RNA–Protein interactions for RNA: ENST00000428691.5

KCMF1-202, Transcript of potassium channel modulatory factor 1, humanhuman

TSL 2

Gene KCMF1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1-202ENST00000428691 PREX2Q70Z35 1606 aa29.58■■■□□ 2.33
KCMF1-202ENST00000428691 ARHGEF40Q8TER5 1519 aa29.58■■■□□ 2.33
KCMF1-202ENST00000428691 CDC42BPBQ9Y5S2 1711 aa29.58■■■□□ 2.33
KCMF1-202ENST00000428691 POGZQ7Z3K3 1410 aa29.56■■■□□ 2.32
KCMF1-202ENST00000428691 SCAPERQ9BY12 1400 aa29.56■■■□□ 2.32
KCMF1-202ENST00000428691 CDC42BPAQ5VT25 1732 aa29.53■■■□□ 2.32
KCMF1-202ENST00000428691 MAGI2Q86UL8 1455 aa29.53■■■□□ 2.32
KCMF1-202ENST00000428691 ZFYVE16Q7Z3T8 1539 aa29.48■■■□□ 2.31
KCMF1-202ENST00000428691 ZNF518AQ6AHZ1 1483 aa29.46■■■□□ 2.31
KCMF1-202ENST00000428691 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
KCMF1-202ENST00000428691 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.31
KCMF1-202ENST00000428691 ABCC1P33527 1531 aa29.45■■■□□ 2.3
KCMF1-202ENST00000428691 VPS8Q8N3P4 1428 aa29.45■■■□□ 2.3
KCMF1-202ENST00000428691 KDM5CP41229 1560 aa29.44■■■□□ 2.3
KCMF1-202ENST00000428691 GPATCH8Q9UKJ3 1502 aaKnown RBP29.43■■■□□ 2.3
KCMF1-202ENST00000428691 YEATS2Q9ULM3 1422 aa29.43■■■□□ 2.3
KCMF1-202ENST00000428691 ADAMTSL3P82987 1691 aa29.41■■■□□ 2.3
KCMF1-202ENST00000428691 BCORL1Q5H9F3 1711 aa29.4■■■□□ 2.3
KCMF1-202ENST00000428691 ITSN2Q9NZM3 1697 aa29.4■■■□□ 2.3
KCMF1-202ENST00000428691 ARHGEF12Q9NZN5 1544 aa29.37■■■□□ 2.29
KCMF1-202ENST00000428691 TIAM1Q13009 1591 aa29.36■■■□□ 2.29
KCMF1-202ENST00000428691 SAMD9LQ8IVG5 1584 aa29.35■■■□□ 2.29
KCMF1-202ENST00000428691 HECW2Q9P2P5 1572 aa29.35■■■□□ 2.29
KCMF1-202ENST00000428691 CCNB3Q8WWL7 1395 aa29.34■■■□□ 2.29
KCMF1-202ENST00000428691 SIGLEC1Q9BZZ2 1709 aa29.34■■■□□ 2.29
KCMF1-202ENST00000428691 AFAP1Q8N556 730 aa29.33■■■□□ 2.29
KCMF1-202ENST00000428691 ATP10AO60312 1499 aa29.32■■■□□ 2.28
KCMF1-202ENST00000428691 MLH3Q9UHC1 1453 aa29.32■■■□□ 2.28
KCMF1-202ENST00000428691 TRAPPC8Q9Y2L5 1435 aa29.31■■■□□ 2.28
KCMF1-202ENST00000428691 ARID4BQ4LE39 1312 aaPredicted RBP29.31■■■□□ 2.28
KCMF1-202ENST00000428691 C9orf84Q5VXU9 1444 aa29.3■■■□□ 2.28
KCMF1-202ENST00000428691 MAP3K1Q13233 1512 aa29.29■■■□□ 2.28
KCMF1-202ENST00000428691 PLEKHH2Q8IVE3 1493 aa29.29■■■□□ 2.28
KCMF1-202ENST00000428691 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
KCMF1-202ENST00000428691 KIAA1107Q9UPP5 1409 aa29.28■■■□□ 2.28
KCMF1-202ENST00000428691 MADDQ8WXG6 1647 aa29.27■■■□□ 2.28
KCMF1-202ENST00000428691 SYCP2Q9BX26 1530 aa29.27■■■□□ 2.28
KCMF1-202ENST00000428691 CFDP1Q9UEE9 299 aaPredicted RBP29.27■■■□□ 2.28
KCMF1-202ENST00000428691 DIP2CQ9Y2E4 1556 aa29.26■■■□□ 2.28
KCMF1-202ENST00000428691 REREQ9P2R6 1566 aa29.26■■■□□ 2.27
KCMF1-202ENST00000428691 PTPRMP28827 1452 aa29.24■■■□□ 2.27
KCMF1-202ENST00000428691 ABCA6Q8N139 1617 aa29.23■■■□□ 2.27
KCMF1-202ENST00000428691 NCOA2Q15596 1464 aa29.23■■■□□ 2.27
KCMF1-202ENST00000428691 ZNF777Q9ULD5 760 aaPredicted RBP29.23■■■□□ 2.27
KCMF1-202ENST00000428691 LRRC9Q6ZRR7 1453 aa29.23■■■□□ 2.27
KCMF1-202ENST00000428691 KIDINS220Q9ULH0 1771 aa29.22■■■□□ 2.27
KCMF1-202ENST00000428691 RIMS1Q86UR5 1692 aaKnown RBP29.17■■■□□ 2.26
KCMF1-202ENST00000428691 HNRNPMP52272 730 aaKnown RBP eCLIP29.15■■■□□ 2.261e-6■■■■□ 22.6
KCMF1-202ENST00000428691 MYT1LQ9UL68 1186 aa29.14■■■□□ 2.26
KCMF1-202ENST00000428691 AGLP35573 1532 aa29.14■■■□□ 2.25
KCMF1-202ENST00000428691 FER1L4A9Z1Z3 1794 aa29.13■■■□□ 2.25
KCMF1-202ENST00000428691 INO80Q9ULG1 1556 aaPredicted RBP29.13■■■□□ 2.25
KCMF1-202ENST00000428691 MBD5Q9P267 1494 aa29.12■■■□□ 2.25
KCMF1-202ENST00000428691 ATP7AQ04656 1500 aa29.1■■■□□ 2.25
KCMF1-202ENST00000428691 SPAG9O60271 1321 aaKnown RBP29.1■■■□□ 2.25
KCMF1-202ENST00000428691 ZNF644Q9H582 1327 aaPredicted RBP29.1■■■□□ 2.25
KCMF1-202ENST00000428691 KANK4Q5T7N3 995 aaPredicted RBP29.08■■■□□ 2.25
KCMF1-202ENST00000428691 CAMSAP2Q08AD1 1489 aa29.06■■■□□ 2.24
KCMF1-202ENST00000428691 MLECQ14165 292 aa29.06■■■□□ 2.24
KCMF1-202ENST00000428691 PLXNC1O60486 1568 aa29.01■■■□□ 2.24
KCMF1-202ENST00000428691 RTEL1-TNFRSF6BF6WH68 1400 aa29.01■■■□□ 2.23
KCMF1-202ENST00000428691 CCDC141Q6ZP82 1450 aa29■■■□□ 2.23
KCMF1-202ENST00000428691 ARHGEF5Q12774 1597 aa29■■■□□ 2.23
KCMF1-202ENST00000428691 ADGBQ8N7X0 1667 aa28.99■■■□□ 2.23
KCMF1-202ENST00000428691 APLP2Q06481 763 aa28.98■■■□□ 2.23
KCMF1-202ENST00000428691 RSPH4AQ5TD94 716 aa28.98■■■□□ 2.23
KCMF1-202ENST00000428691 MYOM3Q5VTT5 1437 aa28.97■■■□□ 2.23
KCMF1-202ENST00000428691 MIA2Q96PC5 1412 aa28.97■■■□□ 2.23
KCMF1-202ENST00000428691 A2MP01023 1474 aa28.97■■■□□ 2.23
KCMF1-202ENST00000428691 LMTK3Q96Q04 1460 aa28.91■■■□□ 2.22
KCMF1-202ENST00000428691 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
KCMF1-202ENST00000428691 MAST1Q9Y2H9 1570 aa28.85■■■□□ 2.21
KCMF1-202ENST00000428691 C3P01024 1663 aa28.85■■■□□ 2.21
KCMF1-202ENST00000428691 MROH2AA6NES4 1674 aa28.84■■■□□ 2.21
KCMF1-202ENST00000428691 DHX29Q7Z478 1369 aaKnown RBP28.84■■■□□ 2.21
KCMF1-202ENST00000428691 SETD1BQ9UPS6 1966 aaKnown RBP28.82■■■□□ 2.2
KCMF1-202ENST00000428691 PLPPR3Q6T4P5 718 aa28.82■■■□□ 2.2
KCMF1-202ENST00000428691 PREX1Q8TCU6 1659 aa28.81■■■□□ 2.2
KCMF1-202ENST00000428691 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
KCMF1-202ENST00000428691 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
KCMF1-202ENST00000428691 ESF1Q9H501 851 aaKnown RBP28.81■■■□□ 2.2
KCMF1-202ENST00000428691 PTPN23Q9H3S7 1636 aa28.8■■■□□ 2.2
KCMF1-202ENST00000428691 CEBPAP49715 358 aaPredicted RBP28.8■■■□□ 2.2
KCMF1-202ENST00000428691 FGD6Q6ZV73 1430 aa28.77■■■□□ 2.2
KCMF1-202ENST00000428691 TCOF1Q13428 1488 aaKnown RBP28.77■■■□□ 2.2
KCMF1-202ENST00000428691 PPP6R1Q9UPN7 881 aa28.76■■■□□ 2.19
KCMF1-202ENST00000428691 CLTCQ00610 1675 aaKnown RBP28.74■■■□□ 2.19
KCMF1-202ENST00000428691 CROCC2H7BZ55 1655 aa28.74■■■□□ 2.19
KCMF1-202ENST00000428691 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
KCMF1-202ENST00000428691 FAM135AQ9P2D6 1515 aa28.72■■■□□ 2.19
KCMF1-202ENST00000428691 GGT6Q6P531 493 aa28.7■■■□□ 2.18
KCMF1-202ENST00000428691 ZMYM3Q14202 1370 aa28.7■■■□□ 2.18
KCMF1-202ENST00000428691 NPATQ14207 1427 aa28.69■■■□□ 2.18
KCMF1-202ENST00000428691 DNMT1P26358 1616 aaKnown RBP28.69■■■□□ 2.18
KCMF1-202ENST00000428691 ABCC5O15440 1437 aa28.69■■■□□ 2.18
KCMF1-202ENST00000428691 UHRF1BP1Q6BDS2 1440 aa28.69■■■□□ 2.18
KCMF1-202ENST00000428691 EIF2AK4Q9P2K8 1649 aaKnown RBP28.66■■■□□ 2.18
KCMF1-202ENST00000428691 KIF3BO15066 747 aa28.65■■■□□ 2.18
KCMF1-202ENST00000428691 HSPA2P54652 639 aa28.65■■■□□ 2.18
KCMF1-202ENST00000428691 DAPK1P53355 1430 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms