79■■■□□ 2.2
SSR4P1-202ENST00000429427 DIP2CQ9Y2E4 1556 aa28.79■■■□□ 2.2
SSR4P1-202ENST00000429427 NCOA2Q15596 1464 aa28.78■■■□□ 2.2
SSR4P1-202ENST00000429427 MADDQ8WXG6 1647 aa28.78■■■□□ 2.2
SSR4P1-202ENST00000429427 LRRC9Q6ZRR7 1453 aa28.78■■■□□ 2.2
SSR4P1-202ENST00000429427 ABCA6Q8N139 1617 aa28.77■■■□□ 2.2
SSR4P1-202ENST00000429427 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
SSR4P1-202ENST00000429427 MAP3K1Q13233 1512 aa28.75■■■□□ 2.19
SSR4P1-202ENST00000429427 KIAA1107Q9UPP5 1409 aa28.75■■■□□ 2.19
SSR4P1-202ENST00000429427 SUPT6HQ7KZ85 1726 aaKnown RBP28.74■■■□□ 2.19
SSR4P1-202ENST00000429427 ZNF644Q9H582 1327 aaPredicted RBP28.74■■■□□ 2.19
SSR4P1-202ENST00000429427 PTPRMP28827 1452 aa28.74■■■□□ 2.19
SSR4P1-202ENST00000429427 KANK4Q5T7N3 995 aaPredicted RBP28.74■■■□□ 2.19
SSR4P1-202ENST00000429427 HNRNPMP52272 730 aaKnown RBP eCLIP28.73■■■□□ 2.19
SSR4P1-202ENST00000429427 KIDINS220Q9ULH0 1771 aa28.73■■■□□ 2.19
SSR4P1-202ENST00000429427 PLEKHH2Q8IVE3 1493 aa28.7■■■□□ 2.18
SSR4P1-202ENST00000429427 REREQ9P2R6 1566 aa28.69■■■□□ 2.18
SSR4P1-202ENST00000429427 MBD5Q9P267 1494 aa28.68■■■□□ 2.18
SSR4P1-202ENST00000429427 RIMS1Q86UR5 1692 aaKnown RBP28.66■■■□□ 2.18
SSR4P1-202ENST00000429427 INO80Q9ULG1 1556 aaPredicted RBP28.64■■■□□ 2.18
SSR4P1-202ENST00000429427 MLECQ14165 292 aa28.64■■■□□ 2.18
SSR4P1-202ENST00000429427 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
SSR4P1-202ENST00000429427 CAMSAP2Q08AD1 1489 aa28.61■■■□□ 2.17
SSR4P1-202ENST00000429427 ATP7AQ04656 1500 aa28.61■■■□□ 2.17
SSR4P1-202ENST00000429427 SPAG9O60271 1321 aaKnown RBP28.61■■■□□ 2.17
SSR4P1-202ENST00000429427 AGLP35573 1532 aa28.59■■■□□ 2.17
SSR4P1-202ENST00000429427 FER1L4A9Z1Z3 1794 aa28.57■■■□□ 2.16
SSR4P1-202ENST00000429427 PLXNC1O60486 1568 aa28.53■■■□□ 2.16
SSR4P1-202ENST00000429427 MYOM3Q5VTT5 1437 aa28.52■■■□□ 2.16
SSR4P1-202ENST00000429427 CCDC141Q6ZP82 1450 aa28.51■■■□□ 2.15
SSR4P1-202ENST00000429427 ARHGEF5Q12774 1597 aa28.47■■■□□ 2.15
SSR4P1-202ENST00000429427 A2MP01023 1474 aa28.46■■■□□ 2.15
SSR4P1-202ENST00000429427 RTEL1-TNFRSF6BF6WH68 1400 aa28.46■■■□□ 2.15
SSR4P1-202ENST00000429427 MIA2Q96PC5 1412 aa28.45■■■□□ 2.15
SSR4P1-202ENST00000429427 LMTK3Q96Q04 1460 aa28.44■■■□□ 2.14
SSR4P1-202ENST00000429427 APLP2Q06481 763 aa28.43■■■□□ 2.14
SSR4P1-202ENST00000429427 PLPPR3Q6T4P5 718 aa28.43■■■□□ 2.14
SSR4P1-202ENST00000429427 ADGBQ8N7X0 1667 aa28.42■■■□□ 2.14
SSR4P1-202ENST00000429427 CEBPAP49715 358 aaPredicted RBP28.4■■■□□ 2.14
SSR4P1-202ENST00000429427 RSPH4AQ5TD94 716 aa28.38■■■□□ 2.13
SSR4P1-202ENST00000429427 DHX29Q7Z478 1369 aaKnown RBP28.34■■■□□ 2.13
SSR4P1-202ENST00000429427 MAST1Q9Y2H9 1570 aa28.33■■■□□ 2.13
SSR4P1-202ENST00000429427 C3P01024 1663 aa28.33■■■□□ 2.13
SSR4P1-202ENST00000429427 FGD6Q6ZV73 1430 aa28.33■■■□□ 2.13
SSR4P1-202ENST00000429427 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
SSR4P1-202ENST00000429427 TCOF1Q13428 1488 aaKnown RBP28.29■■■□□ 2.12
SSR4P1-202ENST00000429427 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
SSR4P1-202ENST00000429427 TSPY4P0CV99 314 aa28.27■■■□□ 2.12
SSR4P1-202ENST00000429427 TSPY10P0CW01 314 aa28.27■■■□□ 2.12
SSR4P1-202ENST00000429427 ABCC5O15440 1437 aa28.26■■■□□ 2.12
SSR4P1-202ENST00000429427 MROH2AA6NES4 1674 aa28.26■■■□□ 2.11
SSR4P1-202ENST00000429427 HSPA2P54652 639 aa28.25■■■□□ 2.11
SSR4P1-202ENST00000429427 GGT6Q6P531 493 aa28.25■■■□□ 2.11
SSR4P1-202ENST00000429427 CLTCQ00610 1675 aaKnown RBP28.25■■■□□ 2.11
SSR4P1-202ENST00000429427 PREX1Q8TCU6 1659 aa28.24■■■□□ 2.11
SSR4P1-202ENST00000429427 CROCC2H7BZ55 1655 aa28.23■■■□□ 2.11
SSR4P1-202ENST00000429427 ESF1Q9H501 851 aaKnown RBP28.23■■■□□ 2.11
SSR4P1-202ENST00000429427 ZMYM3Q14202 1370 aa28.22■■■□□ 2.11
SSR4P1-202ENST00000429427 SHANK2Q9UPX8 1470 aa28.21■■■□□ 2.11
SSR4P1-202ENST00000429427 DNMT1P26358 1616 aaKnown RBP28.21■■■□□ 2.11
SSR4P1-202ENST00000429427 DAPK1P53355 1430 aa28.2■■■□□ 2.11
SSR4P1-202ENST00000429427 KIF3BO15066 747 aa28.2■■■□□ 2.1
SSR4P1-202ENST00000429427 PPP6R1Q9UPN7 881 aa28.15■■■□□ 2.1
SSR4P1-202ENST00000429427 NPATQ14207 1427 aa28.14■■■□□ 2.1
SSR4P1-202ENST00000429427 PTPRKQ15262 1439 aa28.14■■■□□ 2.1
SSR4P1-202ENST00000429427 UHRF1BP1Q6BDS2 1440 aa28.14■■■□□ 2.1
SSR4P1-202ENST00000429427 RNF17Q9BXT8 1623 aaKnown RBP28.14■■■□□ 2.09
SSR4P1-202ENST00000429427 SETD1BQ9UPS6 1966 aaKnown RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms