RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 CFAP74Q9C0B2 1584 aa24.8■■□□□ 1.56
PDE6D-203ENST00000428104 ARHGEF12Q9NZN5 1544 aa24.8■■□□□ 1.56
PDE6D-203ENST00000428104 HECW1Q76N89 1606 aa24.79■■□□□ 1.56
PDE6D-203ENST00000428104 PLEKHD1A6NEE1 506 aa24.79■■□□□ 1.56
PDE6D-203ENST00000428104 SAMD9Q5K651 1589 aa24.79■■□□□ 1.56
PDE6D-203ENST00000428104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.77■■□□□ 1.56
PDE6D-203ENST00000428104 UHRF1BP1Q6BDS2 1440 aa24.75■■□□□ 1.55
PDE6D-203ENST00000428104 SCAPERQ9BY12 1400 aa24.72■■□□□ 1.55
PDE6D-203ENST00000428104 ATP10AO60312 1499 aa24.71■■□□□ 1.55
PDE6D-203ENST00000428104 PTPRTO14522 1441 aa24.71■■□□□ 1.55
PDE6D-203ENST00000428104 C9orf84Q5VXU9 1444 aa24.7■■□□□ 1.55
PDE6D-203ENST00000428104 LTBP4Q8N2S1 1624 aa24.68■■□□□ 1.54
PDE6D-203ENST00000428104 RANGAP1P46060 587 aaPredicted RBP24.67■■□□□ 1.54
PDE6D-203ENST00000428104 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
PDE6D-203ENST00000428104 PLCH2O75038 1416 aa24.61■■□□□ 1.53
PDE6D-203ENST00000428104 CDK13Q14004 1512 aaKnown RBP24.54■■□□□ 1.52
PDE6D-203ENST00000428104 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
PDE6D-203ENST00000428104 SETD1BQ9UPS6 1966 aaKnown RBP24.53■■□□□ 1.52
PDE6D-203ENST00000428104 UBAP1LF5GYI3 381 aa24.52■■□□□ 1.52
PDE6D-203ENST00000428104 EFCAB2Q5VUJ9 269 aa24.52■■□□□ 1.52
PDE6D-203ENST00000428104 AFAP1Q8N556 730 aa24.5■■□□□ 1.51
PDE6D-203ENST00000428104 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
PDE6D-203ENST00000428104 TRAPPC8Q9Y2L5 1435 aa24.49■■□□□ 1.51
PDE6D-203ENST00000428104 ZNF518AQ6AHZ1 1483 aa24.49■■□□□ 1.51
PDE6D-203ENST00000428104 C3P01024 1663 aa24.49■■□□□ 1.51
PDE6D-203ENST00000428104 MYT1LQ9UL68 1186 aa24.48■■□□□ 1.51
PDE6D-203ENST00000428104 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
PDE6D-203ENST00000428104 DIP2CQ9Y2E4 1556 aa24.46■■□□□ 1.51
PDE6D-203ENST00000428104 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
PDE6D-203ENST00000428104 KDM5CP41229 1560 aa24.44■■□□□ 1.5
PDE6D-203ENST00000428104 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
PDE6D-203ENST00000428104 REREQ9P2R6 1566 aa24.41■■□□□ 1.5
PDE6D-203ENST00000428104 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
PDE6D-203ENST00000428104 MYO5CQ9NQX4 1742 aa24.39■■□□□ 1.5
PDE6D-203ENST00000428104 ABCA6Q8N139 1617 aa24.38■■□□□ 1.49
PDE6D-203ENST00000428104 ARHGAP5Q13017 1502 aa24.37■■□□□ 1.49
PDE6D-203ENST00000428104 AGLP35573 1532 aa24.35■■□□□ 1.49
PDE6D-203ENST00000428104 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
PDE6D-203ENST00000428104 ATP1B4Q9UN42 357 aaPredicted RBP24.35■■□□□ 1.49
PDE6D-203ENST00000428104 KIF14Q15058 1648 aa24.35■■□□□ 1.49
PDE6D-203ENST00000428104 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
PDE6D-203ENST00000428104 HSPA1LP34931 641 aa24.33■■□□□ 1.49
PDE6D-203ENST00000428104 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
PDE6D-203ENST00000428104 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
PDE6D-203ENST00000428104 NPATQ14207 1427 aa24.3■■□□□ 1.48
PDE6D-203ENST00000428104 CDK11AQ9UQ88 783 aaPredicted RBP24.28■■□□□ 1.48
PDE6D-203ENST00000428104 PIP4K2BP78356 416 aa24.27■■□□□ 1.48
PDE6D-203ENST00000428104 PKD2Q13563 968 aa24.25■■□□□ 1.47
PDE6D-203ENST00000428104 TROQ12816 1431 aaPredicted RBP24.25■■□□□ 1.47
PDE6D-203ENST00000428104 ZMYM3Q14202 1370 aa24.24■■□□□ 1.47
PDE6D-203ENST00000428104 PLA2R1Q13018 1463 aa24.22■■□□□ 1.47
PDE6D-203ENST00000428104 TCOF1Q13428 1488 aaKnown RBP24.22■■□□□ 1.47
PDE6D-203ENST00000428104 PPP6R1Q9UPN7 881 aa24.21■■□□□ 1.47
PDE6D-203ENST00000428104 PHF23Q9BUL5 403 aaPredicted RBP24.2■■□□□ 1.46
PDE6D-203ENST00000428104 ABCC1P33527 1531 aa24.2■■□□□ 1.46
PDE6D-203ENST00000428104 CLIP1P30622 1438 aa24.18■■□□□ 1.46
PDE6D-203ENST00000428104 FMN1Q68DA7 1419 aa24.18■■□□□ 1.46
PDE6D-203ENST00000428104 MROH2AA6NES4 1674 aa24.18■■□□□ 1.46
PDE6D-203ENST00000428104 KIDINS220Q9ULH0 1771 aa24.17■■□□□ 1.46
PDE6D-203ENST00000428104 MYO3AQ8NEV4 1616 aa24.16■■□□□ 1.46
PDE6D-203ENST00000428104 CEP170BQ9Y4F5 1589 aaPredicted RBP24.16■■□□□ 1.46
PDE6D-203ENST00000428104 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
PDE6D-203ENST00000428104 TOM1O60784 492 aa24.15■■□□□ 1.46
PDE6D-203ENST00000428104 EEA1Q15075 1411 aa24.15■■□□□ 1.46
PDE6D-203ENST00000428104 ZNF142P52746 1687 aaPredicted RBP24.15■■□□□ 1.46
PDE6D-203ENST00000428104 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
PDE6D-203ENST00000428104 PTPRKQ15262 1439 aa24.12■■□□□ 1.45
PDE6D-203ENST00000428104 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
PDE6D-203ENST00000428104 CLTCQ00610 1675 aaKnown RBP24.08■■□□□ 1.44
PDE6D-203ENST00000428104 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
PDE6D-203ENST00000428104 SAMD9LQ8IVG5 1584 aa24.07■■□□□ 1.44
PDE6D-203ENST00000428104 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
PDE6D-203ENST00000428104 CPS1P31327 1500 aa24.05■■□□□ 1.44
PDE6D-203ENST00000428104 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
PDE6D-203ENST00000428104 SHANK2Q9UPX8 1470 aa24.04■■□□□ 1.44
PDE6D-203ENST00000428104 SPAG9O60271 1321 aaKnown RBP24.04■■□□□ 1.44
PDE6D-203ENST00000428104 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
PDE6D-203ENST00000428104 GGT6Q6P531 493 aa24.02■■□□□ 1.44
PDE6D-203ENST00000428104 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
PDE6D-203ENST00000428104 ZNF777Q9ULD5 760 aaPredicted RBP24.01■■□□□ 1.43
PDE6D-203ENST00000428104 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
PDE6D-203ENST00000428104 ALKQ9UM73 1620 aa23.99■■□□□ 1.43
PDE6D-203ENST00000428104 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
PDE6D-203ENST00000428104 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
PDE6D-203ENST00000428104 SYCP2Q9BX26 1530 aa23.98■■□□□ 1.43
PDE6D-203ENST00000428104 PLXNC1O60486 1568 aa23.98■■□□□ 1.43
PDE6D-203ENST00000428104 NEURL4Q96JN8 1562 aa23.98■■□□□ 1.43
PDE6D-203ENST00000428104 HNRNPMP52272 730 aaKnown RBP eCLIP23.97■■□□□ 1.43
PDE6D-203ENST00000428104 A2MP01023 1474 aa23.96■■□□□ 1.43
PDE6D-203ENST00000428104 ATP7AQ04656 1500 aa23.95■■□□□ 1.43
PDE6D-203ENST00000428104 CDC42BPAQ5VT25 1732 aa23.93■■□□□ 1.42
PDE6D-203ENST00000428104 RGS17Q9UGC6 210 aaPredicted RBP23.93■■□□□ 1.42
PDE6D-203ENST00000428104 VWDEQ8N2E2 1590 aa23.91■■□□□ 1.42
PDE6D-203ENST00000428104 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
PDE6D-203ENST00000428104 INO80Q9ULG1 1556 aaPredicted RBP23.89■■□□□ 1.41
PDE6D-203ENST00000428104 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
PDE6D-203ENST00000428104 TNRQ92752 1358 aa23.88■■□□□ 1.41
PDE6D-203ENST00000428104 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
PDE6D-203ENST00000428104 ANKLE2Q86XL3 938 aa23.87■■□□□ 1.41
PDE6D-203ENST00000428104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms