RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CIZ1Q9ULV3 898 aaPredicted RBP7.67□□□□□ -1.18
VTI1BP4-201ENST00000427516 PPM1GO15355 546 aaPredicted RBP7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 SEC24BO95487 1268 aa7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 ZNF467Q7Z7K2 595 aaPredicted RBP7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 CCDC136Q96JN2 1154 aa7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 SALL2Q9Y467 1007 aaPredicted RBP7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 GOLGA3Q08378 1498 aa7.66□□□□□ -1.18
VTI1BP4-201ENST00000427516 MAMSTRQ6ZN01 415 aa7.65□□□□□ -1.18
VTI1BP4-201ENST00000427516 ANP32CO43423 234 aa7.64□□□□□ -1.19
VTI1BP4-201ENST00000427516 IRX5P78411 483 aaPredicted RBP7.64□□□□□ -1.19
VTI1BP4-201ENST00000427516 IPO9Q96P70 1041 aaKnown RBP7.62□□□□□ -1.19
VTI1BP4-201ENST00000427516 CEP164Q9UPV0 1460 aa7.62□□□□□ -1.19
VTI1BP4-201ENST00000427516 PSEN1P49768 467 aa7.61□□□□□ -1.19
VTI1BP4-201ENST00000427516 SCUBE2Q9NQ36 999 aa7.61□□□□□ -1.19
VTI1BP4-201ENST00000427516 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
VTI1BP4-201ENST00000427516 CUX2O14529 1486 aa7.6□□□□□ -1.19
VTI1BP4-201ENST00000427516 PLCG2P16885 1265 aa7.59□□□□□ -1.19
VTI1BP4-201ENST00000427516 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
VTI1BP4-201ENST00000427516 BAZ1BQ9UIG0 1483 aaKnown RBP7.59□□□□□ -1.19
VTI1BP4-201ENST00000427516 VPS8Q8N3P4 1428 aa7.59□□□□□ -1.19
VTI1BP4-201ENST00000427516 DHX57Q6P158 1386 aaKnown RBP7.59□□□□□ -1.2
VTI1BP4-201ENST00000427516 WASHC2CQ9Y4E1 1318 aa7.58□□□□□ -1.2
VTI1BP4-201ENST00000427516 PDAP1Q13442 181 aaKnown RBP7.58□□□□□ -1.2
VTI1BP4-201ENST00000427516 NBR1Q14596 966 aa7.58□□□□□ -1.2
VTI1BP4-201ENST00000427516 FAM43AQ8N2R8 423 aa7.58□□□□□ -1.2
VTI1BP4-201ENST00000427516 WASHC2AQ641Q2 1341 aa7.57□□□□□ -1.2
VTI1BP4-201ENST00000427516 KIF21BO75037 1637 aa7.57□□□□□ -1.2
VTI1BP4-201ENST00000427516 DDRGK1Q96HY6 314 aa7.57□□□□□ -1.2
VTI1BP4-201ENST00000427516 NEFMP07197 916 aa7.56□□□□□ -1.2
VTI1BP4-201ENST00000427516 RRP9O43818 475 aaKnown RBP7.55□□□□□ -1.2
VTI1BP4-201ENST00000427516 EIF4G1Q04637 1599 aaKnown RBP7.54□□□□□ -1.2
VTI1BP4-201ENST00000427516 DCAF8L2P0C7V8 631 aa7.54□□□□□ -1.2
VTI1BP4-201ENST00000427516 MKRN3Q13064 507 aaKnown RBP7.54□□□□□ -1.2
VTI1BP4-201ENST00000427516 PDCD7Q8N8D1 485 aaKnown RBP7.54□□□□□ -1.2
VTI1BP4-201ENST00000427516 BAZ1AQ9NRL2 1556 aaPredicted RBP7.54□□□□□ -1.2
VTI1BP4-201ENST00000427516 ITGAEP38570 1179 aa7.53□□□□□ -1.2
VTI1BP4-201ENST00000427516 GOLGA2Q08379 1002 aa7.53□□□□□ -1.2
VTI1BP4-201ENST00000427516 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
VTI1BP4-201ENST00000427516 ILDR1Q86SU0 546 aaPredicted RBP7.53□□□□□ -1.2
VTI1BP4-201ENST00000427516 SMARCA2P51531 1590 aa7.53□□□□□ -1.2
VTI1BP4-201ENST00000427516 NACADO15069 1562 aa7.52□□□□□ -1.21
VTI1BP4-201ENST00000427516 RNF25Q96BH1 459 aaPredicted RBP7.52□□□□□ -1.21
VTI1BP4-201ENST00000427516 UBTFP17480 764 aaKnown RBP7.51□□□□□ -1.21
VTI1BP4-201ENST00000427516 CABP2Q9NPB3 220 aa7.51□□□□□ -1.21
VTI1BP4-201ENST00000427516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.51□□□□□ -1.21
VTI1BP4-201ENST00000427516 CLIP1P30622 1438 aa7.51□□□□□ -1.21
VTI1BP4-201ENST00000427516 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
VTI1BP4-201ENST00000427516 IL27Q8NEV9 243 aa7.5□□□□□ -1.21
VTI1BP4-201ENST00000427516 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.5□□□□□ -1.21
VTI1BP4-201ENST00000427516 SLAIN1Q8ND83 568 aa7.49□□□□□ -1.21
VTI1BP4-201ENST00000427516 FAM163AQ96GL9 167 aaPredicted RBP7.49□□□□□ -1.21
VTI1BP4-201ENST00000427516 POTEMA6NI47 508 aa7.48□□□□□ -1.21
VTI1BP4-201ENST00000427516 RIOK3O14730 519 aaKnown RBP7.48□□□□□ -1.21
VTI1BP4-201ENST00000427516 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
VTI1BP4-201ENST00000427516 RRBP1Q9P2E9 1410 aaKnown RBP7.48□□□□□ -1.21
VTI1BP4-201ENST00000427516 DPY19L2Q6NUT2 758 aa7.47□□□□□ -1.21
VTI1BP4-201ENST00000427516 POTEGQ6S5H5 508 aa7.47□□□□□ -1.21
VTI1BP4-201ENST00000427516 TCERG1O14776 1098 aaKnown RBP7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 PPP1R15AO75807 674 aaPredicted RBP7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 HSP90AA1P07900 732 aaKnown RBP7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 MS4A1P11836 297 aa7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 RANGAP1P46060 587 aaPredicted RBP7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 HSP90AA2PQ14568 343 aaPredicted RBP7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 L3MBTL3Q96JM7 780 aaPredicted RBP7.46□□□□□ -1.22
VTI1BP4-201ENST00000427516 HNRNPUQ00839 825 aaKnown RBP eCLIP7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 VSIG10Q8N0Z9 540 aa7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 EFCAB3Q8N7B9 438 aa7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 TRIM52Q96A61 297 aa7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 RTN4Q9NQC3 1192 aaKnown RBP7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 ZBED9Q6R2W3 1325 aa7.45□□□□□ -1.22
VTI1BP4-201ENST00000427516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.44□□□□□ -1.22
VTI1BP4-201ENST00000427516 VGFO15240 615 aaPredicted RBP7.44□□□□□ -1.22
VTI1BP4-201ENST00000427516 ZFP91Q96JP5 570 aaPredicted RBP7.44□□□□□ -1.22
VTI1BP4-201ENST00000427516 ZMYND15Q9H091 742 aa7.44□□□□□ -1.22
VTI1BP4-201ENST00000427516 DDX10Q13206 875 aaKnown RBP7.43□□□□□ -1.22
VTI1BP4-201ENST00000427516 PKD2Q13563 968 aa7.43□□□□□ -1.22
VTI1BP4-201ENST00000427516 CENPJQ9HC77 1338 aaPredicted RBP7.43□□□□□ -1.22
VTI1BP4-201ENST00000427516 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
VTI1BP4-201ENST00000427516 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
VTI1BP4-201ENST00000427516 PEG3Q9GZU2 1588 aa7.42□□□□□ -1.22
VTI1BP4-201ENST00000427516 MAP7D2Q96T17 732 aa7.41□□□□□ -1.22
VTI1BP4-201ENST00000427516 ARID4BQ4LE39 1312 aaPredicted RBP7.41□□□□□ -1.22
VTI1BP4-201ENST00000427516 CCNB3Q8WWL7 1395 aa7.41□□□□□ -1.22
VTI1BP4-201ENST00000427516 PNNQ9H307 717 aaKnown RBP7.4□□□□□ -1.22
VTI1BP4-201ENST00000427516 SCRIBQ14160 1630 aa7.4□□□□□ -1.22
VTI1BP4-201ENST00000427516 ABCC8Q09428 1581 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 MAP3K1Q13233 1512 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 ERICH3Q5RHP9 1530 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 CCDC88BA6NC98 1476 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 FHAD1B1AJZ9 1412 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 SMG6Q86US8 1419 aaKnown RBP7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 SOX12O15370 315 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 ST18O60284 1047 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 C3orf67Q6ZVT6 689 aa7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 MTERF4Q7Z6M4 381 aaKnown RBP7.39□□□□□ -1.23
VTI1BP4-201ENST00000427516 BOLA1Q9Y3E2 137 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms